RNA–Protein interactions for RNA: ENST00000561026.5

SNX1-213, Transcript of sorting nexin 1, humanhuman

TSL 1 (best) BASIC

Gene SNX1, Length 1,374 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-213ENST00000561026 DHCR24Q15392 516 aa17.2■□□□□ 0.34
SNX1-213ENST00000561026 SNX30Q5VWJ9 437 aa17.2■□□□□ 0.34
SNX1-213ENST00000561026 KBTBD6Q86V97 674 aa17.2■□□□□ 0.34
SNX1-213ENST00000561026 DDX42Q86XP3 938 aaKnown RBP eCLIP17.2■□□□□ 0.34
SNX1-213ENST00000561026 NETO1Q8TDF5 533 aa17.2■□□□□ 0.34
SNX1-213ENST00000561026 USP33Q8TEY7 942 aa17.2■□□□□ 0.34
SNX1-213ENST00000561026 CCDC47Q96A33 483 aaKnown RBP17.2■□□□□ 0.34
SNX1-213ENST00000561026 COMMD8Q9NX08 183 aa17.2■□□□□ 0.34
SNX1-213ENST00000561026 EBF1Q9UH73 591 aa17.2■□□□□ 0.34
SNX1-213ENST00000561026 FAM92AA1XBS5 289 aa17.19■□□□□ 0.34
SNX1-213ENST00000561026 DCDC2BA2VCK2 349 aa17.19■□□□□ 0.34
SNX1-213ENST00000561026 SCAMP3O14828 347 aaKnown RBP17.19■□□□□ 0.34
SNX1-213ENST00000561026 MAPK13O15264 365 aa17.19■□□□□ 0.34
SNX1-213ENST00000561026 AP1G2O75843 785 aa17.19■□□□□ 0.34
SNX1-213ENST00000561026 APBB3O95704 486 aa17.19■□□□□ 0.34
SNX1-213ENST00000561026 PRR29P0C7W0 189 aa17.19■□□□□ 0.34
SNX1-213ENST00000561026 ASPAP45381 313 aa17.19■□□□□ 0.34
SNX1-213ENST00000561026 TUBP50607 506 aa17.19■□□□□ 0.34
SNX1-213ENST00000561026 VAMP7P51809 220 aa17.19■□□□□ 0.34
SNX1-213ENST00000561026 NDST1P52848 882 aa17.19■□□□□ 0.34
SNX1-213ENST00000561026 DPYDQ12882 1025 aa17.19■□□□□ 0.34
SNX1-213ENST00000561026 HECTD3Q5T447 861 aa17.19■□□□□ 0.34
SNX1-213ENST00000561026 SPOPLQ6IQ16 392 aa17.19■□□□□ 0.34
SNX1-213ENST00000561026 RHBDF2Q6PJF5 856 aa17.19■□□□□ 0.34
SNX1-213ENST00000561026 UNC93AQ86WB7 457 aa17.19■□□□□ 0.34
SNX1-213ENST00000561026 ZC3H10Q96K80 434 aaKnown RBP17.19■□□□□ 0.34
SNX1-213ENST00000561026 SCAND2PQ9GZW5 306 aaPredicted RBP17.19■□□□□ 0.34
SNX1-213ENST00000561026 ARRDC1-AS1Q9H2J1 176 aa17.19■□□□□ 0.34
SNX1-213ENST00000561026 KRT82Q9NSB4 513 aa17.19■□□□□ 0.34
SNX1-213ENST00000561026 TBC1D14Q9P2M4 693 aa17.19■□□□□ 0.34
SNX1-213ENST00000561026 HMGXB4Q9UGU5 601 aa17.19■□□□□ 0.34
SNX1-213ENST00000561026 HELZP42694 1942 aaKnown RBP17.19■□□□□ 0.34
SNX1-213ENST00000561026 A0A1W2PQ27 194 aa17.18■□□□□ 0.34
SNX1-213ENST00000561026 A0A1W2PQ64 194 aa17.18■□□□□ 0.34
SNX1-213ENST00000561026 A0A1W2PQD8 194 aa17.18■□□□□ 0.34
SNX1-213ENST00000561026 E2F8A0AVK6 867 aa17.18■□□□□ 0.34
SNX1-213ENST00000561026 SLC30A4O14863 429 aa17.18■□□□□ 0.34
SNX1-213ENST00000561026 BEST1O76090 585 aa17.18■□□□□ 0.34
SNX1-213ENST00000561026 HLA-DRAP01903 254 aa17.18■□□□□ 0.34
SNX1-213ENST00000561026 ZDHHC11BP0C7U3 371 aa17.18■□□□□ 0.34
SNX1-213ENST00000561026 CCDC130P13994 396 aa17.18■□□□□ 0.34
SNX1-213ENST00000561026 ORC1Q13415 861 aa17.18■□□□□ 0.34
SNX1-213ENST00000561026 NFIL3Q16649 462 aa17.18■□□□□ 0.34
SNX1-213ENST00000561026 C2orf27AQ580R0 203 aa17.18■□□□□ 0.34
SNX1-213ENST00000561026 KRBA2Q6ZNG9 492 aa17.18■□□□□ 0.34
SNX1-213ENST00000561026 ZMIZ2Q8NF64 920 aa17.18■□□□□ 0.34
SNX1-213ENST00000561026 SLC2A14Q8TDB8 520 aa17.18■□□□□ 0.34
SNX1-213ENST00000561026 ZFRQ96KR1 1074 aaKnown RBP17.18■□□□□ 0.34
SNX1-213ENST00000561026 SMOQ99835 787 aa17.18■□□□□ 0.34
SNX1-213ENST00000561026 CSNK1G1Q9HCP0 422 aa17.18■□□□□ 0.34
SNX1-213ENST00000561026 GMIPQ9P107 970 aa17.18■□□□□ 0.34
SNX1-213ENST00000561026 MAPK8IP1Q9UQF2 711 aa17.18■□□□□ 0.34
SNX1-213ENST00000561026 ATP6V1DQ9Y5K8 247 aa17.18■□□□□ 0.34
SNX1-213ENST00000561026 SPAG17Q6Q759 2223 aa17.17■□□□□ 0.34
SNX1-213ENST00000561026 GDF9O60383 454 aa17.17■□□□□ 0.34
SNX1-213ENST00000561026 EPN2O95208 641 aa17.17■□□□□ 0.34
SNX1-213ENST00000561026 ADH1CP00326 375 aa17.17■□□□□ 0.34
SNX1-213ENST00000561026 NR2F2P24468 414 aa17.17■□□□□ 0.34
SNX1-213ENST00000561026 EIF2DP41214 584 aaKnown RBP17.17■□□□□ 0.34
SNX1-213ENST00000561026 PIK3CAP42336 1068 aa17.17■□□□□ 0.34
SNX1-213ENST00000561026 SLC6A11P48066 632 aa17.17■□□□□ 0.34
SNX1-213ENST00000561026 SEC13P55735 322 aa17.17■□□□□ 0.34
SNX1-213ENST00000561026 PLK5Q496M5 336 aa17.17■□□□□ 0.34
SNX1-213ENST00000561026 INTS8Q75QN2 995 aaKnown RBP17.17■□□□□ 0.34
SNX1-213ENST00000561026 GUF1Q8N442 669 aaKnown RBP17.17■□□□□ 0.34
SNX1-213ENST00000561026 C12orf29Q8N999 325 aa17.17■□□□□ 0.34
SNX1-213ENST00000561026 OTUB2Q96DC9 234 aa17.17■□□□□ 0.34
SNX1-213ENST00000561026 CCSER2Q9H7U1 834 aa17.17■□□□□ 0.34
SNX1-213ENST00000561026 RALGAPA1Q6GYQ0 2036 aa17.16■□□□□ 0.34
SNX1-213ENST00000561026 A0A0A0MRY4 1105 aa17.16■□□□□ 0.34
SNX1-213ENST00000561026 ANTXRLA6NF34 631 aa17.16■□□□□ 0.34
SNX1-213ENST00000561026 ZNF806P0C7X5 589 aa17.16■□□□□ 0.34
SNX1-213ENST00000561026 RPL13P26373 211 aaKnown RBP17.16■□□□□ 0.34
SNX1-213ENST00000561026 GCLMP48507 274 aa17.16■□□□□ 0.34
SNX1-213ENST00000561026 MAP3K7CLP57077 242 aa17.16■□□□□ 0.34
SNX1-213ENST00000561026 ENPEPQ07075 957 aa17.16■□□□□ 0.34
SNX1-213ENST00000561026 PPP3CAQ08209 521 aa17.16■□□□□ 0.34
SNX1-213ENST00000561026 MESP2Q0VG99 397 aa17.16■□□□□ 0.34
SNX1-213ENST00000561026 TSTD1Q8NFU3 115 aa17.16■□□□□ 0.34
SNX1-213ENST00000561026 PNKPQ96T60 521 aa17.16■□□□□ 0.34
SNX1-213ENST00000561026 DUSP9Q99956 384 aaKnown RBP17.16■□□□□ 0.34
SNX1-213ENST00000561026 GOLPH3LQ9H4A5 285 aa17.16■□□□□ 0.34
SNX1-213ENST00000561026 FBXO44Q9H4M3 255 aa17.16■□□□□ 0.34
SNX1-213ENST00000561026 APOBEC3GQ9HC16 384 aaKnown RBP17.16■□□□□ 0.34
SNX1-213ENST00000561026 UTP3Q9NQZ2 479 aaKnown RBP eCLIP17.16■□□□□ 0.343e-11■■■■■ 99.4
SNX1-213ENST00000561026 FAM49BQ9NUQ9 324 aa17.16■□□□□ 0.34
SNX1-213ENST00000561026 PCDHGA5Q9Y5G8 931 aa17.16■□□□□ 0.34
SNX1-213ENST00000561026 DCLK1O15075 740 aa17.15■□□□□ 0.34
SNX1-213ENST00000561026 ZNF202O95125 648 aa17.15■□□□□ 0.34
SNX1-213ENST00000561026 KAT7O95251 611 aa17.15■□□□□ 0.34
SNX1-213ENST00000561026 TRIM49P0CI25 452 aa17.15■□□□□ 0.34
SNX1-213ENST00000561026 TRIM49CP0CI26 452 aa17.15■□□□□ 0.34
SNX1-213ENST00000561026 ADH5P11766 374 aa17.15■□□□□ 0.34
SNX1-213ENST00000561026 KRT13P13646 458 aa17.15■□□□□ 0.34
SNX1-213ENST00000561026 PSMC2P35998 433 aaKnown RBP17.15■□□□□ 0.34
SNX1-213ENST00000561026 PGFP49763 221 aa17.15■□□□□ 0.34
SNX1-213ENST00000561026 DGKEP52429 567 aa17.15■□□□□ 0.34
SNX1-213ENST00000561026 MRPS21P82921 87 aaKnown RBP17.15■□□□□ 0.34
SNX1-213ENST00000561026 INCA1Q0VD86 236 aa17.15■□□□□ 0.34
SNX1-213ENST00000561026 ADAM9Q13443 819 aa17.15■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms