RNA–Protein interactions for RNA: ENST00000560371.5

TRAF3-208, Transcript of TNF receptor associated factor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAF3, Length 7,640 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3-208ENST00000560371 CARSP49589 748 aaKnown RBP13.93□□□□□ -0.18
TRAF3-208ENST00000560371 EFL1Q7Z2Z2 1120 aaKnown RBP13.93□□□□□ -0.18
TRAF3-208ENST00000560371 ZNF410Q86VK4 478 aa13.93□□□□□ -0.18
TRAF3-208ENST00000560371 CYP2W1Q8TAV3 490 aa13.93□□□□□ -0.18
TRAF3-208ENST00000560371 SGSM3Q96HU1 749 aa13.93□□□□□ -0.18
TRAF3-208ENST00000560371 SYT15Q9BQS2 421 aa13.93□□□□□ -0.18
TRAF3-208ENST00000560371 IL25Q9H293 177 aa13.93□□□□□ -0.18
TRAF3-208ENST00000560371 CRTAMO95727 393 aa13.93□□□□□ -0.18
TRAF3-208ENST00000560371 NFKBIZQ9BYH8 718 aa13.93□□□□□ -0.18
TRAF3-208ENST00000560371 RNF112Q9ULX5 631 aa13.93□□□□□ -0.18
TRAF3-208ENST00000560371 RAD51CO43502 376 aa13.93□□□□□ -0.18
TRAF3-208ENST00000560371 HSPA1AP0DMV8 641 aaKnown RBP13.93□□□□□ -0.18
TRAF3-208ENST00000560371 HSPA1BP0DMV9 641 aaKnown RBP13.93□□□□□ -0.18
TRAF3-208ENST00000560371 IGFBP4P22692 258 aa13.93□□□□□ -0.18
TRAF3-208ENST00000560371 AXLP30530 894 aa13.93□□□□□ -0.18
TRAF3-208ENST00000560371 HDAC4P56524 1084 aa13.93□□□□□ -0.18
TRAF3-208ENST00000560371 OCA2Q04671 838 aa13.93□□□□□ -0.18
TRAF3-208ENST00000560371 RANBP17Q9H2T7 1088 aaKnown RBP13.93□□□□□ -0.18
TRAF3-208ENST00000560371 XYLBO75191 536 aa13.92□□□□□ -0.18
TRAF3-208ENST00000560371 ADCYAP1R1P41586 468 aa13.92□□□□□ -0.18
TRAF3-208ENST00000560371 SOX10P56693 466 aa13.92□□□□□ -0.18
TRAF3-208ENST00000560371 GUCY1A3Q02108 690 aa13.92□□□□□ -0.18
TRAF3-208ENST00000560371 PLCL1Q15111 1095 aa13.92□□□□□ -0.18
TRAF3-208ENST00000560371 DEFB115Q30KQ5 88 aa13.92□□□□□ -0.18
TRAF3-208ENST00000560371 PJA2O43164 708 aa13.92□□□□□ -0.18
TRAF3-208ENST00000560371 APOA4P06727 396 aa13.92□□□□□ -0.18
TRAF3-208ENST00000560371 ALOX15P16050 662 aaPredicted RBP13.92□□□□□ -0.18
TRAF3-208ENST00000560371 CDH2P19022 906 aaPredicted RBP13.92□□□□□ -0.18
TRAF3-208ENST00000560371 COILP38432 576 aaPredicted RBP13.92□□□□□ -0.18
TRAF3-208ENST00000560371 RHOAP61586 193 aa13.92□□□□□ -0.18
TRAF3-208ENST00000560371 DENND5BQ6ZUT9 1274 aa13.92□□□□□ -0.18
TRAF3-208ENST00000560371 CMTM5Q96DZ9 223 aa13.92□□□□□ -0.18
TRAF3-208ENST00000560371 FRMD8P1Q9BZ68 369 aaPredicted RBP13.92□□□□□ -0.18
TRAF3-208ENST00000560371 LSM8O95777 96 aaKnown RBP13.92□□□□□ -0.18
TRAF3-208ENST00000560371 C3orf67Q6ZVT6 689 aa13.92□□□□□ -0.18
TRAF3-208ENST00000560371 NT5DC4Q86YG4 428 aa13.92□□□□□ -0.18
TRAF3-208ENST00000560371 B4GALNT2Q8NHY0 566 aa13.92□□□□□ -0.18
TRAF3-208ENST00000560371 RXFP2Q8WXD0 754 aa13.92□□□□□ -0.18
TRAF3-208ENST00000560371 ZFYVE19Q96K21 471 aa13.92□□□□□ -0.18
TRAF3-208ENST00000560371 FBXL21Q9UKT6 434 aa13.92□□□□□ -0.18
TRAF3-208ENST00000560371 AP4E1Q9UPM8 1137 aa13.92□□□□□ -0.18
TRAF3-208ENST00000560371 CNGA3Q16281 694 aa13.92□□□□□ -0.18
TRAF3-208ENST00000560371 IGFLR1Q9H665 355 aa13.92□□□□□ -0.18
TRAF3-208ENST00000560371 NT5MQ9NPB1 228 aa13.92□□□□□ -0.18
TRAF3-208ENST00000560371 IL17RBQ9NRM6 502 aa13.92□□□□□ -0.18
TRAF3-208ENST00000560371 VPS26AO75436 327 aa13.92□□□□□ -0.18
TRAF3-208ENST00000560371 GZMAP12544 262 aa13.92□□□□□ -0.18
TRAF3-208ENST00000560371 POLE2P56282 527 aa13.92□□□□□ -0.18
TRAF3-208ENST00000560371 SP3Q02447 781 aa13.92□□□□□ -0.18
TRAF3-208ENST00000560371 ADIGQ0VDE8 80 aa13.92□□□□□ -0.18
TRAF3-208ENST00000560371 DDX39BQ13838 428 aaKnown RBP13.92□□□□□ -0.18
TRAF3-208ENST00000560371 RAD9BQ6WBX8 426 aa13.92□□□□□ -0.18
TRAF3-208ENST00000560371 NIPA1Q7RTP0 329 aa13.92□□□□□ -0.18
TRAF3-208ENST00000560371 SPATA21Q7Z572 469 aa13.92□□□□□ -0.18
TRAF3-208ENST00000560371 SLC13A5Q86YT5 568 aaPredicted RBP13.92□□□□□ -0.18
TRAF3-208ENST00000560371 KCNQ5Q9NR82 932 aa13.92□□□□□ -0.18
TRAF3-208ENST00000560371 GID8Q9NWU2 228 aa13.92□□□□□ -0.18
TRAF3-208ENST00000560371 ZMYM2Q9UBW7 1377 aa13.92□□□□□ -0.18
TRAF3-208ENST00000560371 KIF1AQ12756 1690 aa13.92□□□□□ -0.18
TRAF3-208ENST00000560371 SDR42E2A6NKP2 422 aa13.92□□□□□ -0.18
TRAF3-208ENST00000560371 MTA1Q13330 715 aa13.92□□□□□ -0.18
TRAF3-208ENST00000560371 PPIL2Q13356 520 aa13.92□□□□□ -0.18
TRAF3-208ENST00000560371 SMARCD1Q96GM5 515 aa13.92□□□□□ -0.18
TRAF3-208ENST00000560371 PLEKHA8Q96JA3 519 aa13.92□□□□□ -0.18
TRAF3-208ENST00000560371 ATXN3LQ9H3M9 355 aa13.92□□□□□ -0.18
TRAF3-208ENST00000560371 ARL2BPQ9Y2Y0 163 aa13.92□□□□□ -0.18
TRAF3-208ENST00000560371 MYPNQ86TC9 1320 aa13.91□□□□□ -0.18
TRAF3-208ENST00000560371 DYRK3O43781 588 aa13.91□□□□□ -0.18
TRAF3-208ENST00000560371 PLEKP08567 350 aaPredicted RBP13.91□□□□□ -0.18
TRAF3-208ENST00000560371 OTOP1Q7RTM1 612 aa13.91□□□□□ -0.18
TRAF3-208ENST00000560371 ABTB1Q969K4 478 aaPredicted RBP13.91□□□□□ -0.18
TRAF3-208ENST00000560371 TOB1P50616 345 aaPredicted RBP13.91□□□□□ -0.18
TRAF3-208ENST00000560371 CLEC4FQ8N1N0 589 aa13.91□□□□□ -0.18
TRAF3-208ENST00000560371 CCDC33Q8N5R6 958 aa13.91□□□□□ -0.18
TRAF3-208ENST00000560371 USP38Q8NB14 1042 aa13.91□□□□□ -0.18
TRAF3-208ENST00000560371 EDEM1Q92611 657 aa13.91□□□□□ -0.18
TRAF3-208ENST00000560371 CAPN10Q9HC96 672 aa13.91□□□□□ -0.18
TRAF3-208ENST00000560371 PNMA8BQ9ULN7 279 aaPredicted RBP13.91□□□□□ -0.18
TRAF3-208ENST00000560371 ADCY3O60266 1144 aa13.91□□□□□ -0.18
TRAF3-208ENST00000560371 AKAP3O75969 853 aa13.91□□□□□ -0.18
TRAF3-208ENST00000560371 TAL1P17542 331 aaPredicted RBP13.91□□□□□ -0.18
TRAF3-208ENST00000560371 OR1E1P30953 314 aa13.91□□□□□ -0.18
TRAF3-208ENST00000560371 CXCL17Q6UXB2 119 aa13.91□□□□□ -0.18
TRAF3-208ENST00000560371 TRAPPC12Q8WVT3 735 aa13.91□□□□□ -0.18
TRAF3-208ENST00000560371 FAM163AQ96GL9 167 aaPredicted RBP13.91□□□□□ -0.18
TRAF3-208ENST00000560371 NCAM2O15394 837 aa13.91□□□□□ -0.18
TRAF3-208ENST00000560371 RTN3O95197 1032 aaPredicted RBP13.91□□□□□ -0.18
TRAF3-208ENST00000560371 MAPTP10636 758 aaKnown RBP13.91□□□□□ -0.18
TRAF3-208ENST00000560371 PBLDP30039 288 aaPredicted RBP13.91□□□□□ -0.18
TRAF3-208ENST00000560371 SCNN1BP51168 640 aa13.91□□□□□ -0.18
TRAF3-208ENST00000560371 NDST1P52848 882 aa13.91□□□□□ -0.18
TRAF3-208ENST00000560371 BEX3Q00994 111 aa13.91□□□□□ -0.18
TRAF3-208ENST00000560371 NOGQ13253 232 aa13.91□□□□□ -0.18
TRAF3-208ENST00000560371 PTPAQ15257 358 aa13.91□□□□□ -0.18
TRAF3-208ENST00000560371 DENND1BQ6P3S1 775 aa13.91□□□□□ -0.18
TRAF3-208ENST00000560371 DDX4Q9NQI0 724 aaKnown RBP13.91□□□□□ -0.18
TRAF3-208ENST00000560371 FZD1Q9UP38 647 aa13.91□□□□□ -0.18
TRAF3-208ENST00000560371 TUFMP49411 452 aaKnown RBP13.91□□□□□ -0.18
TRAF3-208ENST00000560371 AASDHQ4L235 1098 aaPredicted RBP13.91□□□□□ -0.18
TRAF3-208ENST00000560371 KAT2BQ92831 832 aa13.91□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms