RNA–Protein interactions for RNA: ENST00000561305.1

CASC4-211, Transcript of cancer susceptibility 4, humanhuman

TSL 5

Gene CASC4, Length 353 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-211ENST00000561305 TMEM60Q9H2L4 133 aa4.5□□□□□ -1.69
CASC4-211ENST00000561305 TRNAU1APQ9NX07 287 aaKnown RBP4.5□□□□□ -1.69
CASC4-211ENST00000561305 GAR1Q9NY12 217 aaKnown RBP4.5□□□□□ -1.69
CASC4-211ENST00000561305 DNMT3BQ9UBC3 853 aaKnown RBP4.5□□□□□ -1.69
CASC4-211ENST00000561305 AFG3L2Q9Y4W6 797 aa4.5□□□□□ -1.69
CASC4-211ENST00000561305 MBD3L4A6NDZ8 208 aaPredicted RBP4.49□□□□□ -1.69
CASC4-211ENST00000561305 MBD3L3A6NE82 208 aaPredicted RBP4.49□□□□□ -1.69
CASC4-211ENST00000561305 TRIM38O00635 465 aa4.49□□□□□ -1.69
CASC4-211ENST00000561305 DSCR3O14972 297 aa4.49□□□□□ -1.69
CASC4-211ENST00000561305 TBX3O15119 743 aa4.49□□□□□ -1.69
CASC4-211ENST00000561305 CCP110O43303 1012 aa4.49□□□□□ -1.69
CASC4-211ENST00000561305 FGBP02675 491 aa4.49□□□□□ -1.69
CASC4-211ENST00000561305 APEHP13798 732 aaKnown RBP4.49□□□□□ -1.69
CASC4-211ENST00000561305 EPHA3P29320 983 aa4.49□□□□□ -1.69
CASC4-211ENST00000561305 PRKAR1BP31321 381 aa4.49□□□□□ -1.69
CASC4-211ENST00000561305 PLCD1P51178 756 aa4.49□□□□□ -1.69
CASC4-211ENST00000561305 TIRAPP58753 221 aa4.49□□□□□ -1.69
CASC4-211ENST00000561305 ANAPC15P60006 121 aa4.49□□□□□ -1.69
CASC4-211ENST00000561305 TIAL1Q01085 375 aaKnown RBP eCLIP4.49□□□□□ -1.69
CASC4-211ENST00000561305 LMAN2Q12907 356 aa4.49□□□□□ -1.69
CASC4-211ENST00000561305 TWIST1Q15672 202 aa4.49□□□□□ -1.69
CASC4-211ENST00000561305 INSCQ1MX18 579 aa4.49□□□□□ -1.69
CASC4-211ENST00000561305 MRPL10Q7Z7H8 261 aaKnown RBP4.49□□□□□ -1.69
CASC4-211ENST00000561305 KIAA0319LQ8IZA0 1049 aa4.49□□□□□ -1.69
CASC4-211ENST00000561305 NANOGP1Q8N7R0 232 aa4.49□□□□□ -1.69
CASC4-211ENST00000561305 DNAJB14Q8TBM8 379 aa4.49□□□□□ -1.69
CASC4-211ENST00000561305 SPSB4Q96A44 273 aa4.49□□□□□ -1.69
CASC4-211ENST00000561305 RUNDC1Q96C34 613 aa4.49□□□□□ -1.69
CASC4-211ENST00000561305 WACQ9BTA9 647 aa4.49□□□□□ -1.69
CASC4-211ENST00000561305 VN1R3Q9BXE9 311 aa4.49□□□□□ -1.69
CASC4-211ENST00000561305 TRIM36Q9NQ86 728 aa4.49□□□□□ -1.69
CASC4-211ENST00000561305 RGS17Q9UGC6 210 aaPredicted RBP4.49□□□□□ -1.69
CASC4-211ENST00000561305 USP22Q9UPT9 525 aa4.49□□□□□ -1.69
CASC4-211ENST00000561305 USP19O94966 1318 aa4.48□□□□□ -1.69
CASC4-211ENST00000561305 hCG_2014768A0A024R1R8 64 aa4.48□□□□□ -1.69
CASC4-211ENST00000561305 TRIM43BA6NCK2 446 aa4.48□□□□□ -1.69
CASC4-211ENST00000561305 H3BNC9 293 aa4.48□□□□□ -1.69
CASC4-211ENST00000561305 SOCS2O14508 198 aa4.48□□□□□ -1.69
CASC4-211ENST00000561305 CD3EAPO15446 510 aaKnown RBP4.48□□□□□ -1.69
CASC4-211ENST00000561305 CTNND1O60716 968 aaKnown RBP4.48□□□□□ -1.69
CASC4-211ENST00000561305 GCATO75600 419 aa4.48□□□□□ -1.69
CASC4-211ENST00000561305 SLC7A1P30825 629 aa4.48□□□□□ -1.69
CASC4-211ENST00000561305 UQCRC1P31930 480 aa4.48□□□□□ -1.69
CASC4-211ENST00000561305 DIO1P49895 249 aa4.48□□□□□ -1.69
CASC4-211ENST00000561305 EPHB1P54762 984 aa4.48□□□□□ -1.69
CASC4-211ENST00000561305 FHL1Q13642 323 aa4.48□□□□□ -1.69
CASC4-211ENST00000561305 ZNF268Q14587 947 aaPredicted RBP4.48□□□□□ -1.69
CASC4-211ENST00000561305 SWSAP1Q6NVH7 229 aa4.48□□□□□ -1.69
CASC4-211ENST00000561305 ZNF517Q6ZMY9 492 aaPredicted RBP4.48□□□□□ -1.69
CASC4-211ENST00000561305 TRIM43Q96BQ3 446 aaPredicted RBP4.48□□□□□ -1.69
CASC4-211ENST00000561305 PPP1R9BQ96SB3 815 aa4.48□□□□□ -1.69
CASC4-211ENST00000561305 C22orf23Q9BZE7 217 aa4.48□□□□□ -1.69
CASC4-211ENST00000561305 CAPN8A6NHC0 703 aa4.47□□□□□ -1.69
CASC4-211ENST00000561305 FRS3O43559 492 aa4.47□□□□□ -1.69
CASC4-211ENST00000561305 SPRY2O43597 315 aa4.47□□□□□ -1.69
CASC4-211ENST00000561305 MYBP10242 640 aa4.47□□□□□ -1.69
CASC4-211ENST00000561305 HTRA4P83105 476 aaPredicted RBP4.47□□□□□ -1.69
CASC4-211ENST00000561305 GHRHRQ02643 423 aa4.47□□□□□ -1.69
CASC4-211ENST00000561305 LARS2Q15031 903 aaKnown RBP4.47□□□□□ -1.69
CASC4-211ENST00000561305 NPY5RQ15761 445 aa4.47□□□□□ -1.69
CASC4-211ENST00000561305 ZNF260Q3ZCT1 412 aa4.47□□□□□ -1.69
CASC4-211ENST00000561305 C10orf25Q5T742 122 aa4.47□□□□□ -1.69
CASC4-211ENST00000561305 DENND2CQ68D51 928 aa4.47□□□□□ -1.69
CASC4-211ENST00000561305 IRF2BP2Q7Z5L9 587 aa4.47□□□□□ -1.69
CASC4-211ENST00000561305 CHPFQ8IZ52 775 aa4.47□□□□□ -1.69
CASC4-211ENST00000561305 NRACQ8N912 160 aa4.47□□□□□ -1.69
CASC4-211ENST00000561305 MAP4K1Q92918 833 aa4.47□□□□□ -1.69
CASC4-211ENST00000561305 NMD3Q96D46 503 aaKnown RBP4.47□□□□□ -1.69
CASC4-211ENST00000561305 STK32BQ9NY57 414 aa4.47□□□□□ -1.69
CASC4-211ENST00000561305 ZIM2Q9NZV7 527 aa4.47□□□□□ -1.69
CASC4-211ENST00000561305 LPAR3Q9UBY5 353 aa4.47□□□□□ -1.69
CASC4-211ENST00000561305 LY6G6EA0A0G2JKS1 128 aa4.46□□□□□ -1.7
CASC4-211ENST00000561305 LOC102723971A0A1B0GUV8 181 aa4.46□□□□□ -1.7
CASC4-211ENST00000561305 ISM1B1AKI9 464 aa4.46□□□□□ -1.7
CASC4-211ENST00000561305 PYCARD-AS1I3L0S3 204 aa4.46□□□□□ -1.7
CASC4-211ENST00000561305 INSIG1O15503 277 aa4.46□□□□□ -1.7
CASC4-211ENST00000561305 MARCH6O60337 910 aa4.46□□□□□ -1.7
CASC4-211ENST00000561305 SRGAP2O75044 1071 aa4.46□□□□□ -1.7
CASC4-211ENST00000561305 HOXB6P17509 224 aaKnown RBP4.46□□□□□ -1.7
CASC4-211ENST00000561305 ATF7P17544 494 aaPredicted RBP4.46□□□□□ -1.7
CASC4-211ENST00000561305 HOXD9P28356 352 aaPredicted RBP4.46□□□□□ -1.7
CASC4-211ENST00000561305 COPB1P53618 953 aaKnown RBP4.46□□□□□ -1.7
CASC4-211ENST00000561305 SUMO3P55854 103 aaPredicted RBP4.46□□□□□ -1.7
CASC4-211ENST00000561305 IGBP1P78318 339 aa4.46□□□□□ -1.7
CASC4-211ENST00000561305 LRRC41Q15345 812 aa4.46□□□□□ -1.7
CASC4-211ENST00000561305 ZNF750Q32MQ0 723 aa4.46□□□□□ -1.7
CASC4-211ENST00000561305 CXorf57Q6NSI4 855 aaKnown RBP4.46□□□□□ -1.7
CASC4-211ENST00000561305 SHC4Q6S5L8 630 aa4.46□□□□□ -1.7
CASC4-211ENST00000561305 DEF8Q6ZN54 512 aa4.46□□□□□ -1.7
CASC4-211ENST00000561305 KCTD20Q7Z5Y7 419 aa4.46□□□□□ -1.7
CASC4-211ENST00000561305 LIX1LQ8IVB5 337 aa4.46□□□□□ -1.7
CASC4-211ENST00000561305 OSR1Q8TAX0 266 aaPredicted RBP4.46□□□□□ -1.7
CASC4-211ENST00000561305 VCPIP1Q96JH7 1222 aa4.46□□□□□ -1.7
CASC4-211ENST00000561305 SIGLEC11Q96RL6 698 aa4.46□□□□□ -1.7
CASC4-211ENST00000561305 DHX36Q9H2U1 1008 aaKnown RBP4.46□□□□□ -1.7
CASC4-211ENST00000561305 SNX15Q9NRS6 342 aa4.46□□□□□ -1.7
CASC4-211ENST00000561305 CPNE7Q9UBL6 633 aa4.46□□□□□ -1.7
CASC4-211ENST00000561305 L1RE1Q9UN81 338 aa4.46□□□□□ -1.7
CASC4-211ENST00000561305 FAM227AF5H4B4 570 aa4.45□□□□□ -1.7
CASC4-211ENST00000561305 ADAM10O14672 748 aa4.45□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms