RNA–Protein interactions for RNA: ENST00000560269.1

HMBOX1-213, Transcript of homeobox containing 1, humanhuman

TSL 4

Gene HMBOX1, Length 569 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMBOX1-213ENST00000560269 NSUN3Q9H649 340 aaKnown RBP14.35□□□□□ -0.11
HMBOX1-213ENST00000560269 PARVAQ9NVD7 372 aa14.35□□□□□ -0.11
HMBOX1-213ENST00000560269 DPP7Q9UHL4 492 aa14.35□□□□□ -0.11
HMBOX1-213ENST00000560269 HCFC2Q9Y5Z7 792 aa14.35□□□□□ -0.11
HMBOX1-213ENST00000560269 SCINQ9Y6U3 715 aa14.35□□□□□ -0.11
HMBOX1-213ENST00000560269 TRIOBPQ9H2D6 2365 aa14.35□□□□□ -0.11
HMBOX1-213ENST00000560269 ZNF638Q14966 1978 aaKnown RBP14.34□□□□□ -0.11
HMBOX1-213ENST00000560269 MYO16Q9Y6X6 1858 aa14.34□□□□□ -0.11
HMBOX1-213ENST00000560269 CCP110O43303 1012 aa14.34□□□□□ -0.11
HMBOX1-213ENST00000560269 ATMINO43313 823 aaPredicted RBP14.34□□□□□ -0.11
HMBOX1-213ENST00000560269 ZMYND10O75800 440 aa14.34□□□□□ -0.11
HMBOX1-213ENST00000560269 MTA2O94776 668 aa14.34□□□□□ -0.11
HMBOX1-213ENST00000560269 ZBED1O96006 694 aa14.34□□□□□ -0.11
HMBOX1-213ENST00000560269 C8AP07357 584 aa14.34□□□□□ -0.11
HMBOX1-213ENST00000560269 POU3F3P20264 500 aaPredicted RBP14.34□□□□□ -0.11
HMBOX1-213ENST00000560269 HOXA9P31269 272 aa14.34□□□□□ -0.11
HMBOX1-213ENST00000560269 NRIP1P48552 1158 aa14.34□□□□□ -0.11
HMBOX1-213ENST00000560269 EPHB3P54753 998 aa14.34□□□□□ -0.11
HMBOX1-213ENST00000560269 HADHBP55084 474 aaKnown RBP14.34□□□□□ -0.11
HMBOX1-213ENST00000560269 USP46P62068 366 aa14.34□□□□□ -0.11
HMBOX1-213ENST00000560269 MRPS5P82675 430 aaKnown RBP14.34□□□□□ -0.11
HMBOX1-213ENST00000560269 TWF1Q12792 350 aa14.34□□□□□ -0.11
HMBOX1-213ENST00000560269 MAMLD1Q13495 774 aa14.34□□□□□ -0.11
HMBOX1-213ENST00000560269 GRIN2CQ14957 1233 aa14.34□□□□□ -0.11
HMBOX1-213ENST00000560269 VEPH1Q14D04 833 aa14.34□□□□□ -0.11
HMBOX1-213ENST00000560269 LLGL2Q6P1M3 1020 aa14.34□□□□□ -0.11
HMBOX1-213ENST00000560269 SLC26A9Q7LBE3 791 aa14.34□□□□□ -0.11
HMBOX1-213ENST00000560269 BHLHA9Q7RTU4 235 aa14.34□□□□□ -0.11
HMBOX1-213ENST00000560269 RBM23Q86U06 439 aaKnown RBP14.34□□□□□ -0.11
HMBOX1-213ENST00000560269 RHOT2Q8IXI1 618 aa14.34□□□□□ -0.11
HMBOX1-213ENST00000560269 GPR152Q8TDT2 470 aa14.34□□□□□ -0.11
HMBOX1-213ENST00000560269 GIPC2Q8TF65 315 aa14.34□□□□□ -0.11
HMBOX1-213ENST00000560269 CLEC4CQ8WTT0 213 aa14.34□□□□□ -0.11
HMBOX1-213ENST00000560269 KHSRPQ92945 711 aaKnown RBP eCLIP14.34□□□□□ -0.113e-6■■□□□ 11.9
HMBOX1-213ENST00000560269 PPP2R3CQ969Q6 453 aa14.34□□□□□ -0.11
HMBOX1-213ENST00000560269 MYRFLQ96LU7 910 aa14.34□□□□□ -0.11
HMBOX1-213ENST00000560269 MRPL47Q9HD33 250 aaKnown RBP14.34□□□□□ -0.11
HMBOX1-213ENST00000560269 ASNSD1Q9NWL6 643 aa14.34□□□□□ -0.11
HMBOX1-213ENST00000560269 EHD2Q9NZN4 543 aa14.34□□□□□ -0.11
HMBOX1-213ENST00000560269 UVRAGQ9P2Y5 699 aa14.34□□□□□ -0.11
HMBOX1-213ENST00000560269 MYO1AQ9UBC5 1043 aa14.34□□□□□ -0.11
HMBOX1-213ENST00000560269 SCML2Q9UQR0 700 aa14.34□□□□□ -0.11
HMBOX1-213ENST00000560269 ASB3Q9Y575 518 aa14.34□□□□□ -0.11
HMBOX1-213ENST00000560269 MYO7AQ13402 2215 aa14.33□□□□□ -0.12
HMBOX1-213ENST00000560269 GOLGA6L9A6NEM1 432 aa14.33□□□□□ -0.12
HMBOX1-213ENST00000560269 SIGLEC16A6NMB1 481 aa14.33□□□□□ -0.12
HMBOX1-213ENST00000560269 USP27XA6NNY8 438 aa14.33□□□□□ -0.12
HMBOX1-213ENST00000560269 GOLGA8SH3BPF8 625 aa14.33□□□□□ -0.12
HMBOX1-213ENST00000560269 SART1O43290 800 aaKnown RBP14.33□□□□□ -0.12
HMBOX1-213ENST00000560269 KRT86O43790 486 aa14.33□□□□□ -0.12
HMBOX1-213ENST00000560269 PAPLNO95428 1278 aa14.33□□□□□ -0.12
HMBOX1-213ENST00000560269 ABL1P00519 1130 aa14.33□□□□□ -0.12
HMBOX1-213ENST00000560269 LRG1P02750 347 aa14.33□□□□□ -0.12
HMBOX1-213ENST00000560269 GLI1P08151 1106 aa14.33□□□□□ -0.12
HMBOX1-213ENST00000560269 POU2F2P09086 479 aa14.33□□□□□ -0.12
HMBOX1-213ENST00000560269 USP17L7P0C7H9 530 aa14.33□□□□□ -0.12
HMBOX1-213ENST00000560269 CSH1P0DML2 217 aa14.33□□□□□ -0.12
HMBOX1-213ENST00000560269 CSH2P0DML3 217 aa14.33□□□□□ -0.12
HMBOX1-213ENST00000560269 HMGA1P17096 107 aaKnown RBP14.33□□□□□ -0.12
HMBOX1-213ENST00000560269 YWHAQP27348 245 aa14.33□□□□□ -0.12
HMBOX1-213ENST00000560269 MTMR3Q13615 1198 aa14.33□□□□□ -0.12
HMBOX1-213ENST00000560269 EFHC1Q5JVL4 640 aa14.33□□□□□ -0.12
HMBOX1-213ENST00000560269 FAM102AQ5T9C2 384 aaPredicted RBP14.33□□□□□ -0.12
HMBOX1-213ENST00000560269 ZNF697Q5TEC3 545 aa14.33□□□□□ -0.12
HMBOX1-213ENST00000560269 DNAJC24Q6P3W2 148 aa14.33□□□□□ -0.12
HMBOX1-213ENST00000560269 ELMSAN1Q6PJG2 1045 aa14.33□□□□□ -0.12
HMBOX1-213ENST00000560269 ARCQ7LC44 396 aa14.33□□□□□ -0.12
HMBOX1-213ENST00000560269 PHLDB2Q86SQ0 1253 aa14.33□□□□□ -0.12
HMBOX1-213ENST00000560269 STKLD1Q8NE28 680 aa14.33□□□□□ -0.12
HMBOX1-213ENST00000560269 SLC35G2Q8TBE7 412 aa14.33□□□□□ -0.12
HMBOX1-213ENST00000560269 PSMG2Q969U7 264 aa14.33□□□□□ -0.12
HMBOX1-213ENST00000560269 TRMT2BQ96GJ1 504 aaKnown RBP14.33□□□□□ -0.12
HMBOX1-213ENST00000560269 LRCH3Q96II8 777 aa14.33□□□□□ -0.12
HMBOX1-213ENST00000560269 PIWIL1Q96J94 861 aaKnown RBP14.33□□□□□ -0.12
HMBOX1-213ENST00000560269 CALR3Q96L12 384 aaKnown RBP14.33□□□□□ -0.12
HMBOX1-213ENST00000560269 SELENOOQ9BVL4 669 aa14.33□□□□□ -0.12
HMBOX1-213ENST00000560269 NUP85Q9BW27 656 aa14.33□□□□□ -0.12
HMBOX1-213ENST00000560269 MAN1C1Q9NR34 630 aa14.33□□□□□ -0.12
HMBOX1-213ENST00000560269 ZDHHC7Q9NXF8 308 aa14.33□□□□□ -0.12
HMBOX1-213ENST00000560269 TRMT1Q9NXH9 659 aaKnown RBP14.33□□□□□ -0.12
HMBOX1-213ENST00000560269 CTTNBP2NLQ9P2B4 639 aa14.33□□□□□ -0.12
HMBOX1-213ENST00000560269 TRIM10Q9UDY6 481 aa14.33□□□□□ -0.12
HMBOX1-213ENST00000560269 CHORDC1Q9UHD1 332 aaPredicted RBP14.33□□□□□ -0.12
HMBOX1-213ENST00000560269 SALL4Q9UJQ4 1053 aa14.33□□□□□ -0.12
HMBOX1-213ENST00000560269 TMEM59LQ9UK28 342 aa14.33□□□□□ -0.12
HMBOX1-213ENST00000560269 COG5Q9UP83 839 aa14.33□□□□□ -0.12
HMBOX1-213ENST00000560269 DUSP10Q9Y6W6 482 aa14.33□□□□□ -0.12
HMBOX1-213ENST00000560269 TMEM191CA6NGB0 347 aa14.32□□□□□ -0.12
HMBOX1-213ENST00000560269 HNRNPA1P09651 372 aaKnown RBP eCLIP14.32□□□□□ -0.12
HMBOX1-213ENST00000560269 KRT3P12035 628 aa14.32□□□□□ -0.12
HMBOX1-213ENST00000560269 ARHGAP29Q52LW3 1261 aa14.32□□□□□ -0.12
HMBOX1-213ENST00000560269 PPM1LQ5SGD2 360 aa14.32□□□□□ -0.12
HMBOX1-213ENST00000560269 BEND5Q7L4P6 421 aa14.32□□□□□ -0.12
HMBOX1-213ENST00000560269 ITIH5Q86UX2 942 aa14.32□□□□□ -0.12
HMBOX1-213ENST00000560269 ZSCAN30Q86W11 494 aa14.32□□□□□ -0.12
HMBOX1-213ENST00000560269 RNF10Q8N5U6 811 aaKnown RBP14.32□□□□□ -0.12
HMBOX1-213ENST00000560269 FEZF2Q8TBJ5 459 aa14.32□□□□□ -0.12
HMBOX1-213ENST00000560269 ZNF564Q8TBZ8 553 aaPredicted RBP14.32□□□□□ -0.12
HMBOX1-213ENST00000560269 OVCA2Q8WZ82 227 aa14.32□□□□□ -0.12
HMBOX1-213ENST00000560269 NDRG1Q92597 394 aaKnown RBP14.32□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms