RNA–Protein interactions for RNA: ENST00000561431.1

LRRC28-222, Transcript of leucine rich repeat containing 28, humanhuman

TSL 3

Gene LRRC28, Length 754 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-222ENST00000561431 KRT78Q8N1N4 520 aa4.72□□□□□ -1.65
LRRC28-222ENST00000561431 SLC15A4Q8N697 577 aa4.72□□□□□ -1.65
LRRC28-222ENST00000561431 OTUD6BQ8N6M0 293 aa4.72□□□□□ -1.65
LRRC28-222ENST00000561431 PDPRQ8NCN5 879 aa4.72□□□□□ -1.65
LRRC28-222ENST00000561431 FAM46DQ8NEK8 389 aa4.72□□□□□ -1.65
LRRC28-222ENST00000561431 DNERQ8NFT8 737 aa4.72□□□□□ -1.65
LRRC28-222ENST00000561431 OR56A1Q8NGH5 318 aa4.72□□□□□ -1.65
LRRC28-222ENST00000561431 PHKBQ93100 1093 aa4.72□□□□□ -1.65
LRRC28-222ENST00000561431 MRGPRX1Q96LB2 322 aa4.72□□□□□ -1.65
LRRC28-222ENST00000561431 KLHL32Q96NJ5 620 aa4.72□□□□□ -1.65
LRRC28-222ENST00000561431 STRBPQ96SI9 672 aaKnown RBP4.72□□□□□ -1.65
LRRC28-222ENST00000561431 CNPPD1Q9BV87 410 aa4.72□□□□□ -1.65
LRRC28-222ENST00000561431 TINAGL1Q9GZM7 467 aaPredicted RBP4.72□□□□□ -1.65
LRRC28-222ENST00000561431 BTBD1Q9H0C5 482 aa4.72□□□□□ -1.65
LRRC28-222ENST00000561431 RETREG1Q9H6L5 497 aa4.72□□□□□ -1.65
LRRC28-222ENST00000561431 NLRC4Q9NPP4 1024 aa4.72□□□□□ -1.65
LRRC28-222ENST00000561431 ZSCAN32Q9NX65 697 aa4.72□□□□□ -1.65
LRRC28-222ENST00000561431 ITGB1BP2Q9UKP3 347 aa4.72□□□□□ -1.65
LRRC28-222ENST00000561431 DAAM1Q9Y4D1 1078 aa4.72□□□□□ -1.65
LRRC28-222ENST00000561431 PLEKHM1Q9Y4G2 1056 aa4.72□□□□□ -1.65
LRRC28-222ENST00000561431 CEP83Q9Y592 693 aa4.72□□□□□ -1.65
LRRC28-222ENST00000561431 PLEKHG2Q9H7P9 1386 aa4.72□□□□□ -1.65
LRRC28-222ENST00000561431 IGSF1Q8N6C5 1336 aa4.72□□□□□ -1.65
LRRC28-222ENST00000561431 NPC1L1Q9UHC9 1359 aa4.71□□□□□ -1.66
LRRC28-222ENST00000561431 A0A1B0GTW7 788 aa4.71□□□□□ -1.66
LRRC28-222ENST00000561431 POM121BA6NF01 834 aa4.71□□□□□ -1.66
LRRC28-222ENST00000561431 MYO1FO00160 1098 aa4.71□□□□□ -1.66
LRRC28-222ENST00000561431 TOR1BO14657 336 aa4.71□□□□□ -1.66
LRRC28-222ENST00000561431 MUSKO15146 869 aa4.71□□□□□ -1.66
LRRC28-222ENST00000561431 FAM20BO75063 409 aa4.71□□□□□ -1.66
LRRC28-222ENST00000561431 RPS6KA4O75676 772 aa4.71□□□□□ -1.66
LRRC28-222ENST00000561431 RASSF9O75901 435 aa4.71□□□□□ -1.66
LRRC28-222ENST00000561431 PRSS23O95084 383 aa4.71□□□□□ -1.66
LRRC28-222ENST00000561431 GPANK1O95872 356 aa4.71□□□□□ -1.66
LRRC28-222ENST00000561431 HLA-DOAP06340 250 aa4.71□□□□□ -1.66
LRRC28-222ENST00000561431 SLC5A1P13866 664 aa4.71□□□□□ -1.66
LRRC28-222ENST00000561431 STT3AP46977 705 aa4.71□□□□□ -1.66
LRRC28-222ENST00000561431 PRIM2P49643 509 aa4.71□□□□□ -1.66
LRRC28-222ENST00000561431 HSD11B2P80365 405 aa4.71□□□□□ -1.66
LRRC28-222ENST00000561431 EIF4A2Q14240 407 aaKnown RBP4.71□□□□□ -1.66
LRRC28-222ENST00000561431 R3HDM1Q15032 1099 aaKnown RBP4.71□□□□□ -1.66
LRRC28-222ENST00000561431 CSRP2Q16527 193 aa4.71□□□□□ -1.66
LRRC28-222ENST00000561431 PREPLQ4J6C6 727 aaPredicted RBP4.71□□□□□ -1.66
LRRC28-222ENST00000561431 C3orf38Q5JPI3 329 aa4.71□□□□□ -1.66
LRRC28-222ENST00000561431 Q6ZSN1 163 aa4.71□□□□□ -1.66
LRRC28-222ENST00000561431 GDF7Q7Z4P5 450 aa4.71□□□□□ -1.66
LRRC28-222ENST00000561431 MORC1Q86VD1 984 aa4.71□□□□□ -1.66
LRRC28-222ENST00000561431 ZSCAN30Q86W11 494 aa4.71□□□□□ -1.66
LRRC28-222ENST00000561431 SYT12Q8IV01 421 aa4.71□□□□□ -1.66
LRRC28-222ENST00000561431 RHOT2Q8IXI1 618 aa4.71□□□□□ -1.66
LRRC28-222ENST00000561431 TTC30BQ8N4P2 665 aa4.71□□□□□ -1.66
LRRC28-222ENST00000561431 DNAJC5GQ8N7S2 189 aa4.71□□□□□ -1.66
LRRC28-222ENST00000561431 NSUN7Q8NE18 718 aaKnown RBP4.71□□□□□ -1.66
LRRC28-222ENST00000561431 MYRIPQ8NFW9 859 aa4.71□□□□□ -1.66
LRRC28-222ENST00000561431 EDAQ92838 391 aa4.71□□□□□ -1.66
LRRC28-222ENST00000561431 MOGAT1Q96PD6 335 aa4.71□□□□□ -1.66
LRRC28-222ENST00000561431 TRIB1Q96RU8 372 aa4.71□□□□□ -1.66
LRRC28-222ENST00000561431 TLR10Q9BXR5 811 aa4.71□□□□□ -1.66
LRRC28-222ENST00000561431 STK31Q9BXU1 1019 aa4.71□□□□□ -1.66
LRRC28-222ENST00000561431 TRIM54Q9BYV2 358 aa4.71□□□□□ -1.66
LRRC28-222ENST00000561431 GPR35Q9HC97 309 aa4.71□□□□□ -1.66
LRRC28-222ENST00000561431 KLHL11Q9NVR0 708 aa4.71□□□□□ -1.66
LRRC28-222ENST00000561431 CWC25Q9NXE8 425 aaPredicted RBP4.71□□□□□ -1.66
LRRC28-222ENST00000561431 POLG2Q9UHN1 485 aa4.71□□□□□ -1.66
LRRC28-222ENST00000561431 HDAC9Q9UKV0 1011 aa4.71□□□□□ -1.66
LRRC28-222ENST00000561431 MED16Q9Y2X0 877 aa4.71□□□□□ -1.66
LRRC28-222ENST00000561431 NOX1Q9Y5S8 564 aa4.71□□□□□ -1.66
LRRC28-222ENST00000561431 QSER1Q2KHR3 1735 aa4.71□□□□□ -1.66
LRRC28-222ENST00000561431 XDHP47989 1333 aa4.71□□□□□ -1.66
LRRC28-222ENST00000561431 PCDH11XQ9BZA7 1347 aa4.71□□□□□ -1.66
LRRC28-222ENST00000561431 PCDH11YQ9BZA8 1340 aa4.71□□□□□ -1.66
LRRC28-222ENST00000561431 C5P01031 1676 aa4.7□□□□□ -1.66
LRRC28-222ENST00000561431 ITGB4P16144 1822 aa4.7□□□□□ -1.66
LRRC28-222ENST00000561431 TUBGCP6Q96RT7 1819 aa4.7□□□□□ -1.66
LRRC28-222ENST00000561431 KDRP35968 1356 aa4.7□□□□□ -1.66
LRRC28-222ENST00000561431 KLRG2A4D1S0 409 aaPredicted RBP4.7□□□□□ -1.66
LRRC28-222ENST00000561431 PRSS29PA6NIE9 313 aa4.7□□□□□ -1.66
LRRC28-222ENST00000561431 DIRC3C9JPN6 131 aa4.7□□□□□ -1.66
LRRC28-222ENST00000561431 PARP1P09874 1014 aaKnown RBP4.7□□□□□ -1.66
LRRC28-222ENST00000561431 FCER1AP12319 257 aa4.7□□□□□ -1.66
LRRC28-222ENST00000561431 GCSHP23434 173 aa4.7□□□□□ -1.66
LRRC28-222ENST00000561431 UCP3P55916 312 aa4.7□□□□□ -1.66
LRRC28-222ENST00000561431 GRM1Q13255 1194 aa4.7□□□□□ -1.66
LRRC28-222ENST00000561431 CTBP1Q13363 440 aa4.7□□□□□ -1.66
LRRC28-222ENST00000561431 TXNRD1Q16881 649 aa4.7□□□□□ -1.66
LRRC28-222ENST00000561431 NRN1LQ496H8 165 aa4.7□□□□□ -1.66
LRRC28-222ENST00000561431 C10orf62Q5T681 223 aaPredicted RBP4.7□□□□□ -1.66
LRRC28-222ENST00000561431 AGAP9Q5VTM2 703 aa4.7□□□□□ -1.66
LRRC28-222ENST00000561431 FAM160B1Q5W0V3 765 aa4.7□□□□□ -1.66
LRRC28-222ENST00000561431 CCDC70Q6NSX1 233 aa4.7□□□□□ -1.66
LRRC28-222ENST00000561431 TAPT1Q6NXT6 567 aa4.7□□□□□ -1.66
LRRC28-222ENST00000561431 C1orf228Q6PIY5 440 aa4.7□□□□□ -1.66
LRRC28-222ENST00000561431 ANKRD23Q86SG2 305 aa4.7□□□□□ -1.66
LRRC28-222ENST00000561431 DPP9Q86TI2 863 aa4.7□□□□□ -1.66
LRRC28-222ENST00000561431 CFAP52Q8N1V2 620 aa4.7□□□□□ -1.66
LRRC28-222ENST00000561431 VPS37AQ8NEZ2 397 aa4.7□□□□□ -1.66
LRRC28-222ENST00000561431 IPCEF1Q8WWN9 437 aaPredicted RBP4.7□□□□□ -1.66
LRRC28-222ENST00000561431 RAPGEF4Q8WZA2 1011 aa4.7□□□□□ -1.66
LRRC28-222ENST00000561431 ZSWIM1Q9BR11 485 aa4.7□□□□□ -1.66
LRRC28-222ENST00000561431 UNKQ9C0B0 810 aaKnown RBP4.7□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms