RNA–Protein interactions for RNA: ENST00000560207.1

RABGGTA-215, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 3

Gene RABGGTA, Length 678 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-215ENST00000560207 CCDC142Q17RM4 750 aa12.69□□□□□ -0.38
RABGGTA-215ENST00000560207 HECTD3Q5T447 861 aa12.69□□□□□ -0.38
RABGGTA-215ENST00000560207 GAREM2Q75VX8 874 aa12.69□□□□□ -0.38
RABGGTA-215ENST00000560207 BEND5Q7L4P6 421 aa12.69□□□□□ -0.38
RABGGTA-215ENST00000560207 TMEM110Q86TL2 294 aa12.69□□□□□ -0.38
RABGGTA-215ENST00000560207 CNGA4Q8IV77 575 aa12.69□□□□□ -0.38
RABGGTA-215ENST00000560207 VSTM4Q8IW00 320 aa12.69□□□□□ -0.38
RABGGTA-215ENST00000560207 HS6ST3Q8IZP7 471 aa12.69□□□□□ -0.38
RABGGTA-215ENST00000560207 C1orf131Q8NDD1 294 aaKnown RBP12.69□□□□□ -0.38
RABGGTA-215ENST00000560207 SHKBP1Q8TBC3 707 aa12.69□□□□□ -0.38
RABGGTA-215ENST00000560207 EPS8L1Q8TE68 723 aa12.69□□□□□ -0.38
RABGGTA-215ENST00000560207 IPO4Q8TEX9 1081 aaKnown RBP12.69□□□□□ -0.38
RABGGTA-215ENST00000560207 SMARCD2Q92925 531 aa12.69□□□□□ -0.38
RABGGTA-215ENST00000560207 SECISBP2LQ93073 1101 aaKnown RBP12.69□□□□□ -0.38
RABGGTA-215ENST00000560207 RPGRIP1Q96KN7 1286 aa12.69□□□□□ -0.38
RABGGTA-215ENST00000560207 RBSNQ9H1K0 784 aa12.69□□□□□ -0.38
RABGGTA-215ENST00000560207 SLITRK6Q9H5Y7 841 aa12.69□□□□□ -0.38
RABGGTA-215ENST00000560207 ZFP14Q9HCL3 533 aa12.69□□□□□ -0.38
RABGGTA-215ENST00000560207 ZNHIT6Q9NWK9 470 aaKnown RBP12.69□□□□□ -0.38
RABGGTA-215ENST00000560207 COL6A3P12111 3177 aa12.68□□□□□ -0.38
RABGGTA-215ENST00000560207 GOLGA6L6A8MZA4 724 aa12.68□□□□□ -0.38
RABGGTA-215ENST00000560207 EPHB6O15197 1021 aa12.68□□□□□ -0.38
RABGGTA-215ENST00000560207 ECI2O75521 394 aa12.68□□□□□ -0.38
RABGGTA-215ENST00000560207 BEST1O76090 585 aa12.68□□□□□ -0.38
RABGGTA-215ENST00000560207 GLI1P08151 1106 aa12.68□□□□□ -0.38
RABGGTA-215ENST00000560207 TCF3P15923 654 aa12.68□□□□□ -0.38
RABGGTA-215ENST00000560207 SCNN1AP37088 669 aa12.68□□□□□ -0.38
RABGGTA-215ENST00000560207 TKTL1P51854 596 aa12.68□□□□□ -0.38
RABGGTA-215ENST00000560207 KPNA1P52294 538 aaPredicted RBP12.68□□□□□ -0.38
RABGGTA-215ENST00000560207 ASIC2Q16515 512 aa12.68□□□□□ -0.38
RABGGTA-215ENST00000560207 SLC5A9Q2M3M2 681 aa12.68□□□□□ -0.38
RABGGTA-215ENST00000560207 EFHC1Q5JVL4 640 aa12.68□□□□□ -0.38
RABGGTA-215ENST00000560207 GPR158Q5T848 1215 aa12.68□□□□□ -0.38
RABGGTA-215ENST00000560207 TOGARAM2Q6ZUX3 1019 aa12.68□□□□□ -0.38
RABGGTA-215ENST00000560207 CMTM8Q8IZV2 173 aa12.68□□□□□ -0.38
RABGGTA-215ENST00000560207 GJD3Q8N144 294 aa12.68□□□□□ -0.38
RABGGTA-215ENST00000560207 CELF5Q8N6W0 485 aaKnown RBP12.68□□□□□ -0.38
RABGGTA-215ENST00000560207 ITFG1Q8TB96 612 aa12.68□□□□□ -0.38
RABGGTA-215ENST00000560207 UBA3Q8TBC4 463 aa12.68□□□□□ -0.38
RABGGTA-215ENST00000560207 GPR152Q8TDT2 470 aa12.68□□□□□ -0.38
RABGGTA-215ENST00000560207 DEPDC1BQ8WUY9 529 aa12.68□□□□□ -0.38
RABGGTA-215ENST00000560207 BAP1Q92560 729 aa12.68□□□□□ -0.38
RABGGTA-215ENST00000560207 ELSPBP1Q96BH3 223 aa12.68□□□□□ -0.38
RABGGTA-215ENST00000560207 SLC4A5Q9BY07 1137 aa12.68□□□□□ -0.38
RABGGTA-215ENST00000560207 ZNF334Q9HCZ1 680 aaPredicted RBP12.68□□□□□ -0.38
RABGGTA-215ENST00000560207 ABCC13Q9NSE7 274 aa12.68□□□□□ -0.38
RABGGTA-215ENST00000560207 TMEM30AQ9NV96 361 aa12.68□□□□□ -0.38
RABGGTA-215ENST00000560207 AJAP1Q9UKB5 411 aaPredicted RBP12.68□□□□□ -0.38
RABGGTA-215ENST00000560207 STRIP2Q9ULQ0 834 aa12.68□□□□□ -0.38
RABGGTA-215ENST00000560207 LRRC53A6NM62 1247 aa12.67□□□□□ -0.38
RABGGTA-215ENST00000560207 ANHXE9PGG2 379 aa12.67□□□□□ -0.38
RABGGTA-215ENST00000560207 DPYSL4O14531 572 aa12.67□□□□□ -0.38
RABGGTA-215ENST00000560207 MOSPD3O75425 235 aa12.67□□□□□ -0.38
RABGGTA-215ENST00000560207 HDCP19113 662 aa12.67□□□□□ -0.38
RABGGTA-215ENST00000560207 HNRNPH3P31942 346 aaKnown RBP12.67□□□□□ -0.38
RABGGTA-215ENST00000560207 ATP5C1P36542 298 aaKnown RBP12.67□□□□□ -0.38
RABGGTA-215ENST00000560207 NTHL1P78549 312 aa12.67□□□□□ -0.38
RABGGTA-215ENST00000560207 MTA1Q13330 715 aa12.67□□□□□ -0.38
RABGGTA-215ENST00000560207 PDCLQ13371 301 aa12.67□□□□□ -0.38
RABGGTA-215ENST00000560207 MTMR3Q13615 1198 aa12.67□□□□□ -0.38
RABGGTA-215ENST00000560207 ARID5BQ14865 1188 aa12.67□□□□□ -0.38
RABGGTA-215ENST00000560207 TEAD2Q15562 447 aa12.67□□□□□ -0.38
RABGGTA-215ENST00000560207 SDHAF4Q5VUM1 108 aa12.67□□□□□ -0.38
RABGGTA-215ENST00000560207 PMF1Q6P1K2 205 aa12.67□□□□□ -0.38
RABGGTA-215ENST00000560207 IRF2BP2Q7Z5L9 587 aa12.67□□□□□ -0.38
RABGGTA-215ENST00000560207 UBALD2Q8IYN6 164 aa12.67□□□□□ -0.38
RABGGTA-215ENST00000560207 OR8K1Q8NGG5 319 aa12.67□□□□□ -0.38
RABGGTA-215ENST00000560207 SCAMP5Q8TAC9 235 aa12.67□□□□□ -0.38
RABGGTA-215ENST00000560207 ZSCAN18Q8TBC5 510 aaPredicted RBP12.67□□□□□ -0.38
RABGGTA-215ENST00000560207 ADAMTS19Q8TE59 1207 aa12.67□□□□□ -0.38
RABGGTA-215ENST00000560207 DDX1Q92499 740 aaKnown RBP12.67□□□□□ -0.38
RABGGTA-215ENST00000560207 VCPIP1Q96JH7 1222 aa12.67□□□□□ -0.38
RABGGTA-215ENST00000560207 PPP1R13BQ96KQ4 1090 aa12.67□□□□□ -0.38
RABGGTA-215ENST00000560207 ASB16Q96NS5 453 aa12.67□□□□□ -0.38
RABGGTA-215ENST00000560207 MYADMQ96S97 322 aa12.67□□□□□ -0.38
RABGGTA-215ENST00000560207 AGPAT1Q99943 283 aa12.67□□□□□ -0.38
RABGGTA-215ENST00000560207 ZSWIM1Q9BR11 485 aa12.67□□□□□ -0.38
RABGGTA-215ENST00000560207 SYNCQ9H7C4 482 aa12.67□□□□□ -0.38
RABGGTA-215ENST00000560207 ST7Q9NRC1 585 aa12.67□□□□□ -0.38
RABGGTA-215ENST00000560207 TDP1Q9NUW8 608 aa12.67□□□□□ -0.38
RABGGTA-215ENST00000560207 ASNSD1Q9NWL6 643 aa12.67□□□□□ -0.38
RABGGTA-215ENST00000560207 THG1LQ9NWX6 298 aaKnown RBP12.67□□□□□ -0.38
RABGGTA-215ENST00000560207 WDR35Q9P2L0 1181 aa12.67□□□□□ -0.38
RABGGTA-215ENST00000560207 NOCTQ9UK39 431 aaKnown RBP12.67□□□□□ -0.38
RABGGTA-215ENST00000560207 C2CD4DB7Z1M9 353 aa12.66□□□□□ -0.38
RABGGTA-215ENST00000560207 OLFM2O95897 454 aa12.66□□□□□ -0.38
RABGGTA-215ENST00000560207 SERPING1P05155 500 aa12.66□□□□□ -0.38
RABGGTA-215ENST00000560207 CKMP06732 381 aa12.66□□□□□ -0.38
RABGGTA-215ENST00000560207 GZMAP12544 262 aa12.66□□□□□ -0.38
RABGGTA-215ENST00000560207 CEBPBP17676 345 aa12.66□□□□□ -0.38
RABGGTA-215ENST00000560207 TNFAIP3P21580 790 aa12.66□□□□□ -0.38
RABGGTA-215ENST00000560207 SSTR3P32745 418 aaPredicted RBP12.66□□□□□ -0.38
RABGGTA-215ENST00000560207 CCR2P41597 374 aa12.66□□□□□ -0.38
RABGGTA-215ENST00000560207 NSFP46459 744 aaKnown RBP12.66□□□□□ -0.38
RABGGTA-215ENST00000560207 GABRB2P47870 512 aa12.66□□□□□ -0.38
RABGGTA-215ENST00000560207 USP46P62068 366 aa12.66□□□□□ -0.38
RABGGTA-215ENST00000560207 SLC7A9P82251 487 aa12.66□□□□□ -0.38
RABGGTA-215ENST00000560207 PFKPQ01813 784 aa12.66□□□□□ -0.38
RABGGTA-215ENST00000560207 KLHL30Q0D2K2 578 aa12.66□□□□□ -0.38
RABGGTA-215ENST00000560207 ADIGQ0VDE8 80 aa12.66□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms