RNA–Protein interactions for RNA: ENST00000560620.1

CTDSPL2-209, Transcript of CTD small phosphatase like 2, humanhuman

TSL 3

Gene CTDSPL2, Length 863 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL2-209ENST00000560620 PMM2O15305 246 aa13.69□□□□□ -0.22
CTDSPL2-209ENST00000560620 CYP26A1O43174 497 aa13.69□□□□□ -0.22
CTDSPL2-209ENST00000560620 COCHO43405 550 aa13.69□□□□□ -0.22
CTDSPL2-209ENST00000560620 LAMTOR5O43504 91 aa13.69□□□□□ -0.22
CTDSPL2-209ENST00000560620 OAS1P00973 400 aaKnown RBP13.69□□□□□ -0.22
CTDSPL2-209ENST00000560620 ARSAP15289 507 aa13.69□□□□□ -0.22
CTDSPL2-209ENST00000560620 CTHP32929 405 aa13.69□□□□□ -0.22
CTDSPL2-209ENST00000560620 AMPD2Q01433 879 aa13.69□□□□□ -0.22
CTDSPL2-209ENST00000560620 USP4Q13107 963 aa13.69□□□□□ -0.22
CTDSPL2-209ENST00000560620 PON2Q15165 354 aa13.69□□□□□ -0.22
CTDSPL2-209ENST00000560620 DDX42Q86XP3 938 aaKnown RBP eCLIP13.69□□□□□ -0.22
CTDSPL2-209ENST00000560620 C1orf210Q8IVY1 113 aa13.69□□□□□ -0.22
CTDSPL2-209ENST00000560620 CPA6Q8N4T0 437 aa13.69□□□□□ -0.22
CTDSPL2-209ENST00000560620 RIN3Q8TB24 985 aa13.69□□□□□ -0.22
CTDSPL2-209ENST00000560620 GPT2Q8TD30 523 aa13.69□□□□□ -0.22
CTDSPL2-209ENST00000560620 OSCP1Q8WVF1 389 aa13.69□□□□□ -0.22
CTDSPL2-209ENST00000560620 ATP2A3Q93084 1043 aa13.69□□□□□ -0.22
CTDSPL2-209ENST00000560620 FAM83CQ9BQN1 747 aa13.69□□□□□ -0.22
CTDSPL2-209ENST00000560620 CRACR2AQ9BSW2 395 aa13.69□□□□□ -0.22
CTDSPL2-209ENST00000560620 INTS2Q9H0H0 1204 aaKnown RBP13.69□□□□□ -0.22
CTDSPL2-209ENST00000560620 LMAN1LQ9HAT1 526 aa13.69□□□□□ -0.22
CTDSPL2-209ENST00000560620 PNPLA8Q9NP80 782 aa13.69□□□□□ -0.22
CTDSPL2-209ENST00000560620 DLGAP2Q9P1A6 1054 aa13.69□□□□□ -0.22
CTDSPL2-209ENST00000560620 CFAP97Q9P2B7 532 aa13.69□□□□□ -0.22
CTDSPL2-209ENST00000560620 KIF26AQ9ULI4 1882 aaPredicted RBP13.69□□□□□ -0.22
CTDSPL2-209ENST00000560620 MUC6Q6W4X9 2439 aa13.69□□□□□ -0.22
CTDSPL2-209ENST00000560620 HELZP42694 1942 aaKnown RBP13.68□□□□□ -0.22
CTDSPL2-209ENST00000560620 COL4A2P08572 1712 aa13.68□□□□□ -0.22
CTDSPL2-209ENST00000560620 SCAMP3O14828 347 aaKnown RBP13.68□□□□□ -0.22
CTDSPL2-209ENST00000560620 IRF1P10914 325 aa13.68□□□□□ -0.22
CTDSPL2-209ENST00000560620 VDRP11473 427 aa13.68□□□□□ -0.22
CTDSPL2-209ENST00000560620 KRT5P13647 590 aa13.68□□□□□ -0.22
CTDSPL2-209ENST00000560620 ERCC5P28715 1186 aaPredicted RBP13.68□□□□□ -0.22
CTDSPL2-209ENST00000560620 MAGEA9P43362 315 aa13.68□□□□□ -0.22
CTDSPL2-209ENST00000560620 MLLT6P55198 1093 aaPredicted RBP13.68□□□□□ -0.22
CTDSPL2-209ENST00000560620 SLC7A9P82251 487 aa13.68□□□□□ -0.22
CTDSPL2-209ENST00000560620 NR1H3Q13133 447 aa13.68□□□□□ -0.22
CTDSPL2-209ENST00000560620 LRRC32Q14392 662 aa13.68□□□□□ -0.22
CTDSPL2-209ENST00000560620 ARHGAP17Q68EM7 881 aa13.68□□□□□ -0.22
CTDSPL2-209ENST00000560620 TXNDC11Q6PKC3 985 aa13.68□□□□□ -0.22
CTDSPL2-209ENST00000560620 SASS6Q6UVJ0 657 aa13.68□□□□□ -0.22
CTDSPL2-209ENST00000560620 ARHGEF19Q8IW93 802 aa13.68□□□□□ -0.22
CTDSPL2-209ENST00000560620 ANKRD52Q8NB46 1076 aa13.68□□□□□ -0.22
CTDSPL2-209ENST00000560620 KAT5Q92993 513 aa13.68□□□□□ -0.22
CTDSPL2-209ENST00000560620 THAP9Q9H5L6 903 aa13.68□□□□□ -0.22
CTDSPL2-209ENST00000560620 UBE2TQ9NPD8 197 aaPredicted RBP13.68□□□□□ -0.22
CTDSPL2-209ENST00000560620 HPS4Q9NQG7 708 aa13.68□□□□□ -0.22
CTDSPL2-209ENST00000560620 NAGPAQ9UK23 515 aa13.68□□□□□ -0.22
CTDSPL2-209ENST00000560620 TSPAN16Q9UKR8 245 aa13.68□□□□□ -0.22
CTDSPL2-209ENST00000560620 SH3BP1Q9Y3L3 701 aa13.68□□□□□ -0.22
CTDSPL2-209ENST00000560620 HHLA1C9JL84 531 aa13.67□□□□□ -0.22
CTDSPL2-209ENST00000560620 TLR5O60602 858 aa13.67□□□□□ -0.22
CTDSPL2-209ENST00000560620 NFATC1O95644 943 aa13.67□□□□□ -0.22
CTDSPL2-209ENST00000560620 MBD3O95983 291 aa13.67□□□□□ -0.22
CTDSPL2-209ENST00000560620 PRKCSHP14314 528 aaPredicted RBP13.67□□□□□ -0.22
CTDSPL2-209ENST00000560620 ATP5C1P36542 298 aaKnown RBP13.67□□□□□ -0.22
CTDSPL2-209ENST00000560620 RPS9P46781 194 aaKnown RBP13.67□□□□□ -0.22
CTDSPL2-209ENST00000560620 TUBP50607 506 aa13.67□□□□□ -0.22
CTDSPL2-209ENST00000560620 BCAT1P54687 386 aa13.67□□□□□ -0.22
CTDSPL2-209ENST00000560620 ZXDBP98169 803 aa13.67□□□□□ -0.22
CTDSPL2-209ENST00000560620 GCNT1Q02742 428 aa13.67□□□□□ -0.22
CTDSPL2-209ENST00000560620 GOLGA8FQ08AF8 430 aa13.67□□□□□ -0.22
CTDSPL2-209ENST00000560620 GOLGA8DPQ0D2H9 430 aa13.67□□□□□ -0.22
CTDSPL2-209ENST00000560620 GBP6Q6ZN66 633 aa13.67□□□□□ -0.22
CTDSPL2-209ENST00000560620 RBBP8NLQ8NC74 664 aaPredicted RBP13.67□□□□□ -0.22
CTDSPL2-209ENST00000560620 LMO3Q8TAP4 145 aa13.67□□□□□ -0.22
CTDSPL2-209ENST00000560620 UBA3Q8TBC4 463 aa13.67□□□□□ -0.22
CTDSPL2-209ENST00000560620 EXOC4Q96A65 974 aa13.67□□□□□ -0.22
CTDSPL2-209ENST00000560620 MED15Q96RN5 788 aa13.67□□□□□ -0.22
CTDSPL2-209ENST00000560620 PHOX2BQ99453 314 aa13.67□□□□□ -0.22
CTDSPL2-209ENST00000560620 LINC00597Q9H2U6 94 aa13.67□□□□□ -0.22
CTDSPL2-209ENST00000560620 ECT2Q9H8V3 914 aa13.67□□□□□ -0.22
CTDSPL2-209ENST00000560620 LRRC4Q9HBW1 653 aa13.67□□□□□ -0.22
CTDSPL2-209ENST00000560620 RBM12Q9NTZ6 932 aaKnown RBP13.67□□□□□ -0.22
CTDSPL2-209ENST00000560620 IL37Q9NZH6 218 aa13.67□□□□□ -0.22
CTDSPL2-209ENST00000560620 KIAA1257Q9ULG3 409 aa13.67□□□□□ -0.22
CTDSPL2-209ENST00000560620 SCML2Q9UQR0 700 aa13.67□□□□□ -0.22
CTDSPL2-209ENST00000560620 PATJQ8NI35 1801 aa13.67□□□□□ -0.22
CTDSPL2-209ENST00000560620 A0A1W2PQH9 124 aa13.66□□□□□ -0.22
CTDSPL2-209ENST00000560620 FAM92AA1XBS5 289 aa13.66□□□□□ -0.22
CTDSPL2-209ENST00000560620 OTOL1A6NHN0 477 aaPredicted RBP13.66□□□□□ -0.22
CTDSPL2-209ENST00000560620 SHISA7A6NL88 538 aa13.66□□□□□ -0.22
CTDSPL2-209ENST00000560620 SLC9A3R1O14745 358 aaPredicted RBP13.66□□□□□ -0.22
CTDSPL2-209ENST00000560620 OLFM2O95897 454 aa13.66□□□□□ -0.22
CTDSPL2-209ENST00000560620 PAEPP09466 180 aa13.66□□□□□ -0.22
CTDSPL2-209ENST00000560620 RALAP11233 206 aa13.66□□□□□ -0.22
CTDSPL2-209ENST00000560620 TCF3P15923 654 aa13.66□□□□□ -0.22
CTDSPL2-209ENST00000560620 USP8P40818 1118 aa13.66□□□□□ -0.22
CTDSPL2-209ENST00000560620 TKTL1P51854 596 aa13.66□□□□□ -0.22
CTDSPL2-209ENST00000560620 KIF11P52732 1056 aa13.66□□□□□ -0.22
CTDSPL2-209ENST00000560620 MFAP3P55082 362 aa13.66□□□□□ -0.22
CTDSPL2-209ENST00000560620 CSTF1Q05048 431 aaKnown RBP13.66□□□□□ -0.22
CTDSPL2-209ENST00000560620 PDE4CQ08493 712 aa13.66□□□□□ -0.22
CTDSPL2-209ENST00000560620 BST2Q10589 180 aaKnown RBP13.66□□□□□ -0.22
CTDSPL2-209ENST00000560620 GRSF1Q12849 480 aaKnown RBP eCLIP13.66□□□□□ -0.22
CTDSPL2-209ENST00000560620 MTAPQ13126 283 aa13.66□□□□□ -0.22
CTDSPL2-209ENST00000560620 MAN2A1Q16706 1144 aa13.66□□□□□ -0.22
CTDSPL2-209ENST00000560620 EXOC3L4Q17RC7 722 aa13.66□□□□□ -0.22
CTDSPL2-209ENST00000560620 EML3Q32P44 896 aa13.66□□□□□ -0.22
CTDSPL2-209ENST00000560620 C10orf120Q5SQS8 335 aa13.66□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms