RNA–Protein interactions for RNA: ENST00000560715.5

TSPAN3-209, Transcript of tetraspanin 3, humanhuman

TSL 2

Gene TSPAN3, Length 2,892 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3-209ENST00000560715 TCP1P17987 556 aaKnown RBP7.07□□□□□ -1.28
TSPAN3-209ENST00000560715 RXRAP19793 462 aa7.07□□□□□ -1.28
TSPAN3-209ENST00000560715 FUT4P22083 530 aa7.07□□□□□ -1.28
TSPAN3-209ENST00000560715 HNF4AP41235 474 aa7.07□□□□□ -1.28
TSPAN3-209ENST00000560715 PTGIRP43119 386 aa7.07□□□□□ -1.28
TSPAN3-209ENST00000560715 ZNF844Q08AG5 666 aa7.07□□□□□ -1.28
TSPAN3-209ENST00000560715 BNIP1Q12981 228 aa7.07□□□□□ -1.28
TSPAN3-209ENST00000560715 PLS1Q14651 629 aa7.07□□□□□ -1.28
TSPAN3-209ENST00000560715 CLPPQ16740 277 aaPredicted RBP7.07□□□□□ -1.28
TSPAN3-209ENST00000560715 SEPT14Q6ZU15 432 aa7.07□□□□□ -1.28
TSPAN3-209ENST00000560715 MAMDC2Q7Z304 686 aaPredicted RBP7.07□□□□□ -1.28
TSPAN3-209ENST00000560715 CCDC103Q8IW40 242 aa7.07□□□□□ -1.28
TSPAN3-209ENST00000560715 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP7.07□□□□□ -1.28
TSPAN3-209ENST00000560715 STKLD1Q8NE28 680 aa7.07□□□□□ -1.28
TSPAN3-209ENST00000560715 OR10H5Q8NGA6 315 aa7.07□□□□□ -1.28
TSPAN3-209ENST00000560715 ATP8B4Q8TF62 1192 aa7.07□□□□□ -1.28
TSPAN3-209ENST00000560715 RSAD2Q8WXG1 361 aa7.07□□□□□ -1.28
TSPAN3-209ENST00000560715 ZNF566Q969W8 418 aa7.07□□□□□ -1.28
TSPAN3-209ENST00000560715 IQCDQ96DY2 449 aa7.07□□□□□ -1.28
TSPAN3-209ENST00000560715 GBP5Q96PP8 586 aa7.07□□□□□ -1.28
TSPAN3-209ENST00000560715 KCNJ15Q99712 375 aa7.07□□□□□ -1.28
TSPAN3-209ENST00000560715 LRRC2Q9BYS8 371 aa7.07□□□□□ -1.28
TSPAN3-209ENST00000560715 KRT23Q9C075 422 aa7.07□□□□□ -1.28
TSPAN3-209ENST00000560715 NKX1-2Q9UD57 310 aaPredicted RBP7.07□□□□□ -1.28
TSPAN3-209ENST00000560715 TFR2Q9UP52 801 aa7.07□□□□□ -1.28
TSPAN3-209ENST00000560715 STK38LQ9Y2H1 464 aa7.07□□□□□ -1.28
TSPAN3-209ENST00000560715 EMC9Q9Y3B6 208 aa7.07□□□□□ -1.28
TSPAN3-209ENST00000560715 COMMD3-BMI1R4GMX3 469 aa7.07□□□□□ -1.28
TSPAN3-209ENST00000560715 TNS2Q63HR2 1409 aa7.07□□□□□ -1.28
TSPAN3-209ENST00000560715 PLCH1Q4KWH8 1693 aa7.07□□□□□ -1.28
TSPAN3-209ENST00000560715 HNRNPRO43390 633 aaKnown RBP7.06□□□□□ -1.28
TSPAN3-209ENST00000560715 EDNRBP24530 442 aa7.06□□□□□ -1.28
TSPAN3-209ENST00000560715 RAD23BP54727 409 aa7.06□□□□□ -1.28
TSPAN3-209ENST00000560715 CNPY1Q3B7I2 92 aa7.06□□□□□ -1.28
TSPAN3-209ENST00000560715 CTXN3Q4LDR2 81 aa7.06□□□□□ -1.28
TSPAN3-209ENST00000560715 OTUD7BQ6GQQ9 843 aa7.06□□□□□ -1.28
TSPAN3-209ENST00000560715 ZNF804AQ7Z570 1209 aa7.06□□□□□ -1.28
TSPAN3-209ENST00000560715 ZNF554Q86TJ5 538 aa7.06□□□□□ -1.28
TSPAN3-209ENST00000560715 ZNF589Q86UQ0 364 aaPredicted RBP7.06□□□□□ -1.28
TSPAN3-209ENST00000560715 RTKN2Q8IZC4 609 aa7.06□□□□□ -1.28
TSPAN3-209ENST00000560715 MYOCDQ8IZQ8 938 aa7.06□□□□□ -1.28
TSPAN3-209ENST00000560715 ZNF619Q8N2I2 560 aa7.06□□□□□ -1.28
TSPAN3-209ENST00000560715 AVL9Q8NBF6 648 aa7.06□□□□□ -1.28
TSPAN3-209ENST00000560715 MOSPD2Q8NHP6 518 aa7.06□□□□□ -1.28
TSPAN3-209ENST00000560715 IFT81Q8WYA0 676 aa7.06□□□□□ -1.28
TSPAN3-209ENST00000560715 ST8SIA4Q92187 359 aa7.06□□□□□ -1.28
TSPAN3-209ENST00000560715 RUNDC3BQ96NL0 473 aa7.06□□□□□ -1.28
TSPAN3-209ENST00000560715 HEPHQ9BQS7 1158 aa7.06□□□□□ -1.28
TSPAN3-209ENST00000560715 ANKRD2Q9GZV1 360 aa7.06□□□□□ -1.28
TSPAN3-209ENST00000560715 EPB41L5Q9HCM4 733 aa7.06□□□□□ -1.28
TSPAN3-209ENST00000560715 SEPT11Q9NVA2 429 aaKnown RBP7.06□□□□□ -1.28
TSPAN3-209ENST00000560715 CPA4Q9UI42 421 aa7.06□□□□□ -1.28
TSPAN3-209ENST00000560715 SLC39A10Q9ULF5 831 aa7.06□□□□□ -1.28
TSPAN3-209ENST00000560715 TMED5Q9Y3A6 229 aa7.06□□□□□ -1.28
TSPAN3-209ENST00000560715 ITGB4P16144 1822 aa7.06□□□□□ -1.28
TSPAN3-209ENST00000560715 AHDC1Q5TGY3 1603 aaPredicted RBP7.06□□□□□ -1.28
TSPAN3-209ENST00000560715 PPM1BO75688 479 aa7.06□□□□□ -1.28
TSPAN3-209ENST00000560715 HEXIM1O94992 359 aaKnown RBP7.06□□□□□ -1.28
TSPAN3-209ENST00000560715 GNA14O95837 355 aa7.06□□□□□ -1.28
TSPAN3-209ENST00000560715 BRAFP15056 766 aa7.06□□□□□ -1.28
TSPAN3-209ENST00000560715 PAFAH1B1P43034 410 aa7.06□□□□□ -1.28
TSPAN3-209ENST00000560715 CACNA2D1P54289 1103 aa7.06□□□□□ -1.28
TSPAN3-209ENST00000560715 HDAC4P56524 1084 aa7.06□□□□□ -1.28
TSPAN3-209ENST00000560715 GUCY2DQ02846 1103 aa7.06□□□□□ -1.28
TSPAN3-209ENST00000560715 MRPL28Q13084 256 aaKnown RBP7.06□□□□□ -1.28
TSPAN3-209ENST00000560715 IL10RAQ13651 578 aa7.06□□□□□ -1.28
TSPAN3-209ENST00000560715 LRRC14Q15048 493 aa7.06□□□□□ -1.28
TSPAN3-209ENST00000560715 ZNF827Q17R98 1081 aa7.06□□□□□ -1.28
TSPAN3-209ENST00000560715 DHX32Q7L7V1 743 aaKnown RBP7.06□□□□□ -1.28
TSPAN3-209ENST00000560715 IQCF2Q8IXL9 164 aa7.06□□□□□ -1.28
TSPAN3-209ENST00000560715 PPIL6Q8IXY8 311 aa7.06□□□□□ -1.28
TSPAN3-209ENST00000560715 ADGRG2Q8IZP9 1017 aa7.06□□□□□ -1.28
TSPAN3-209ENST00000560715 KIF2BQ8N4N8 673 aa7.06□□□□□ -1.28
TSPAN3-209ENST00000560715 RNF10Q8N5U6 811 aaKnown RBP7.06□□□□□ -1.28
TSPAN3-209ENST00000560715 HIC2Q96JB3 615 aa7.06□□□□□ -1.28
TSPAN3-209ENST00000560715 PBKQ96KB5 322 aa7.06□□□□□ -1.28
TSPAN3-209ENST00000560715 TRIM47Q96LD4 638 aa7.06□□□□□ -1.28
TSPAN3-209ENST00000560715 TSGA13Q96PP4 275 aa7.06□□□□□ -1.28
TSPAN3-209ENST00000560715 PIGSQ96S52 555 aa7.06□□□□□ -1.28
TSPAN3-209ENST00000560715 SRP68Q9UHB9 627 aaKnown RBP7.06□□□□□ -1.28
TSPAN3-209ENST00000560715 MKL2Q9ULH7 1088 aa7.06□□□□□ -1.28
TSPAN3-209ENST00000560715 TRIM17Q9Y577 477 aa7.06□□□□□ -1.28
TSPAN3-209ENST00000560715 GPR45Q9Y5Y3 372 aa7.06□□□□□ -1.28
TSPAN3-209ENST00000560715 WNK3Q9BYP7 1800 aa7.06□□□□□ -1.28
TSPAN3-209ENST00000560715 PHLPP1O60346 1717 aa7.06□□□□□ -1.28
TSPAN3-209ENST00000560715 RFX7Q2KHR2 1363 aa7.06□□□□□ -1.28
TSPAN3-209ENST00000560715 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP7.06□□□□□ -1.28
TSPAN3-209ENST00000560715 ARHGAP10A1A4S6 786 aa7.06□□□□□ -1.28
TSPAN3-209ENST00000560715 PIP5K1BO14986 540 aa7.06□□□□□ -1.28
TSPAN3-209ENST00000560715 DAPK3O43293 454 aa7.06□□□□□ -1.28
TSPAN3-209ENST00000560715 MTSS1O43312 755 aa7.06□□□□□ -1.28
TSPAN3-209ENST00000560715 THAP12O43422 761 aa7.06□□□□□ -1.28
TSPAN3-209ENST00000560715 SUPT3HO75486 399 aa7.06□□□□□ -1.28
TSPAN3-209ENST00000560715 CLEC3AO75596 197 aa7.06□□□□□ -1.28
TSPAN3-209ENST00000560715 GSTP1P09211 210 aaKnown RBP7.06□□□□□ -1.28
TSPAN3-209ENST00000560715 TPBGLP0DKB5 382 aa7.06□□□□□ -1.28
TSPAN3-209ENST00000560715 C6P13671 934 aa7.06□□□□□ -1.28
TSPAN3-209ENST00000560715 RPL17P18621 184 aaKnown RBP7.06□□□□□ -1.28
TSPAN3-209ENST00000560715 CDC25AP30304 524 aa7.06□□□□□ -1.28
TSPAN3-209ENST00000560715 HSD17B3P37058 310 aa7.06□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms