RNA–Protein interactions for RNA: ENST00000561359.1

HERC1-213, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 3

Gene HERC1, Length 551 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-213ENST00000561359 MB21D2Q8IYB1 491 aaPredicted RBP5.79□□□□□ -1.48
HERC1-213ENST00000561359 CMTM8Q8IZV2 173 aa5.79□□□□□ -1.48
HERC1-213ENST00000561359 ALLCQ8N6M5 410 aa5.79□□□□□ -1.48
HERC1-213ENST00000561359 ZNF513Q8N8E2 541 aaPredicted RBP5.79□□□□□ -1.48
HERC1-213ENST00000561359 TRIML1Q8N9V2 468 aa5.79□□□□□ -1.48
HERC1-213ENST00000561359 TXNDC5Q8NBS9 432 aaKnown RBP5.79□□□□□ -1.48
HERC1-213ENST00000561359 APPL2Q8NEU8 664 aa5.79□□□□□ -1.48
HERC1-213ENST00000561359 ASAP3Q8TDY4 903 aa5.79□□□□□ -1.48
HERC1-213ENST00000561359 EDEM1Q92611 657 aa5.79□□□□□ -1.48
HERC1-213ENST00000561359 FGF11Q92914 225 aa5.79□□□□□ -1.48
HERC1-213ENST00000561359 PSMG2Q969U7 264 aa5.79□□□□□ -1.48
HERC1-213ENST00000561359 PPP1R10Q96QC0 940 aaKnown RBP5.79□□□□□ -1.48
HERC1-213ENST00000561359 ADPGKQ9BRR6 497 aa5.79□□□□□ -1.48
HERC1-213ENST00000561359 SLC46A2Q9BY10 475 aa5.79□□□□□ -1.48
HERC1-213ENST00000561359 ZDHHC5Q9C0B5 715 aa5.79□□□□□ -1.48
HERC1-213ENST00000561359 FAM124BQ9H5Z6 455 aaPredicted RBP5.79□□□□□ -1.48
HERC1-213ENST00000561359 C6orf50Q9HD87 102 aa5.79□□□□□ -1.48
HERC1-213ENST00000561359 SUSD2Q9UGT4 822 aa5.79□□□□□ -1.48
HERC1-213ENST00000561359 CCL26Q9Y258 94 aa5.79□□□□□ -1.48
HERC1-213ENST00000561359 ASB3Q9Y575 518 aa5.79□□□□□ -1.48
HERC1-213ENST00000561359 ADAMTS9Q9P2N4 1935 aa5.79□□□□□ -1.48
HERC1-213ENST00000561359 CABIN1Q9Y6J0 2220 aa5.79□□□□□ -1.48
HERC1-213ENST00000561359 RELNP78509 3460 aa5.79□□□□□ -1.48
HERC1-213ENST00000561359 USP9YO00507 2555 aaPredicted RBP5.78□□□□□ -1.48
HERC1-213ENST00000561359 TCRBV21S2A2A0A5A6 115 aa5.78□□□□□ -1.48
HERC1-213ENST00000561359 ANTXRLA6NF34 631 aa5.78□□□□□ -1.48
HERC1-213ENST00000561359 LRRIQ4A6NIV6 560 aa5.78□□□□□ -1.48
HERC1-213ENST00000561359 K7EQS6 105 aa5.78□□□□□ -1.48
HERC1-213ENST00000561359 PODXLO00592 558 aa5.78□□□□□ -1.48
HERC1-213ENST00000561359 SH2B2O14492 632 aaPredicted RBP5.78□□□□□ -1.48
HERC1-213ENST00000561359 N4BP3O15049 544 aa5.78□□□□□ -1.48
HERC1-213ENST00000561359 ADAMTS3O15072 1205 aa5.78□□□□□ -1.48
HERC1-213ENST00000561359 FLRT2O43155 660 aa5.78□□□□□ -1.48
HERC1-213ENST00000561359 TNFSF14O43557 240 aa5.78□□□□□ -1.48
HERC1-213ENST00000561359 CILPO75339 1184 aa5.78□□□□□ -1.48
HERC1-213ENST00000561359 SOAT2O75908 522 aa5.78□□□□□ -1.48
HERC1-213ENST00000561359 SMNDC1O75940 238 aaKnown RBP eCLIP5.78□□□□□ -1.48
HERC1-213ENST00000561359 CER1O95813 267 aa5.78□□□□□ -1.48
HERC1-213ENST00000561359 OR4Q2P0C623 313 aa5.78□□□□□ -1.48
HERC1-213ENST00000561359 MPSTP25325 297 aa5.78□□□□□ -1.48
HERC1-213ENST00000561359 MARCKSP29966 332 aaPredicted RBP5.78□□□□□ -1.48
HERC1-213ENST00000561359 YWHABP31946 246 aaKnown RBP5.78□□□□□ -1.48
HERC1-213ENST00000561359 MCM4P33991 863 aa5.78□□□□□ -1.48
HERC1-213ENST00000561359 HNF1BP35680 557 aa5.78□□□□□ -1.48
HERC1-213ENST00000561359 CCR10P46092 362 aa5.78□□□□□ -1.48
HERC1-213ENST00000561359 IFNAR2P48551 515 aa5.78□□□□□ -1.48
HERC1-213ENST00000561359 USP11P51784 963 aa5.78□□□□□ -1.48
HERC1-213ENST00000561359 POU5F1BQ06416 359 aa5.78□□□□□ -1.48
HERC1-213ENST00000561359 SYCP2LQ5T4T6 812 aa5.78□□□□□ -1.48
HERC1-213ENST00000561359 BROXQ5VW32 411 aa5.78□□□□□ -1.48
HERC1-213ENST00000561359 CEP135Q66GS9 1140 aa5.78□□□□□ -1.48
HERC1-213ENST00000561359 OTUD6AQ7L8S5 288 aa5.78□□□□□ -1.48
HERC1-213ENST00000561359 TMPRSS12Q86WS5 348 aa5.78□□□□□ -1.48
HERC1-213ENST00000561359 SLC41A1Q8IVJ1 513 aa5.78□□□□□ -1.48
HERC1-213ENST00000561359 MAB21L3Q8N8X9 362 aa5.78□□□□□ -1.48
HERC1-213ENST00000561359 USP13Q92995 863 aaPredicted RBP5.78□□□□□ -1.48
HERC1-213ENST00000561359 ATP2A3Q93084 1043 aa5.78□□□□□ -1.48
HERC1-213ENST00000561359 MED8Q96G25 268 aa5.78□□□□□ -1.48
HERC1-213ENST00000561359 NAF1Q96HR8 494 aaKnown RBP5.78□□□□□ -1.48
HERC1-213ENST00000561359 LGMNQ99538 433 aa5.78□□□□□ -1.48
HERC1-213ENST00000561359 LACRTQ9GZZ8 138 aa5.78□□□□□ -1.48
HERC1-213ENST00000561359 SLKQ9H2G2 1235 aaPredicted RBP5.78□□□□□ -1.48
HERC1-213ENST00000561359 PDZD7Q9H5P4 517 aa5.78□□□□□ -1.48
HERC1-213ENST00000561359 GAREM1Q9H706 876 aa5.78□□□□□ -1.48
HERC1-213ENST00000561359 IL21RQ9HBE5 538 aa5.78□□□□□ -1.48
HERC1-213ENST00000561359 TM7SF3Q9NS93 570 aa5.78□□□□□ -1.48
HERC1-213ENST00000561359 TDP1Q9NUW8 608 aa5.78□□□□□ -1.48
HERC1-213ENST00000561359 DUS2Q9NX74 493 aaKnown RBP5.78□□□□□ -1.48
HERC1-213ENST00000561359 WDR3Q9UNX4 943 aaKnown RBP eCLIP5.78□□□□□ -1.48
HERC1-213ENST00000561359 TRIM33Q9UPN9 1127 aa5.78□□□□□ -1.48
HERC1-213ENST00000561359 KIF26AQ9ULI4 1882 aaPredicted RBP5.77□□□□□ -1.49
HERC1-213ENST00000561359 SPTBN1Q01082 2364 aaKnown RBP5.77□□□□□ -1.49
HERC1-213ENST00000561359 SGK1O00141 431 aa5.77□□□□□ -1.49
HERC1-213ENST00000561359 NDUFS2O75306 463 aa5.77□□□□□ -1.49
HERC1-213ENST00000561359 VNN2O95498 520 aa5.77□□□□□ -1.49
HERC1-213ENST00000561359 ABL1P00519 1130 aa5.77□□□□□ -1.49
HERC1-213ENST00000561359 P4HBP07237 508 aaKnown RBP5.77□□□□□ -1.49
HERC1-213ENST00000561359 ZNF883P0CG24 379 aa5.77□□□□□ -1.49
HERC1-213ENST00000561359 MYF5P13349 255 aa5.77□□□□□ -1.49
HERC1-213ENST00000561359 LIG1P18858 919 aa5.77□□□□□ -1.49
HERC1-213ENST00000561359 MAOBP27338 520 aa5.77□□□□□ -1.49
HERC1-213ENST00000561359 GNA11P29992 359 aa5.77□□□□□ -1.49
HERC1-213ENST00000561359 MCM5P33992 734 aa5.77□□□□□ -1.49
HERC1-213ENST00000561359 MATKP42679 507 aa5.77□□□□□ -1.49
HERC1-213ENST00000561359 LIFRP42702 1097 aa5.77□□□□□ -1.49
HERC1-213ENST00000561359 EIF1AXP47813 144 aaKnown RBP5.77□□□□□ -1.49
HERC1-213ENST00000561359 TMPRSS3P57727 454 aa5.77□□□□□ -1.49
HERC1-213ENST00000561359 MRPS21P82921 87 aaKnown RBP5.77□□□□□ -1.49
HERC1-213ENST00000561359 HNRNPUQ00839 825 aaKnown RBP eCLIP5.77□□□□□ -1.49
HERC1-213ENST00000561359 PTH1RQ03431 593 aa5.77□□□□□ -1.49
HERC1-213ENST00000561359 SOX4Q06945 474 aaPredicted RBP5.77□□□□□ -1.49
HERC1-213ENST00000561359 SCRN1Q12765 414 aa5.77□□□□□ -1.49
HERC1-213ENST00000561359 MYO1EQ12965 1108 aa5.77□□□□□ -1.49
HERC1-213ENST00000561359 NFATC3Q12968 1075 aa5.77□□□□□ -1.49
HERC1-213ENST00000561359 MTF1Q14872 753 aa5.77□□□□□ -1.49
HERC1-213ENST00000561359 VEPH1Q14D04 833 aa5.77□□□□□ -1.49
HERC1-213ENST00000561359 EOGTQ5NDL2 527 aa5.77□□□□□ -1.49
HERC1-213ENST00000561359 PPP4R3AQ6IN85 833 aa5.77□□□□□ -1.49
HERC1-213ENST00000561359 ALKBH2Q6NS38 261 aa5.77□□□□□ -1.49
HERC1-213ENST00000561359 IGF2-ASQ6U949 168 aa5.77□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms