RNA–Protein interactions for RNA: ENST00000560829.5

SNX1-211, Transcript of sorting nexin 1, humanhuman

TSL 5 BASIC

Gene SNX1, Length 1,869 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-211ENST00000560829 FAM172AQ8WUF8 416 aa13.51□□□□□ -0.25
SNX1-211ENST00000560829 NKD2Q969F2 451 aaPredicted RBP13.51□□□□□ -0.25
SNX1-211ENST00000560829 LRRC45Q96CN5 670 aa13.51□□□□□ -0.25
SNX1-211ENST00000560829 MED10Q9BTT4 135 aa13.51□□□□□ -0.25
SNX1-211ENST00000560829 TRIM31Q9BZY9 425 aa13.51□□□□□ -0.25
SNX1-211ENST00000560829 RNF208Q9H0X6 261 aa13.51□□□□□ -0.25
SNX1-211ENST00000560829 CSNK1G1Q9HCP0 422 aa13.51□□□□□ -0.25
SNX1-211ENST00000560829 KRT82Q9NSB4 513 aa13.51□□□□□ -0.25
SNX1-211ENST00000560829 PCDHB8Q9UN66 801 aa13.51□□□□□ -0.25
SNX1-211ENST00000560829 DRG1Q9Y295 367 aaKnown RBP13.51□□□□□ -0.25
SNX1-211ENST00000560829 GOLGA6BA6NDN3 693 aa13.5□□□□□ -0.25
SNX1-211ENST00000560829 H3BQF6 201 aa13.5□□□□□ -0.25
SNX1-211ENST00000560829 I3L4J1 428 aa13.5□□□□□ -0.25
SNX1-211ENST00000560829 AGPSO00116 658 aa13.5□□□□□ -0.25
SNX1-211ENST00000560829 MDM4O15151 490 aa13.5□□□□□ -0.25
SNX1-211ENST00000560829 B4GALT3O60512 393 aa13.5□□□□□ -0.25
SNX1-211ENST00000560829 HDAC4P56524 1084 aa13.5□□□□□ -0.25
SNX1-211ENST00000560829 MRPS5P82675 430 aaKnown RBP13.5□□□□□ -0.25
SNX1-211ENST00000560829 KRT17Q04695 432 aa13.5□□□□□ -0.25
SNX1-211ENST00000560829 PPP1R7Q15435 360 aa13.5□□□□□ -0.25
SNX1-211ENST00000560829 PAN2Q504Q3 1202 aaKnown RBP13.5□□□□□ -0.25
SNX1-211ENST00000560829 RAB41Q5JT25 222 aa13.5□□□□□ -0.25
SNX1-211ENST00000560829 SPDYCQ5MJ68 293 aa13.5□□□□□ -0.25
SNX1-211ENST00000560829 KAZNQ674X7 775 aa13.5□□□□□ -0.25
SNX1-211ENST00000560829 STRADAQ7RTN6 431 aa13.5□□□□□ -0.25
SNX1-211ENST00000560829 ZNF280BQ86YH2 543 aa13.5□□□□□ -0.25
SNX1-211ENST00000560829 TTC13Q8NBP0 860 aa13.5□□□□□ -0.25
SNX1-211ENST00000560829 KCTD6Q8NC69 237 aa13.5□□□□□ -0.25
SNX1-211ENST00000560829 ZMIZ2Q8NF64 920 aa13.5□□□□□ -0.25
SNX1-211ENST00000560829 FAM71BQ8TC56 605 aa13.5□□□□□ -0.25
SNX1-211ENST00000560829 SEPT8Q92599 483 aa13.5□□□□□ -0.25
SNX1-211ENST00000560829 FMO2Q99518 471 aa13.5□□□□□ -0.25
SNX1-211ENST00000560829 SMOQ99835 787 aa13.5□□□□□ -0.25
SNX1-211ENST00000560829 LRRC4Q9HBW1 653 aa13.5□□□□□ -0.25
SNX1-211ENST00000560829 TBC1D13Q9NVG8 400 aa13.5□□□□□ -0.25
SNX1-211ENST00000560829 ZNF487B1APH4 448 aa13.5□□□□□ -0.25
SNX1-211ENST00000560829 DAB1O75553 588 aa13.5□□□□□ -0.25
SNX1-211ENST00000560829 AP1G2O75843 785 aa13.5□□□□□ -0.25
SNX1-211ENST00000560829 FBXO21O94952 628 aa13.5□□□□□ -0.25
SNX1-211ENST00000560829 PARNO95453 639 aaKnown RBP13.5□□□□□ -0.25
SNX1-211ENST00000560829 ITGB1P05556 798 aa13.5□□□□□ -0.25
SNX1-211ENST00000560829 CD48P09326 243 aa13.5□□□□□ -0.25
SNX1-211ENST00000560829 IVDP26440 423 aa13.5□□□□□ -0.25
SNX1-211ENST00000560829 MATKP42679 507 aa13.5□□□□□ -0.25
SNX1-211ENST00000560829 MAP3K7CLP57077 242 aa13.5□□□□□ -0.25
SNX1-211ENST00000560829 ATP11AP98196 1134 aa13.5□□□□□ -0.25
SNX1-211ENST00000560829 ADIGQ0VDE8 80 aa13.5□□□□□ -0.25
SNX1-211ENST00000560829 PDK2Q15119 407 aa13.5□□□□□ -0.25
SNX1-211ENST00000560829 OASLQ15646 514 aaKnown RBP13.5□□□□□ -0.25
SNX1-211ENST00000560829 CDO1Q16878 200 aa13.5□□□□□ -0.25
SNX1-211ENST00000560829 RAB6CQ53S08 254 aa13.5□□□□□ -0.25
SNX1-211ENST00000560829 OVOS1Q6IE37 1185 aa13.5□□□□□ -0.25
SNX1-211ENST00000560829 BNIPLQ7Z465 357 aa13.5□□□□□ -0.25
SNX1-211ENST00000560829 SLC35B2Q8TB61 432 aa13.5□□□□□ -0.25
SNX1-211ENST00000560829 ART4Q93070 314 aa13.5□□□□□ -0.25
SNX1-211ENST00000560829 NT5C3BQ969T7 300 aa13.5□□□□□ -0.25
SNX1-211ENST00000560829 MYLPFQ96A32 169 aa13.5□□□□□ -0.25
SNX1-211ENST00000560829 SMARCD1Q96GM5 515 aa13.5□□□□□ -0.25
SNX1-211ENST00000560829 TXLNGYQ9BZA5 131 aa13.5□□□□□ -0.25
SNX1-211ENST00000560829 CRISPLD2Q9H0B8 497 aa13.5□□□□□ -0.25
SNX1-211ENST00000560829 RAB6CQ9H0N0 254 aa13.5□□□□□ -0.25
SNX1-211ENST00000560829 NGRNQ9NPE2 291 aaKnown RBP13.5□□□□□ -0.25
SNX1-211ENST00000560829 WBP1LQ9NX94 342 aa13.5□□□□□ -0.25
SNX1-211ENST00000560829 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP13.5□□□□□ -0.25
SNX1-211ENST00000560829 WHRNQ9P202 907 aa13.5□□□□□ -0.25
SNX1-211ENST00000560829 HHLA1C9JL84 531 aa13.49□□□□□ -0.25
SNX1-211ENST00000560829 SYF2O95926 243 aaKnown RBP13.49□□□□□ -0.25
SNX1-211ENST00000560829 CXCL10P02778 98 aa13.49□□□□□ -0.25
SNX1-211ENST00000560829 ITIH2P19823 946 aa13.49□□□□□ -0.25
SNX1-211ENST00000560829 OAS2P29728 719 aaKnown RBP13.49□□□□□ -0.25
SNX1-211ENST00000560829 MNX1P50219 401 aaPredicted RBP13.49□□□□□ -0.25
SNX1-211ENST00000560829 YWHAZP63104 245 aaKnown RBP13.49□□□□□ -0.25
SNX1-211ENST00000560829 BYSLQ13895 437 aaKnown RBP13.49□□□□□ -0.25
SNX1-211ENST00000560829 MAPRE1Q15691 268 aaKnown RBP13.49□□□□□ -0.25
SNX1-211ENST00000560829 KCTD19Q17RG1 926 aaPredicted RBP13.49□□□□□ -0.25
SNX1-211ENST00000560829 C1orf53Q5VUE5 145 aa13.49□□□□□ -0.25
SNX1-211ENST00000560829 TMC3Q7Z5M5 1100 aa13.49□□□□□ -0.25
SNX1-211ENST00000560829 MAP7D3Q8IWC1 876 aa13.49□□□□□ -0.25
SNX1-211ENST00000560829 CRIPAKQ8N1N5 446 aa13.49□□□□□ -0.25
SNX1-211ENST00000560829 THEM5Q8N1Q8 247 aa13.49□□□□□ -0.25
SNX1-211ENST00000560829 FBXO25Q8TCJ0 367 aa13.49□□□□□ -0.25
SNX1-211ENST00000560829 HASPINQ8TF76 798 aa13.49□□□□□ -0.25
SNX1-211ENST00000560829 PIK3R5Q8WYR1 880 aa13.49□□□□□ -0.25
SNX1-211ENST00000560829 HSPH1Q92598 858 aa13.49□□□□□ -0.25
SNX1-211ENST00000560829 TOX2Q96NM4 488 aa13.49□□□□□ -0.25
SNX1-211ENST00000560829 SLC2A13Q96QE2 648 aa13.49□□□□□ -0.25
SNX1-211ENST00000560829 CNGB3Q9NQW8 809 aa13.49□□□□□ -0.25
SNX1-211ENST00000560829 STAU2Q9NUL3 570 aaKnown RBP eCLIP13.49□□□□□ -0.25
SNX1-211ENST00000560829 TMEM30AQ9NV96 361 aa13.49□□□□□ -0.25
SNX1-211ENST00000560829 DNPEPQ9ULA0 475 aa13.49□□□□□ -0.25
SNX1-211ENST00000560829 CEP350Q5VT06 3117 aa13.49□□□□□ -0.25
SNX1-211ENST00000560829 TP73O15350 636 aa13.48□□□□□ -0.25
SNX1-211ENST00000560829 CST8O60676 142 aa13.48□□□□□ -0.25
SNX1-211ENST00000560829 PPFIA2O75334 1257 aa13.48□□□□□ -0.25
SNX1-211ENST00000560829 ITGAVP06756 1048 aa13.48□□□□□ -0.25
SNX1-211ENST00000560829 KLRC2P26717 231 aa13.48□□□□□ -0.25
SNX1-211ENST00000560829 NOS2P35228 1153 aa13.48□□□□□ -0.25
SNX1-211ENST00000560829 TKTL1P51854 596 aa13.48□□□□□ -0.25
SNX1-211ENST00000560829 CACNA2D1P54289 1103 aa13.48□□□□□ -0.25
SNX1-211ENST00000560829 PLTPP55058 493 aa13.48□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms