RNA–Protein interactions for RNA: ENST00000561268.5

SPG11-224, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 4

Gene SPG11, Length 530 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-224ENST00000561268 OTOL1A6NHN0 477 aaPredicted RBP7.32□□□□□ -1.24
SPG11-224ENST00000561268 K7ESF4 209 aa7.32□□□□□ -1.24
SPG11-224ENST00000561268 TRIM66O15016 1216 aa7.32□□□□□ -1.24
SPG11-224ENST00000561268 ARHGAP6O43182 974 aa7.32□□□□□ -1.24
SPG11-224ENST00000561268 LAMTOR5O43504 91 aa7.32□□□□□ -1.24
SPG11-224ENST00000561268 SLU7O95391 586 aaKnown RBP7.32□□□□□ -1.24
SPG11-224ENST00000561268 LMNAP02545 664 aaKnown RBP7.32□□□□□ -1.24
SPG11-224ENST00000561268 NR3C1P04150 777 aa7.32□□□□□ -1.24
SPG11-224ENST00000561268 RPN1P04843 607 aaKnown RBP7.32□□□□□ -1.24
SPG11-224ENST00000561268 TUBBP07437 444 aa7.32□□□□□ -1.24
SPG11-224ENST00000561268 DLATP10515 647 aaKnown RBP7.32□□□□□ -1.24
SPG11-224ENST00000561268 TNNI1P19237 187 aa7.32□□□□□ -1.24
SPG11-224ENST00000561268 ASPAP45381 313 aa7.32□□□□□ -1.24
SPG11-224ENST00000561268 CACNA2D1P54289 1103 aa7.32□□□□□ -1.24
SPG11-224ENST00000561268 MYL6P60660 151 aa7.32□□□□□ -1.24
SPG11-224ENST00000561268 ZXDBP98169 803 aa7.32□□□□□ -1.24
SPG11-224ENST00000561268 MTAPQ13126 283 aa7.32□□□□□ -1.24
SPG11-224ENST00000561268 DSG2Q14126 1118 aa7.32□□□□□ -1.24
SPG11-224ENST00000561268 NCAPHQ15003 741 aa7.32□□□□□ -1.24
SPG11-224ENST00000561268 DDR2Q16832 855 aa7.32□□□□□ -1.24
SPG11-224ENST00000561268 GAB4Q2WGN9 574 aa7.32□□□□□ -1.24
SPG11-224ENST00000561268 EDRF1Q3B7T1 1238 aa7.32□□□□□ -1.24
SPG11-224ENST00000561268 TMEM196Q5HYL7 178 aa7.32□□□□□ -1.24
SPG11-224ENST00000561268 SDHAF4Q5VUM1 108 aa7.32□□□□□ -1.24
SPG11-224ENST00000561268 C11orf57Q6ZUT1 292 aaPredicted RBP7.32□□□□□ -1.24
SPG11-224ENST00000561268 PAQR9Q6ZVX9 377 aa7.32□□□□□ -1.24
SPG11-224ENST00000561268 SPATA2LQ8IUW3 424 aaPredicted RBP7.32□□□□□ -1.24
SPG11-224ENST00000561268 SYNPOQ8N3V7 929 aa7.32□□□□□ -1.24
SPG11-224ENST00000561268 SPEM1Q8N4L4 309 aa7.32□□□□□ -1.24
SPG11-224ENST00000561268 GIPC2Q8TF65 315 aa7.32□□□□□ -1.24
SPG11-224ENST00000561268 OVCA2Q8WZ82 227 aa7.32□□□□□ -1.24
SPG11-224ENST00000561268 FAM3CQ92520 227 aa7.32□□□□□ -1.24
SPG11-224ENST00000561268 MRPS31Q92665 395 aaKnown RBP7.32□□□□□ -1.24
SPG11-224ENST00000561268 FAXDC2Q96IV6 333 aa7.32□□□□□ -1.24
SPG11-224ENST00000561268 SLC22A12Q96S37 553 aa7.32□□□□□ -1.24
SPG11-224ENST00000561268 NAA15Q9BXJ9 866 aaKnown RBP7.32□□□□□ -1.24
SPG11-224ENST00000561268 ZMYND15Q9H091 742 aa7.32□□□□□ -1.24
SPG11-224ENST00000561268 SDCBP2Q9H190 292 aa7.32□□□□□ -1.24
SPG11-224ENST00000561268 SMYD3Q9H7B4 428 aa7.32□□□□□ -1.24
SPG11-224ENST00000561268 TDP1Q9NUW8 608 aa7.32□□□□□ -1.24
SPG11-224ENST00000561268 ZSCAN32Q9NX65 697 aa7.32□□□□□ -1.24
SPG11-224ENST00000561268 GTSE1Q9NYZ3 720 aa7.32□□□□□ -1.24
SPG11-224ENST00000561268 ARHGAP26Q9UNA1 814 aa7.32□□□□□ -1.24
SPG11-224ENST00000561268 R4GN57 208 aa7.32□□□□□ -1.24
SPG11-224ENST00000561268 DOCK4Q8N1I0 1966 aa7.31□□□□□ -1.24
SPG11-224ENST00000561268 DNAH14Q0VDD8 3507 aa7.31□□□□□ -1.24
SPG11-224ENST00000561268 TRDMT1O14717 391 aaKnown RBP7.31□□□□□ -1.24
SPG11-224ENST00000561268 TNFRSF10BO14763 440 aa7.31□□□□□ -1.24
SPG11-224ENST00000561268 STX10O60499 249 aa7.31□□□□□ -1.24
SPG11-224ENST00000561268 EXOC3O60645 756 aa7.31□□□□□ -1.24
SPG11-224ENST00000561268 ZDHHC11BP0C7U3 371 aa7.31□□□□□ -1.24
SPG11-224ENST00000561268 CCNE1P24864 410 aa7.31□□□□□ -1.24
SPG11-224ENST00000561268 AVPR1AP37288 418 aa7.31□□□□□ -1.24
SPG11-224ENST00000561268 SOX9P48436 509 aa7.31□□□□□ -1.24
SPG11-224ENST00000561268 PPP3CCP48454 512 aa7.31□□□□□ -1.24
SPG11-224ENST00000561268 TUBP50607 506 aa7.31□□□□□ -1.24
SPG11-224ENST00000561268 CCR3P51677 355 aa7.31□□□□□ -1.24
SPG11-224ENST00000561268 USP46P62068 366 aa7.31□□□□□ -1.24
SPG11-224ENST00000561268 TNNC1P63316 161 aa7.31□□□□□ -1.24
SPG11-224ENST00000561268 DLG4P78352 724 aa7.31□□□□□ -1.24
SPG11-224ENST00000561268 SLC7A9P82251 487 aa7.31□□□□□ -1.24
SPG11-224ENST00000561268 TNK2Q07912 1038 aa7.31□□□□□ -1.24
SPG11-224ENST00000561268 NCOA4Q13772 614 aa7.31□□□□□ -1.24
SPG11-224ENST00000561268 LRRC32Q14392 662 aa7.31□□□□□ -1.24
SPG11-224ENST00000561268 MTF1Q14872 753 aa7.31□□□□□ -1.24
SPG11-224ENST00000561268 ZNF699Q32M78 642 aa7.31□□□□□ -1.24
SPG11-224ENST00000561268 EML3Q32P44 896 aa7.31□□□□□ -1.24
SPG11-224ENST00000561268 ITPRIPL2Q3MIP1 535 aa7.31□□□□□ -1.24
SPG11-224ENST00000561268 WDR72Q3MJ13 1102 aa7.31□□□□□ -1.24
SPG11-224ENST00000561268 DGKKQ5KSL6 1271 aa7.31□□□□□ -1.24
SPG11-224ENST00000561268 SNX30Q5VWJ9 437 aa7.31□□□□□ -1.24
SPG11-224ENST00000561268 TXNDC8Q6A555 127 aa7.31□□□□□ -1.24
SPG11-224ENST00000561268 FOXR2Q6PJQ5 311 aa7.31□□□□□ -1.24
SPG11-224ENST00000561268 Q6ZNB5 142 aa7.31□□□□□ -1.24
SPG11-224ENST00000561268 Q6ZS52 159 aa7.31□□□□□ -1.24
SPG11-224ENST00000561268 DENND5BQ6ZUT9 1274 aa7.31□□□□□ -1.24
SPG11-224ENST00000561268 SV2AQ7L0J3 742 aa7.31□□□□□ -1.24
SPG11-224ENST00000561268 FAM35AQ86V20 835 aa7.31□□□□□ -1.24
SPG11-224ENST00000561268 FUKQ8N0W3 1084 aa7.31□□□□□ -1.24
SPG11-224ENST00000561268 MAB21L3Q8N8X9 362 aa7.31□□□□□ -1.24
SPG11-224ENST00000561268 RDH13Q8NBN7 331 aa7.31□□□□□ -1.24
SPG11-224ENST00000561268 ZMIZ2Q8NF64 920 aa7.31□□□□□ -1.24
SPG11-224ENST00000561268 ENOX1Q8TC92 643 aaKnown RBP7.31□□□□□ -1.24
SPG11-224ENST00000561268 CSGALNACT1Q8TDX6 532 aa7.31□□□□□ -1.24
SPG11-224ENST00000561268 TAF4BQ92750 862 aa7.31□□□□□ -1.24
SPG11-224ENST00000561268 EZH1Q92800 747 aaPredicted RBP7.31□□□□□ -1.24
SPG11-224ENST00000561268 CCDC127Q96BQ5 260 aa7.31□□□□□ -1.24
SPG11-224ENST00000561268 ZFYVE19Q96K21 471 aa7.31□□□□□ -1.24
SPG11-224ENST00000561268 PKNOX2Q96KN3 472 aa7.31□□□□□ -1.24
SPG11-224ENST00000561268 ZFRQ96KR1 1074 aaKnown RBP7.31□□□□□ -1.24
SPG11-224ENST00000561268 ZNF518BQ9C0D4 1074 aa7.31□□□□□ -1.24
SPG11-224ENST00000561268 SMG9Q9H0W8 520 aaKnown RBP7.31□□□□□ -1.24
SPG11-224ENST00000561268 DPEP3Q9H4B8 488 aa7.31□□□□□ -1.24
SPG11-224ENST00000561268 FAM124BQ9H5Z6 455 aaPredicted RBP7.31□□□□□ -1.24
SPG11-224ENST00000561268 CSNK1G1Q9HCP0 422 aa7.31□□□□□ -1.24
SPG11-224ENST00000561268 SPATA6Q9NWH7 488 aaPredicted RBP7.31□□□□□ -1.24
SPG11-224ENST00000561268 NDRG2Q9UN36 371 aaKnown RBP7.31□□□□□ -1.24
SPG11-224ENST00000561268 CHD5Q8TDI0 1954 aa7.31□□□□□ -1.24
SPG11-224ENST00000561268 SDK1Q7Z5N4 2213 aa7.31□□□□□ -1.24
SPG11-224ENST00000561268 TRAV19A0A0A6YYK7 116 aa7.3□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms