RNA–Protein interactions for RNA: ENST00000560445.1

TPM1-223, Transcript of tropomyosin 1, humanhuman

TSL 3 BASIC

Gene TPM1, Length 485 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-223ENST00000560445 KCNA4P22459 653 aa14.91□□□□□ -0.02
TPM1-223ENST00000560445 ASPAP45381 313 aa14.91□□□□□ -0.02
TPM1-223ENST00000560445 RAP1GAPP47736 663 aa14.91□□□□□ -0.02
TPM1-223ENST00000560445 FNTBP49356 437 aa14.91□□□□□ -0.02
TPM1-223ENST00000560445 PSEN1P49768 467 aa14.91□□□□□ -0.02
TPM1-223ENST00000560445 MXI1P50539 228 aa14.91□□□□□ -0.02
TPM1-223ENST00000560445 CDH8P55286 799 aa14.91□□□□□ -0.02
TPM1-223ENST00000560445 YWHAEP62258 255 aaKnown RBP14.91□□□□□ -0.02
TPM1-223ENST00000560445 DLG4P78352 724 aa14.91□□□□□ -0.02
TPM1-223ENST00000560445 GAS6Q14393 721 aa14.91□□□□□ -0.02
TPM1-223ENST00000560445 HSF5Q4G112 596 aaPredicted RBP14.91□□□□□ -0.02
TPM1-223ENST00000560445 COBLL1Q53SF7 1204 aa14.91□□□□□ -0.02
TPM1-223ENST00000560445 BTBD8Q5XKL5 378 aa14.91□□□□□ -0.02
TPM1-223ENST00000560445 SYT13Q7L8C5 426 aa14.91□□□□□ -0.02
TPM1-223ENST00000560445 FUKQ8N0W3 1084 aa14.91□□□□□ -0.02
TPM1-223ENST00000560445 SLC2A14Q8TDB8 520 aa14.91□□□□□ -0.02
TPM1-223ENST00000560445 SMARCE1Q969G3 411 aa14.91□□□□□ -0.02
TPM1-223ENST00000560445 LOXL4Q96JB6 756 aa14.91□□□□□ -0.02
TPM1-223ENST00000560445 TIGD1Q96MW7 591 aa14.91□□□□□ -0.02
TPM1-223ENST00000560445 CDK5RAP1Q96SZ6 601 aaKnown RBP14.91□□□□□ -0.02
TPM1-223ENST00000560445 CSNK1G1Q9HCP0 422 aa14.91□□□□□ -0.02
TPM1-223ENST00000560445 CDV3Q9UKY7 258 aaKnown RBP14.91□□□□□ -0.02
TPM1-223ENST00000560445 GPR179Q6PRD1 2367 aa14.91□□□□□ -0.02
TPM1-223ENST00000560445 WDR87Q6ZQQ6 2873 aa14.9□□□□□ -0.02
TPM1-223ENST00000560445 FAM92AA1XBS5 289 aa14.9□□□□□ -0.02
TPM1-223ENST00000560445 PSMA7O14818 248 aa14.9□□□□□ -0.02
TPM1-223ENST00000560445 APBB3O95704 486 aa14.9□□□□□ -0.02
TPM1-223ENST00000560445 CCDC192P0DO97 292 aa14.9□□□□□ -0.02
TPM1-223ENST00000560445 GCLMP48507 274 aa14.9□□□□□ -0.02
TPM1-223ENST00000560445 GALK1P51570 392 aa14.9□□□□□ -0.02
TPM1-223ENST00000560445 FKBP3Q00688 224 aaKnown RBP14.9□□□□□ -0.02
TPM1-223ENST00000560445 LRRC63Q05C16 580 aa14.9□□□□□ -0.02
TPM1-223ENST00000560445 ZCWPW2Q504Y3 356 aa14.9□□□□□ -0.02
TPM1-223ENST00000560445 ZNF658Q5TYW1 1059 aaPredicted RBP14.9□□□□□ -0.02
TPM1-223ENST00000560445 HEATR6Q6AI08 1181 aaKnown RBP14.9□□□□□ -0.02
TPM1-223ENST00000560445 CACNA2D4Q7Z3S7 1137 aa14.9□□□□□ -0.02
TPM1-223ENST00000560445 FILIP1Q7Z7B0 1213 aa14.9□□□□□ -0.02
TPM1-223ENST00000560445 FBXL13Q8NEE6 735 aa14.9□□□□□ -0.02
TPM1-223ENST00000560445 GAB3Q8WWW8 586 aa14.9□□□□□ -0.02
TPM1-223ENST00000560445 HNRNPABQ99729 332 aaKnown RBP14.9□□□□□ -0.02
TPM1-223ENST00000560445 GOLPH3LQ9H4A5 285 aa14.9□□□□□ -0.02
TPM1-223ENST00000560445 IL37Q9NZH6 218 aa14.9□□□□□ -0.02
TPM1-223ENST00000560445 CFAP97Q9P2B7 532 aa14.9□□□□□ -0.02
TPM1-223ENST00000560445 LSM7Q9UK45 103 aaKnown RBP14.9□□□□□ -0.02
TPM1-223ENST00000560445 MAPK8IP1Q9UQF2 711 aa14.9□□□□□ -0.02
TPM1-223ENST00000560445 MYH10P35580 1976 aa14.9□□□□□ -0.02
TPM1-223ENST00000560445 OTOL1A6NHN0 477 aaPredicted RBP14.89□□□□□ -0.03
TPM1-223ENST00000560445 RPP40O75818 363 aaKnown RBP14.89□□□□□ -0.03
TPM1-223ENST00000560445 ALDH1A2O94788 518 aa14.89□□□□□ -0.03
TPM1-223ENST00000560445 EGFP01133 1207 aa14.89□□□□□ -0.03
TPM1-223ENST00000560445 DGLUCYQ7Z3D6 616 aa14.89□□□□□ -0.03
TPM1-223ENST00000560445 FMR1NBQ8N0W7 255 aaPredicted RBP14.89□□□□□ -0.03
TPM1-223ENST00000560445 ARHGAP18Q8N392 663 aa14.89□□□□□ -0.03
TPM1-223ENST00000560445 KCNK16Q96T55 309 aa14.89□□□□□ -0.03
TPM1-223ENST00000560445 SMPD4Q9NXE4 827 aa14.89□□□□□ -0.03
TPM1-223ENST00000560445 NME7Q9Y5B8 376 aa14.89□□□□□ -0.03
TPM1-223ENST00000560445 CEP250Q9BV73 2442 aa14.88□□□□□ -0.03
TPM1-223ENST00000560445 TNFRSF10BO14763 440 aa14.88□□□□□ -0.03
TPM1-223ENST00000560445 COCHO43405 550 aa14.88□□□□□ -0.03
TPM1-223ENST00000560445 TLR5O60602 858 aa14.88□□□□□ -0.03
TPM1-223ENST00000560445 CILPO75339 1184 aa14.88□□□□□ -0.03
TPM1-223ENST00000560445 APODP05090 189 aa14.88□□□□□ -0.03
TPM1-223ENST00000560445 ZDHHC11BP0C7U3 371 aa14.88□□□□□ -0.03
TPM1-223ENST00000560445 TRIM49P0CI25 452 aa14.88□□□□□ -0.03
TPM1-223ENST00000560445 TRIM49CP0CI26 452 aa14.88□□□□□ -0.03
TPM1-223ENST00000560445 ADH5P11766 374 aa14.88□□□□□ -0.03
TPM1-223ENST00000560445 CCDC130P13994 396 aa14.88□□□□□ -0.03
TPM1-223ENST00000560445 CACNA2D1P54289 1103 aa14.88□□□□□ -0.03
TPM1-223ENST00000560445 MAP3K7CLP57077 242 aa14.88□□□□□ -0.03
TPM1-223ENST00000560445 MCCD1P59942 119 aaPredicted RBP14.88□□□□□ -0.03
TPM1-223ENST00000560445 MRPS21P82921 87 aaKnown RBP14.88□□□□□ -0.03
TPM1-223ENST00000560445 GAD2Q05329 585 aa14.88□□□□□ -0.03
TPM1-223ENST00000560445 CETN1Q12798 172 aa14.88□□□□□ -0.03
TPM1-223ENST00000560445 E2F5Q15329 346 aa14.88□□□□□ -0.03
TPM1-223ENST00000560445 ELF2Q15723 593 aa14.88□□□□□ -0.03
TPM1-223ENST00000560445 KLHDC10Q6PID8 442 aa14.88□□□□□ -0.03
TPM1-223ENST00000560445 TRMT11Q7Z4G4 463 aaKnown RBP14.88□□□□□ -0.03
TPM1-223ENST00000560445 ELOA2Q8IYF1 753 aaPredicted RBP14.88□□□□□ -0.03
TPM1-223ENST00000560445 DCLK2Q8N568 766 aa14.88□□□□□ -0.03
TPM1-223ENST00000560445 RPLP0P6Q8NHW5 317 aa14.88□□□□□ -0.03
TPM1-223ENST00000560445 RIN3Q8TB24 985 aa14.88□□□□□ -0.03
TPM1-223ENST00000560445 KCNV2Q8TDN2 545 aa14.88□□□□□ -0.03
TPM1-223ENST00000560445 TAS1R2Q8TE23 839 aa14.88□□□□□ -0.03
TPM1-223ENST00000560445 CHFRQ96EP1 664 aa14.88□□□□□ -0.03
TPM1-223ENST00000560445 CYFIP2Q96F07 1278 aa14.88□□□□□ -0.03
TPM1-223ENST00000560445 CHAMP1Q96JM3 812 aa14.88□□□□□ -0.03
TPM1-223ENST00000560445 PNKPQ96T60 521 aa14.88□□□□□ -0.03
TPM1-223ENST00000560445 SDCBP2Q9H190 292 aa14.88□□□□□ -0.03
TPM1-223ENST00000560445 MMRN2Q9H8L6 949 aa14.88□□□□□ -0.03
TPM1-223ENST00000560445 GDPD2Q9HCC8 539 aa14.88□□□□□ -0.03
TPM1-223ENST00000560445 METTL14Q9HCE5 456 aaKnown RBP14.88□□□□□ -0.03
TPM1-223ENST00000560445 UTP3Q9NQZ2 479 aaKnown RBP eCLIP14.88□□□□□ -0.03
TPM1-223ENST00000560445 FAM49BQ9NUQ9 324 aa14.88□□□□□ -0.03
TPM1-223ENST00000560445 GMIPQ9P107 970 aa14.88□□□□□ -0.03
TPM1-223ENST00000560445 SCML2Q9UQR0 700 aa14.88□□□□□ -0.03
TPM1-223ENST00000560445 PCDHGA5Q9Y5G8 931 aa14.88□□□□□ -0.03
TPM1-223ENST00000560445 AXIN1O15169 862 aa14.87□□□□□ -0.03
TPM1-223ENST00000560445 RHOBTB1O94844 696 aa14.87□□□□□ -0.03
TPM1-223ENST00000560445 CYP17A1P05093 508 aa14.87□□□□□ -0.03
TPM1-223ENST00000560445 CD58P19256 250 aa14.87□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms