RNA–Protein interactions for RNA: ENST00000560679.1

TPM1-225, Transcript of tropomyosin 1, humanhuman

TSL 3

Gene TPM1, Length 292 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-225ENST00000560679 LIMS2Q7Z4I7 341 aa10.59□□□□□ -0.71
TPM1-225ENST00000560679 KCTD17Q8N5Z5 321 aa10.59□□□□□ -0.71
TPM1-225ENST00000560679 LRRC52Q8N7C0 313 aa10.59□□□□□ -0.71
TPM1-225ENST00000560679 KBTBD7Q8WVZ9 684 aa10.59□□□□□ -0.71
TPM1-225ENST00000560679 ERLEC1Q96DZ1 483 aa10.59□□□□□ -0.71
TPM1-225ENST00000560679 ZFRQ96KR1 1074 aaKnown RBP10.59□□□□□ -0.71
TPM1-225ENST00000560679 ACOX2Q99424 681 aa10.59□□□□□ -0.71
TPM1-225ENST00000560679 SYT15Q9BQS2 421 aa10.59□□□□□ -0.71
TPM1-225ENST00000560679 SLC6A17Q9H1V8 727 aa10.59□□□□□ -0.71
TPM1-225ENST00000560679 IL21RQ9HBE5 538 aa10.59□□□□□ -0.71
TPM1-225ENST00000560679 CRTAC1Q9NQ79 661 aa10.59□□□□□ -0.71
TPM1-225ENST00000560679 BLOC1S4Q9NUP1 217 aa10.59□□□□□ -0.71
TPM1-225ENST00000560679 GDAP2Q9NXN4 497 aa10.59□□□□□ -0.71
TPM1-225ENST00000560679 TRPM5Q9NZQ8 1165 aa10.59□□□□□ -0.71
TPM1-225ENST00000560679 SIX4Q9UIU6 781 aa10.59□□□□□ -0.71
TPM1-225ENST00000560679 AGAP1Q9UPQ3 857 aa10.59□□□□□ -0.71
TPM1-225ENST00000560679 APOBEC2Q9Y235 224 aaKnown RBP10.59□□□□□ -0.71
TPM1-225ENST00000560679 MUC22E2RYF6 1773 aaPredicted RBP10.59□□□□□ -0.71
TPM1-225ENST00000560679 EIF4E1BA6NMX2 242 aaKnown RBP10.58□□□□□ -0.72
TPM1-225ENST00000560679 SLC9A3R1O14745 358 aaPredicted RBP10.58□□□□□ -0.72
TPM1-225ENST00000560679 HOXC11O43248 304 aaPredicted RBP10.58□□□□□ -0.72
TPM1-225ENST00000560679 HUS1O60921 280 aa10.58□□□□□ -0.72
TPM1-225ENST00000560679 TULP3O75386 442 aa10.58□□□□□ -0.72
TPM1-225ENST00000560679 PLCG1P19174 1290 aa10.58□□□□□ -0.72
TPM1-225ENST00000560679 BDNFP23560 247 aa10.58□□□□□ -0.72
TPM1-225ENST00000560679 LMO2P25791 158 aa10.58□□□□□ -0.72
TPM1-225ENST00000560679 PCSK1P29120 753 aa10.58□□□□□ -0.72
TPM1-225ENST00000560679 NEK4P51957 841 aa10.58□□□□□ -0.72
TPM1-225ENST00000560679 CACNA2D1P54289 1103 aa10.58□□□□□ -0.72
TPM1-225ENST00000560679 TFAMQ00059 246 aaKnown RBP10.58□□□□□ -0.72
TPM1-225ENST00000560679 C10orf76Q5T2E6 689 aa10.58□□□□□ -0.72
TPM1-225ENST00000560679 VSTM1Q6UX27 236 aa10.58□□□□□ -0.72
TPM1-225ENST00000560679 DENND5BQ6ZUT9 1274 aa10.58□□□□□ -0.72
TPM1-225ENST00000560679 TMPRSS7Q7RTY8 843 aa10.58□□□□□ -0.72
TPM1-225ENST00000560679 TRMT11Q7Z4G4 463 aaKnown RBP10.58□□□□□ -0.72
TPM1-225ENST00000560679 NT5DC4Q86YG4 428 aa10.58□□□□□ -0.72
TPM1-225ENST00000560679 BRSK2Q8IWQ3 736 aa10.58□□□□□ -0.72
TPM1-225ENST00000560679 TOP6BLQ8N6T0 577 aa10.58□□□□□ -0.72
TPM1-225ENST00000560679 NAT16Q8N8M0 369 aa10.58□□□□□ -0.72
TPM1-225ENST00000560679 TERB1Q8NA31 727 aa10.58□□□□□ -0.72
TPM1-225ENST00000560679 WBP2Q969T9 261 aa10.58□□□□□ -0.72
TPM1-225ENST00000560679 ZNF419Q96HQ0 510 aaPredicted RBP10.58□□□□□ -0.72
TPM1-225ENST00000560679 LLPHQ9BRT6 129 aaKnown RBP10.58□□□□□ -0.72
TPM1-225ENST00000560679 CHMP5Q9NZZ3 219 aa10.58□□□□□ -0.72
TPM1-225ENST00000560679 FNDC3AQ9Y2H6 1198 aaKnown RBP10.58□□□□□ -0.72
TPM1-225ENST00000560679 PCDHB9Q9Y5E1 797 aa10.58□□□□□ -0.72
TPM1-225ENST00000560679 SNX9Q9Y5X1 595 aa10.58□□□□□ -0.72
TPM1-225ENST00000560679 ATMQ13315 3056 aa10.57□□□□□ -0.72
TPM1-225ENST00000560679 NAV2Q8IVL1 2488 aa10.57□□□□□ -0.72
TPM1-225ENST00000560679 VWA3AA6NCI4 1184 aa10.57□□□□□ -0.72
TPM1-225ENST00000560679 TBC1D3BA6NDS4 549 aa10.57□□□□□ -0.72
TPM1-225ENST00000560679 K7ELQ4 463 aaPredicted RBP10.57□□□□□ -0.72
TPM1-225ENST00000560679 PPP1R37O75864 691 aa10.57□□□□□ -0.72
TPM1-225ENST00000560679 ATXN1LP0C7T5 689 aaKnown RBP10.57□□□□□ -0.72
TPM1-225ENST00000560679 MAOBP27338 520 aa10.57□□□□□ -0.72
TPM1-225ENST00000560679 NTSR1P30989 418 aa10.57□□□□□ -0.72
TPM1-225ENST00000560679 LHX1P48742 406 aa10.57□□□□□ -0.72
TPM1-225ENST00000560679 NOP14P78316 857 aaKnown RBP10.57□□□□□ -0.72
TPM1-225ENST00000560679 BNC1Q01954 994 aa10.57□□□□□ -0.72
TPM1-225ENST00000560679 CYP4F3Q08477 520 aa10.57□□□□□ -0.72
TPM1-225ENST00000560679 CAMK2BQ13554 666 aa10.57□□□□□ -0.72
TPM1-225ENST00000560679 DHX8Q14562 1220 aaKnown RBP10.57□□□□□ -0.72
TPM1-225ENST00000560679 MCM6Q14566 821 aa10.57□□□□□ -0.72
TPM1-225ENST00000560679 C4orf50Q6ZRC1 276 aa10.57□□□□□ -0.72
TPM1-225ENST00000560679 SCUBE3Q8IX30 993 aa10.57□□□□□ -0.72
TPM1-225ENST00000560679 RGL4Q8IZJ4 473 aa10.57□□□□□ -0.72
TPM1-225ENST00000560679 KCNV2Q8TDN2 545 aa10.57□□□□□ -0.72
TPM1-225ENST00000560679 IPO4Q8TEX9 1081 aaKnown RBP10.57□□□□□ -0.72
TPM1-225ENST00000560679 POMGNT1Q8WZA1 660 aa10.57□□□□□ -0.72
TPM1-225ENST00000560679 SAAL1Q96ER3 474 aa10.57□□□□□ -0.72
TPM1-225ENST00000560679 PCED1BQ96HM7 432 aa10.57□□□□□ -0.72
TPM1-225ENST00000560679 CDK5RAP3Q96JB5 506 aa10.57□□□□□ -0.72
TPM1-225ENST00000560679 CEP295NLQ96MC4 621 aa10.57□□□□□ -0.72
TPM1-225ENST00000560679 GABRG3Q99928 467 aa10.57□□□□□ -0.72
TPM1-225ENST00000560679 TRIM9Q9C026 710 aa10.57□□□□□ -0.72
TPM1-225ENST00000560679 MTMR12Q9C0I1 747 aa10.57□□□□□ -0.72
TPM1-225ENST00000560679 ST6GALNAC4Q9H4F1 302 aa10.57□□□□□ -0.72
TPM1-225ENST00000560679 ZHX3Q9H4I2 956 aa10.57□□□□□ -0.72
TPM1-225ENST00000560679 KIAA1522Q9P206 1035 aaPredicted RBP10.57□□□□□ -0.72
TPM1-225ENST00000560679 ITGA11Q9UKX5 1188 aa10.57□□□□□ -0.72
TPM1-225ENST00000560679 NME7Q9Y5B8 376 aa10.57□□□□□ -0.72
TPM1-225ENST00000560679 PTPRJQ12913 1337 aa10.57□□□□□ -0.72
TPM1-225ENST00000560679 E2F8A0AVK6 867 aa10.56□□□□□ -0.72
TPM1-225ENST00000560679 F8VP50 259 aa10.56□□□□□ -0.72
TPM1-225ENST00000560679 ZNF217O75362 1048 aa10.56□□□□□ -0.72
TPM1-225ENST00000560679 MBL2P11226 248 aaPredicted RBP10.56□□□□□ -0.72
TPM1-225ENST00000560679 GRIK1P39086 918 aa10.56□□□□□ -0.72
TPM1-225ENST00000560679 GAD2Q05329 585 aa10.56□□□□□ -0.72
TPM1-225ENST00000560679 KCNA1Q09470 495 aa10.56□□□□□ -0.72
TPM1-225ENST00000560679 TAF10Q12962 218 aa10.56□□□□□ -0.72
TPM1-225ENST00000560679 SLFN12LQ6IEE8 588 aa10.56□□□□□ -0.72
TPM1-225ENST00000560679 TMEM25Q86YD3 366 aa10.56□□□□□ -0.72
TPM1-225ENST00000560679 BBS7Q8IWZ6 715 aa10.56□□□□□ -0.72
TPM1-225ENST00000560679 ZCCHC9Q8N567 271 aaKnown RBP10.56□□□□□ -0.72
TPM1-225ENST00000560679 DNASE2BQ8WZ79 361 aa10.56□□□□□ -0.72
TPM1-225ENST00000560679 MRGPRX1Q96LB2 322 aa10.56□□□□□ -0.72
TPM1-225ENST00000560679 UBL7Q96S82 380 aaPredicted RBP10.56□□□□□ -0.72
TPM1-225ENST00000560679 FAM213AQ9BRX8 229 aa10.56□□□□□ -0.72
TPM1-225ENST00000560679 STRA6Q9BX79 667 aa10.56□□□□□ -0.72
TPM1-225ENST00000560679 ZDHHC5Q9C0B5 715 aa10.56□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms