RNA–Protein interactions for RNA: ENST00000560564.1

SPG21-211, Transcript of SPG21, maspardin, humanhuman

TSL 4

Gene SPG21, Length 607 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG21-211ENST00000560564 NRLP54845 237 aa17.16■□□□□ 0.34
SPG21-211ENST00000560564 IFRD2Q12894 506 aaPredicted RBP17.16■□□□□ 0.34
SPG21-211ENST00000560564 PPP2R5DQ14738 602 aa17.16■□□□□ 0.34
SPG21-211ENST00000560564 ELOA2Q8IYF1 753 aaPredicted RBP17.16■□□□□ 0.34
SPG21-211ENST00000560564 DCLK2Q8N568 766 aa17.16■□□□□ 0.34
SPG21-211ENST00000560564 PDZD8Q8NEN9 1154 aa17.16■□□□□ 0.34
SPG21-211ENST00000560564 FBXO32Q969P5 355 aa17.16■□□□□ 0.34
SPG21-211ENST00000560564 HNRNPABQ99729 332 aaKnown RBP17.16■□□□□ 0.34
SPG21-211ENST00000560564 P2RY13Q9BPV8 354 aa17.16■□□□□ 0.34
SPG21-211ENST00000560564 IMPG2Q9BZV3 1241 aa17.16■□□□□ 0.34
SPG21-211ENST00000560564 MMRN2Q9H8L6 949 aa17.16■□□□□ 0.34
SPG21-211ENST00000560564 COMMD8Q9NX08 183 aa17.16■□□□□ 0.34
SPG21-211ENST00000560564 SMG5Q9UPR3 1016 aaKnown RBP17.16■□□□□ 0.34
SPG21-211ENST00000560564 RALGAPA1Q6GYQ0 2036 aa17.16■□□□□ 0.34
SPG21-211ENST00000560564 HHLA1C9JL84 531 aa17.15■□□□□ 0.34
SPG21-211ENST00000560564 COCHO43405 550 aa17.15■□□□□ 0.34
SPG21-211ENST00000560564 DRD1P21728 446 aa17.15■□□□□ 0.34
SPG21-211ENST00000560564 TUBP50607 506 aa17.15■□□□□ 0.34
SPG21-211ENST00000560564 AMPD2Q01433 879 aa17.15■□□□□ 0.34
SPG21-211ENST00000560564 GRSF1Q12849 480 aaKnown RBP eCLIP17.15■□□□□ 0.34
SPG21-211ENST00000560564 ANKRD40Q6AI12 368 aa17.15■□□□□ 0.34
SPG21-211ENST00000560564 CLEC20AQ6ZU45 233 aa17.15■□□□□ 0.34
SPG21-211ENST00000560564 GPRIN1Q7Z2K8 1008 aa17.15■□□□□ 0.34
SPG21-211ENST00000560564 TTC16Q8NEE8 873 aa17.15■□□□□ 0.34
SPG21-211ENST00000560564 SMARCE1Q969G3 411 aa17.15■□□□□ 0.34
SPG21-211ENST00000560564 FAXDC2Q96IV6 333 aa17.15■□□□□ 0.34
SPG21-211ENST00000560564 NT5C1AQ9BXI3 368 aa17.15■□□□□ 0.34
SPG21-211ENST00000560564 SMPD4Q9NXE4 827 aa17.15■□□□□ 0.34
SPG21-211ENST00000560564 GMIPQ9P107 970 aa17.15■□□□□ 0.34
SPG21-211ENST00000560564 CHORDC1Q9UHD1 332 aaPredicted RBP17.15■□□□□ 0.34
SPG21-211ENST00000560564 COQ4Q9Y3A0 265 aa17.15■□□□□ 0.34
SPG21-211ENST00000560564 NCOR2Q9Y618 2525 aa17.14■□□□□ 0.33
SPG21-211ENST00000560564 TRIM49BA6NDI0 452 aa17.14■□□□□ 0.33
SPG21-211ENST00000560564 CHURC1-FNTBB4DL54 471 aa17.14■□□□□ 0.33
SPG21-211ENST00000560564 SLC16A3O15427 465 aaKnown RBP17.14■□□□□ 0.33
SPG21-211ENST00000560564 RNF40O75150 1001 aa17.14■□□□□ 0.33
SPG21-211ENST00000560564 SMC2O95347 1197 aa17.14■□□□□ 0.33
SPG21-211ENST00000560564 NFATC1O95644 943 aa17.14■□□□□ 0.33
SPG21-211ENST00000560564 ABL1P00519 1130 aa17.14■□□□□ 0.33
SPG21-211ENST00000560564 CYP17A1P05093 508 aa17.14■□□□□ 0.33
SPG21-211ENST00000560564 FAM200BP0CF97 657 aa17.14■□□□□ 0.33
SPG21-211ENST00000560564 EPB41P11171 864 aaKnown RBP17.14■□□□□ 0.33
SPG21-211ENST00000560564 CD44P16070 742 aaKnown RBP17.14■□□□□ 0.33
SPG21-211ENST00000560564 OPRD1P41143 372 aa17.14■□□□□ 0.33
SPG21-211ENST00000560564 FNTBP49356 437 aa17.14■□□□□ 0.33
SPG21-211ENST00000560564 MAP3K7CLP57077 242 aa17.14■□□□□ 0.33
SPG21-211ENST00000560564 CBWD6Q4V339 395 aa17.14■□□□□ 0.33
SPG21-211ENST00000560564 CBWD3Q5JTY5 395 aa17.14■□□□□ 0.33
SPG21-211ENST00000560564 CBWD5Q5RIA9 395 aa17.14■□□□□ 0.33
SPG21-211ENST00000560564 FILIP1Q7Z7B0 1213 aa17.14■□□□□ 0.33
SPG21-211ENST00000560564 FBXL13Q8NEE6 735 aa17.14■□□□□ 0.33
SPG21-211ENST00000560564 CYFIP2Q96F07 1278 aa17.14■□□□□ 0.33
SPG21-211ENST00000560564 CCSER2Q9H7U1 834 aa17.14■□□□□ 0.33
SPG21-211ENST00000560564 RAB20Q9NX57 234 aa17.14■□□□□ 0.33
SPG21-211ENST00000560564 CNOT1A5YKK6 2376 aaKnown RBP17.13■□□□□ 0.33
SPG21-211ENST00000560564 MBL2P11226 248 aaPredicted RBP17.13■□□□□ 0.33
SPG21-211ENST00000560564 CD58P19256 250 aa17.13■□□□□ 0.33
SPG21-211ENST00000560564 BMP6P22004 513 aa17.13■□□□□ 0.33
SPG21-211ENST00000560564 ADORA2BP29275 332 aa17.13■□□□□ 0.33
SPG21-211ENST00000560564 FKBP3Q00688 224 aaKnown RBP17.13■□□□□ 0.33
SPG21-211ENST00000560564 LRRC63Q05C16 580 aa17.13■□□□□ 0.33
SPG21-211ENST00000560564 HECTD3Q5T447 861 aa17.13■□□□□ 0.33
SPG21-211ENST00000560564 LONP2Q86WA8 852 aa17.13■□□□□ 0.33
SPG21-211ENST00000560564 ADGRG2Q8IZP9 1017 aa17.13■□□□□ 0.33
SPG21-211ENST00000560564 CD101Q93033 1021 aa17.13■□□□□ 0.33
SPG21-211ENST00000560564 ARID3AQ99856 593 aa17.13■□□□□ 0.33
SPG21-211ENST00000560564 DUSP9Q99956 384 aaKnown RBP17.13■□□□□ 0.33
SPG21-211ENST00000560564 PNPLA8Q9NP80 782 aa17.13■□□□□ 0.33
SPG21-211ENST00000560564 CFAP97Q9P2B7 532 aa17.13■□□□□ 0.33
SPG21-211ENST00000560564 MAN1B1Q9UKM7 699 aa17.13■□□□□ 0.33
SPG21-211ENST00000560564 SCAMP3O14828 347 aaKnown RBP17.12■□□□□ 0.33
SPG21-211ENST00000560564 HRO43593 1189 aa17.12■□□□□ 0.33
SPG21-211ENST00000560564 GADD45BO75293 160 aaPredicted RBP17.12■□□□□ 0.33
SPG21-211ENST00000560564 CHRM1P11229 460 aaPredicted RBP17.12■□□□□ 0.33
SPG21-211ENST00000560564 TGM1P22735 817 aa17.12■□□□□ 0.33
SPG21-211ENST00000560564 FBXO43Q4G163 708 aa17.12■□□□□ 0.33
SPG21-211ENST00000560564 TATDN2Q93075 761 aa17.12■□□□□ 0.33
SPG21-211ENST00000560564 WBP2Q969T9 261 aa17.12■□□□□ 0.33
SPG21-211ENST00000560564 SLC35C1Q96A29 364 aa17.12■□□□□ 0.33
SPG21-211ENST00000560564 TSG101Q99816 390 aa17.12■□□□□ 0.33
SPG21-211ENST00000560564 GTPBP4Q9BZE4 634 aaKnown RBP17.12■□□□□ 0.33
SPG21-211ENST00000560564 FBXO44Q9H4M3 255 aa17.12■□□□□ 0.33
SPG21-211ENST00000560564 POLR3BQ9NW08 1133 aaPredicted RBP17.12■□□□□ 0.33
SPG21-211ENST00000560564 SLC9A3R1O14745 358 aaPredicted RBP17.11■□□□□ 0.33
SPG21-211ENST00000560564 STX10O60499 249 aa17.11■□□□□ 0.33
SPG21-211ENST00000560564 GREM1O60565 184 aa17.11■□□□□ 0.33
SPG21-211ENST00000560564 RAD23BP54727 409 aa17.11■□□□□ 0.33
SPG21-211ENST00000560564 MESP2Q0VG99 397 aa17.11■□□□□ 0.33
SPG21-211ENST00000560564 NR1H3Q13133 447 aa17.11■□□□□ 0.33
SPG21-211ENST00000560564 SRSF5Q13243 272 aaKnown RBP17.11■□□□□ 0.33
SPG21-211ENST00000560564 DHCR24Q15392 516 aa17.11■□□□□ 0.33
SPG21-211ENST00000560564 PPP1R26Q5T8A7 1209 aaPredicted RBP17.11■□□□□ 0.33
SPG21-211ENST00000560564 RHBDF2Q6PJF5 856 aa17.11■□□□□ 0.33
SPG21-211ENST00000560564 DDX42Q86XP3 938 aaKnown RBP eCLIP17.11■□□□□ 0.33
SPG21-211ENST00000560564 KIAA2013Q8IYS2 634 aa17.11■□□□□ 0.33
SPG21-211ENST00000560564 SLC4A11Q8NBS3 891 aa17.11■□□□□ 0.33
SPG21-211ENST00000560564 CCDC150Q8NCX0 1101 aa17.11■□□□□ 0.33
SPG21-211ENST00000560564 FAM124BQ9H5Z6 455 aaPredicted RBP17.11■□□□□ 0.33
SPG21-211ENST00000560564 CYLDQ9NQC7 956 aa17.11■□□□□ 0.33
SPG21-211ENST00000560564 CISHQ9NSE2 258 aa17.11■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms