RNA–Protein interactions for RNA: ENST00000560975.5

TPM1-228, Transcript of tropomyosin 1, humanhuman

TSL 5

Gene TPM1, Length 2,855 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-228ENST00000560975 MXRA8Q9BRK3 442 aa17.16■□□□□ 0.34
TPM1-228ENST00000560975 PI4KBQ9UBF8 816 aa17.16■□□□□ 0.34
TPM1-228ENST00000560975 RBBP6Q7Z6E9 1792 aaKnown RBP17.16■□□□□ 0.34
TPM1-228ENST00000560975 GREB1LQ9C091 1923 aaPredicted RBP17.16■□□□□ 0.34
TPM1-228ENST00000560975 ADAMTSL1Q8N6G6 1762 aa17.15■□□□□ 0.34
TPM1-228ENST00000560975 NDC80O14777 642 aa17.15■□□□□ 0.34
TPM1-228ENST00000560975 MAGEB3O15480 346 aa17.15■□□□□ 0.34
TPM1-228ENST00000560975 TFAP2AP05549 437 aa17.15■□□□□ 0.34
TPM1-228ENST00000560975 ACO1P21399 889 aaKnown RBP17.15■□□□□ 0.34
TPM1-228ENST00000560975 PMLP29590 882 aa17.15■□□□□ 0.34
TPM1-228ENST00000560975 C1QBPQ07021 282 aaKnown RBP17.15■□□□□ 0.34
TPM1-228ENST00000560975 TEX44Q53QW1 395 aa17.15■□□□□ 0.34
TPM1-228ENST00000560975 CYP4A22Q5TCH4 519 aa17.15■□□□□ 0.34
TPM1-228ENST00000560975 TTC39BQ5VTQ0 682 aaPredicted RBP17.15■□□□□ 0.34
TPM1-228ENST00000560975 TMC7Q7Z402 723 aa17.15■□□□□ 0.34
TPM1-228ENST00000560975 SEPT12Q8IYM1 358 aa17.15■□□□□ 0.34
TPM1-228ENST00000560975 GPD1LQ8N335 351 aa17.15■□□□□ 0.34
TPM1-228ENST00000560975 METTL25Q8N6Q8 603 aa17.15■□□□□ 0.34
TPM1-228ENST00000560975 MIPOL1Q8TD10 442 aa17.15■□□□□ 0.34
TPM1-228ENST00000560975 APOBEC3GQ9HC16 384 aaKnown RBP17.15■□□□□ 0.34
TPM1-228ENST00000560975 APPL1Q9UKG1 709 aa17.15■□□□□ 0.34
TPM1-228ENST00000560975 PPME1Q9Y570 386 aa17.15■□□□□ 0.34
TPM1-228ENST00000560975 CD48P09326 243 aa17.15■□□□□ 0.34
TPM1-228ENST00000560975 DMP1Q13316 513 aaPredicted RBP17.15■□□□□ 0.34
TPM1-228ENST00000560975 ZNF394Q53GI3 561 aa17.15■□□□□ 0.34
TPM1-228ENST00000560975 TDRD10Q5VZ19 366 aaKnown RBP17.15■□□□□ 0.34
TPM1-228ENST00000560975 C1orf228Q6PIY5 440 aa17.15■□□□□ 0.34
TPM1-228ENST00000560975 IL31RAQ8NI17 732 aa17.15■□□□□ 0.34
TPM1-228ENST00000560975 CLMNQ96JQ2 1002 aa17.15■□□□□ 0.34
TPM1-228ENST00000560975 RIT2Q99578 217 aa17.15■□□□□ 0.34
TPM1-228ENST00000560975 C1orf21Q9H246 121 aa17.15■□□□□ 0.34
TPM1-228ENST00000560975 LZTS1Q9Y250 596 aa17.15■□□□□ 0.34
TPM1-228ENST00000560975 DTNAQ9Y4J8 743 aa17.15■□□□□ 0.34
TPM1-228ENST00000560975 SDR42E2A6NKP2 422 aa17.14■□□□□ 0.34
TPM1-228ENST00000560975 GTF2H1P32780 548 aa17.14■□□□□ 0.34
TPM1-228ENST00000560975 RPL5P46777 297 aaKnown RBP17.14■□□□□ 0.34
TPM1-228ENST00000560975 SNRPFP62306 86 aaKnown RBP17.14■□□□□ 0.34
TPM1-228ENST00000560975 TBL3Q12788 808 aaKnown RBP17.14■□□□□ 0.34
TPM1-228ENST00000560975 CUL2Q13617 745 aa17.14■□□□□ 0.34
TPM1-228ENST00000560975 MAP3K21Q5TCX8 1036 aa17.14■□□□□ 0.34
TPM1-228ENST00000560975 IYDQ6PHW0 289 aa17.14■□□□□ 0.34
TPM1-228ENST00000560975 TRIM72Q6ZMU5 477 aa17.14■□□□□ 0.34
TPM1-228ENST00000560975 SLC26A11Q86WA9 606 aa17.14■□□□□ 0.34
TPM1-228ENST00000560975 TRIM42Q8IWZ5 723 aa17.14■□□□□ 0.34
TPM1-228ENST00000560975 VCPIP1Q96JH7 1222 aa17.14■□□□□ 0.34
TPM1-228ENST00000560975 EHMT1Q9H9B1 1298 aa17.14■□□□□ 0.34
TPM1-228ENST00000560975 NDUFA13Q9P0J0 144 aa17.14■□□□□ 0.34
TPM1-228ENST00000560975 SERPINA10Q9UK55 444 aa17.14■□□□□ 0.34
TPM1-228ENST00000560975 HNRNPCP07910 306 aaKnown RBP eCLIP17.14■□□□□ 0.33
TPM1-228ENST00000560975 SNRPAP09012 282 aaKnown RBP17.14■□□□□ 0.33
TPM1-228ENST00000560975 ACOT2P49753 483 aa17.14■□□□□ 0.33
TPM1-228ENST00000560975 TMEM62Q0P6H9 643 aa17.14■□□□□ 0.33
TPM1-228ENST00000560975 STX3Q13277 289 aa17.14■□□□□ 0.33
TPM1-228ENST00000560975 GK3PQ14409 553 aa17.14■□□□□ 0.33
TPM1-228ENST00000560975 DBN1Q16643 649 aa17.14■□□□□ 0.33
TPM1-228ENST00000560975 TMEM259Q4ZIN3 620 aa17.14■□□□□ 0.33
TPM1-228ENST00000560975 SCARA3Q6AZY7 606 aa17.14■□□□□ 0.33
TPM1-228ENST00000560975 DEFB107AQ8IZN7 70 aa17.14■□□□□ 0.33
TPM1-228ENST00000560975 PIP4K2CQ8TBX8 421 aa17.14■□□□□ 0.33
TPM1-228ENST00000560975 RBM17Q96I25 401 aaKnown RBP17.14■□□□□ 0.33
TPM1-228ENST00000560975 ST6GALNAC4Q9H4F1 302 aa17.14■□□□□ 0.33
TPM1-228ENST00000560975 UBAP1Q9NZ09 502 aa17.14■□□□□ 0.33
TPM1-228ENST00000560975 CDH22Q9UJ99 828 aa17.14■□□□□ 0.33
TPM1-228ENST00000560975 POMPQ9Y244 141 aa17.14■□□□□ 0.33
TPM1-228ENST00000560975 ZNF510Q9Y2H8 683 aa17.14■□□□□ 0.33
TPM1-228ENST00000560975 NRAPQ86VF7 1730 aa17.14■□□□□ 0.33
TPM1-228ENST00000560975 CRKP46108 304 aa17.14■□□□□ 0.33
TPM1-228ENST00000560975 COPAP53621 1224 aa17.14■□□□□ 0.33
TPM1-228ENST00000560975 ADARP55265 1226 aaKnown RBP17.14■□□□□ 0.33
TPM1-228ENST00000560975 ITGA9Q13797 1035 aa17.14■□□□□ 0.33
TPM1-228ENST00000560975 DPYSL3Q14195 570 aa17.14■□□□□ 0.33
TPM1-228ENST00000560975 ZFP28Q8NHY6 868 aa17.14■□□□□ 0.33
TPM1-228ENST00000560975 CNBD2Q96M20 576 aa17.14■□□□□ 0.33
TPM1-228ENST00000560975 SIRPGQ9P1W8 387 aa17.14■□□□□ 0.33
TPM1-228ENST00000560975 MAD1L1Q9Y6D9 718 aa17.14■□□□□ 0.33
TPM1-228ENST00000560975 PTPRJQ12913 1337 aa17.13■□□□□ 0.33
TPM1-228ENST00000560975 COQ9O75208 318 aa17.13■□□□□ 0.33
TPM1-228ENST00000560975 KRT37O76014 449 aa17.13■□□□□ 0.33
TPM1-228ENST00000560975 FAM163BP0C2L3 166 aa17.13■□□□□ 0.33
TPM1-228ENST00000560975 SETSIPP0DME0 302 aa17.13■□□□□ 0.33
TPM1-228ENST00000560975 PIM1P11309 404 aaPredicted RBP17.13■□□□□ 0.33
TPM1-228ENST00000560975 CDK4P11802 303 aa17.13■□□□□ 0.33
TPM1-228ENST00000560975 MMP8P22894 467 aa17.13■□□□□ 0.33
TPM1-228ENST00000560975 PCSK6P29122 969 aa17.13■□□□□ 0.33
TPM1-228ENST00000560975 FDFT1P37268 417 aa17.13■□□□□ 0.33
TPM1-228ENST00000560975 EIF3EP60228 445 aaKnown RBP17.13■□□□□ 0.33
TPM1-228ENST00000560975 TBCCQ15814 346 aa17.13■□□□□ 0.33
TPM1-228ENST00000560975 MROH9Q5TGP6 573 aa17.13■□□□□ 0.33
TPM1-228ENST00000560975 RFX6Q8HWS3 928 aa17.13■□□□□ 0.33
TPM1-228ENST00000560975 NDUFAF2Q8N183 169 aa17.13■□□□□ 0.33
TPM1-228ENST00000560975 TRIM56Q9BRZ2 755 aaKnown RBP17.13■□□□□ 0.33
TPM1-228ENST00000560975 XAB2Q9HCS7 855 aaKnown RBP17.13■□□□□ 0.33
TPM1-228ENST00000560975 FAM198AQ9UFP1 575 aa17.13■□□□□ 0.33
TPM1-228ENST00000560975 DNAJC16Q9Y2G8 782 aa17.13■□□□□ 0.33
TPM1-228ENST00000560975 ITM2AO43736 263 aa17.13■□□□□ 0.33
TPM1-228ENST00000560975 CCNT2O60583 730 aaKnown RBP17.13■□□□□ 0.33
TPM1-228ENST00000560975 ZC3H11AO75152 810 aaKnown RBP eCLIP17.13■□□□□ 0.33
TPM1-228ENST00000560975 AOC1P19801 751 aa17.13■□□□□ 0.33
TPM1-228ENST00000560975 MYLK3Q32MK0 819 aa17.13■□□□□ 0.33
TPM1-228ENST00000560975 FAXCQ5TGI0 409 aa17.13■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms