RNA–Protein interactions for RNA: ENST00000561065.1

LMX1B-204, Transcript of LIM homeobox transcription factor 1 beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LMX1B, Length 1,300 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMX1B-204ENST00000561065 CRYBG2Q8N1P7 616 aa16.93■□□□□ 0.3
LMX1B-204ENST00000561065 SYNPOQ8N3V7 929 aa16.93■□□□□ 0.3
LMX1B-204ENST00000561065 SPATA20Q8TB22 786 aa16.93■□□□□ 0.3
LMX1B-204ENST00000561065 WHAMMQ8TF30 809 aa16.93■□□□□ 0.3
LMX1B-204ENST00000561065 SEMA4DQ92854 862 aa16.93■□□□□ 0.3
LMX1B-204ENST00000561065 ATP2A3Q93084 1043 aa16.93■□□□□ 0.3
LMX1B-204ENST00000561065 FBXO32Q969P5 355 aa16.93■□□□□ 0.3
LMX1B-204ENST00000561065 SLITRK1Q96PX8 696 aa16.93■□□□□ 0.3
LMX1B-204ENST00000561065 EHD2Q9NZN4 543 aa16.93■□□□□ 0.3
LMX1B-204ENST00000561065 GMIPQ9P107 970 aa16.93■□□□□ 0.3
LMX1B-204ENST00000561065 FAM92AA1XBS5 289 aa16.92■□□□□ 0.3
LMX1B-204ENST00000561065 ANTXRLA6NF34 631 aa16.92■□□□□ 0.3
LMX1B-204ENST00000561065 RNF40O75150 1001 aa16.92■□□□□ 0.3
LMX1B-204ENST00000561065 ABL1P00519 1130 aa16.92■□□□□ 0.3
LMX1B-204ENST00000561065 YWHAQP27348 245 aa16.92■□□□□ 0.3
LMX1B-204ENST00000561065 GTF2H1P32780 548 aa16.92■□□□□ 0.3
LMX1B-204ENST00000561065 PDE6CP51160 858 aa16.92■□□□□ 0.3
LMX1B-204ENST00000561065 GALK1P51570 392 aa16.92■□□□□ 0.3
LMX1B-204ENST00000561065 LRRC63Q05C16 580 aa16.92■□□□□ 0.3
LMX1B-204ENST00000561065 PPP2R5DQ14738 602 aa16.92■□□□□ 0.3
LMX1B-204ENST00000561065 LPAL2Q16609 132 aa16.92■□□□□ 0.3
LMX1B-204ENST00000561065 HEATR6Q6AI08 1181 aaKnown RBP16.92■□□□□ 0.3
LMX1B-204ENST00000561065 UNC93AQ86WB7 457 aa16.92■□□□□ 0.3
LMX1B-204ENST00000561065 ZC3H3Q8IXZ2 948 aaKnown RBP16.92■□□□□ 0.3
LMX1B-204ENST00000561065 DHTKD1Q96HY7 919 aaPredicted RBP16.92■□□□□ 0.3
LMX1B-204ENST00000561065 P2RY13Q9BPV8 354 aa16.92■□□□□ 0.3
LMX1B-204ENST00000561065 NIF3L1Q9GZT8 377 aa16.92■□□□□ 0.3
LMX1B-204ENST00000561065 TMEM8AQ9HCN3 771 aa16.92■□□□□ 0.3
LMX1B-204ENST00000561065 CSNK1G1Q9HCP0 422 aa16.92■□□□□ 0.3
LMX1B-204ENST00000561065 CACNA1AO00555 2505 aa16.91■□□□□ 0.3
LMX1B-204ENST00000561065 SPAG17Q6Q759 2223 aa16.91■□□□□ 0.3
LMX1B-204ENST00000561065 BICDL2A1A5D9 508 aa16.91■□□□□ 0.3
LMX1B-204ENST00000561065 TRIM49BA6NDI0 452 aa16.91■□□□□ 0.3
LMX1B-204ENST00000561065 COCHO43405 550 aa16.91■□□□□ 0.3
LMX1B-204ENST00000561065 CILPO75339 1184 aa16.91■□□□□ 0.3
LMX1B-204ENST00000561065 RTN3O95197 1032 aaPredicted RBP16.91■□□□□ 0.3
LMX1B-204ENST00000561065 CYP17A1P05093 508 aa16.91■□□□□ 0.3
LMX1B-204ENST00000561065 ZDHHC11BP0C7U3 371 aa16.91■□□□□ 0.3
LMX1B-204ENST00000561065 ADORA2BP29275 332 aa16.91■□□□□ 0.3
LMX1B-204ENST00000561065 OPRD1P41143 372 aa16.91■□□□□ 0.3
LMX1B-204ENST00000561065 PPP3CCP48454 512 aa16.91■□□□□ 0.3
LMX1B-204ENST00000561065 NRLP54845 237 aa16.91■□□□□ 0.3
LMX1B-204ENST00000561065 GRSF1Q12849 480 aaKnown RBP eCLIP16.91■□□□□ 0.3
LMX1B-204ENST00000561065 CLEC20AQ6ZU45 233 aa16.91■□□□□ 0.3
LMX1B-204ENST00000561065 FILIP1Q7Z7B0 1213 aa16.91■□□□□ 0.3
LMX1B-204ENST00000561065 OVCA2Q8WZ82 227 aa16.91■□□□□ 0.3
LMX1B-204ENST00000561065 WBP2Q969T9 261 aa16.91■□□□□ 0.3
LMX1B-204ENST00000561065 CCSER2Q9H7U1 834 aa16.91■□□□□ 0.3
LMX1B-204ENST00000561065 CFAP97Q9P2B7 532 aa16.91■□□□□ 0.3
LMX1B-204ENST00000561065 NCDNQ9UBB6 729 aa16.91■□□□□ 0.3
LMX1B-204ENST00000561065 HHLA1C9JL84 531 aa16.9■□□□□ 0.3
LMX1B-204ENST00000561065 HRO43593 1189 aa16.9■□□□□ 0.3
LMX1B-204ENST00000561065 FGFR1OPO95684 399 aaKnown RBP16.9■□□□□ 0.3
LMX1B-204ENST00000561065 MBL2P11226 248 aaPredicted RBP16.9■□□□□ 0.3
LMX1B-204ENST00000561065 CD58P19256 250 aa16.9■□□□□ 0.3
LMX1B-204ENST00000561065 TGM1P22735 817 aa16.9■□□□□ 0.3
LMX1B-204ENST00000561065 MXI1P50539 228 aa16.9■□□□□ 0.3
LMX1B-204ENST00000561065 MAP3K7CLP57077 242 aa16.9■□□□□ 0.3
LMX1B-204ENST00000561065 MESP2Q0VG99 397 aa16.9■□□□□ 0.3
LMX1B-204ENST00000561065 SNX30Q5VWJ9 437 aa16.9■□□□□ 0.3
LMX1B-204ENST00000561065 TTC39CQ8N584 583 aa16.9■□□□□ 0.3
LMX1B-204ENST00000561065 PDZD8Q8NEN9 1154 aa16.9■□□□□ 0.3
LMX1B-204ENST00000561065 CD101Q93033 1021 aa16.9■□□□□ 0.3
LMX1B-204ENST00000561065 RMDN1Q96DB5 314 aa16.9■□□□□ 0.3
LMX1B-204ENST00000561065 ARID3AQ99856 593 aa16.9■□□□□ 0.3
LMX1B-204ENST00000561065 PARD6AQ9NPB6 346 aa16.9■□□□□ 0.3
LMX1B-204ENST00000561065 CHORDC1Q9UHD1 332 aaPredicted RBP16.9■□□□□ 0.3
LMX1B-204ENST00000561065 GOLGA6L22H0YM25 854 aa16.89■□□□□ 0.29
LMX1B-204ENST00000561065 NFATC1O95644 943 aa16.89■□□□□ 0.29
LMX1B-204ENST00000561065 CHRM1P11229 460 aaPredicted RBP16.89■□□□□ 0.29
LMX1B-204ENST00000561065 DRD1P21728 446 aa16.89■□□□□ 0.29
LMX1B-204ENST00000561065 HOXA6P31267 233 aa16.89■□□□□ 0.29
LMX1B-204ENST00000561065 PXNP49023 591 aaPredicted RBP16.89■□□□□ 0.29
LMX1B-204ENST00000561065 CBWD6Q4V339 395 aa16.89■□□□□ 0.29
LMX1B-204ENST00000561065 CBWD3Q5JTY5 395 aa16.89■□□□□ 0.29
LMX1B-204ENST00000561065 CBWD5Q5RIA9 395 aa16.89■□□□□ 0.29
LMX1B-204ENST00000561065 KRT39Q6A163 491 aa16.89■□□□□ 0.29
LMX1B-204ENST00000561065 LONP2Q86WA8 852 aa16.89■□□□□ 0.29
LMX1B-204ENST00000561065 C12orf40Q86WS4 652 aa16.89■□□□□ 0.29
LMX1B-204ENST00000561065 SFTPA1Q8IWL2 248 aa16.89■□□□□ 0.29
LMX1B-204ENST00000561065 TRIML1Q8N9V2 468 aa16.89■□□□□ 0.29
LMX1B-204ENST00000561065 JAKMIP2Q96AA8 810 aa16.89■□□□□ 0.29
LMX1B-204ENST00000561065 HNRNPABQ99729 332 aaKnown RBP16.89■□□□□ 0.29
LMX1B-204ENST00000561065 CYP3A43Q9HB55 503 aa16.89■□□□□ 0.29
LMX1B-204ENST00000561065 METTL14Q9HCE5 456 aaKnown RBP16.89■□□□□ 0.29
LMX1B-204ENST00000561065 RALGAPA1Q6GYQ0 2036 aa16.88■□□□□ 0.29
LMX1B-204ENST00000561065 SLC16A3O15427 465 aaKnown RBP16.88■□□□□ 0.29
LMX1B-204ENST00000561065 CYP26A1O43174 497 aa16.88■□□□□ 0.29
LMX1B-204ENST00000561065 FAM200BP0CF97 657 aa16.88■□□□□ 0.29
LMX1B-204ENST00000561065 CD44P16070 742 aaKnown RBP16.88■□□□□ 0.29
LMX1B-204ENST00000561065 ID4P47928 161 aa16.88■□□□□ 0.29
LMX1B-204ENST00000561065 TUBP50607 506 aa16.88■□□□□ 0.29
LMX1B-204ENST00000561065 ANKRD40Q6AI12 368 aa16.88■□□□□ 0.29
LMX1B-204ENST00000561065 FOXR2Q6PJQ5 311 aa16.88■□□□□ 0.29
LMX1B-204ENST00000561065 PRR23BQ6ZRT6 265 aa16.88■□□□□ 0.29
LMX1B-204ENST00000561065 WDR5BQ86VZ2 330 aa16.88■□□□□ 0.29
LMX1B-204ENST00000561065 RPLP0P6Q8NHW5 317 aa16.88■□□□□ 0.29
LMX1B-204ENST00000561065 FAXDC2Q96IV6 333 aa16.88■□□□□ 0.29
LMX1B-204ENST00000561065 GBP4Q96PP9 640 aa16.88■□□□□ 0.29
LMX1B-204ENST00000561065 HHIPQ96QV1 700 aa16.88■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms