RNA–Protein interactions for RNA: ENST00000559873.5

USP3-216, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 5

Gene USP3, Length 584 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-216ENST00000559873 LCP1P13796 627 aa10.6□□□□□ -0.71
USP3-216ENST00000559873 IL9P15248 144 aa10.6□□□□□ -0.71
USP3-216ENST00000559873 TNFAIP3P21580 790 aa10.6□□□□□ -0.71
USP3-216ENST00000559873 SSTR3P32745 418 aaPredicted RBP10.6□□□□□ -0.71
USP3-216ENST00000559873 AVPR1AP37288 418 aa10.6□□□□□ -0.71
USP3-216ENST00000559873 RGS7P49802 495 aa10.6□□□□□ -0.71
USP3-216ENST00000559873 TUBP50607 506 aa10.6□□□□□ -0.71
USP3-216ENST00000559873 KCNQ1P51787 676 aa10.6□□□□□ -0.71
USP3-216ENST00000559873 USP46P62068 366 aa10.6□□□□□ -0.71
USP3-216ENST00000559873 SLC5A9Q2M3M2 681 aa10.6□□□□□ -0.71
USP3-216ENST00000559873 PMF1Q6P1K2 205 aa10.6□□□□□ -0.71
USP3-216ENST00000559873 TOGARAM2Q6ZUX3 1019 aa10.6□□□□□ -0.71
USP3-216ENST00000559873 MTSS1LQ765P7 747 aa10.6□□□□□ -0.71
USP3-216ENST00000559873 GPRIN1Q7Z2K8 1008 aa10.6□□□□□ -0.71
USP3-216ENST00000559873 MON1AQ86VX9 555 aa10.6□□□□□ -0.71
USP3-216ENST00000559873 ZDHHC17Q8IUH5 632 aa10.6□□□□□ -0.71
USP3-216ENST00000559873 NPAS3Q8IXF0 933 aa10.6□□□□□ -0.71
USP3-216ENST00000559873 HS6ST3Q8IZP7 471 aa10.6□□□□□ -0.71
USP3-216ENST00000559873 SCAMP5Q8TAC9 235 aa10.6□□□□□ -0.71
USP3-216ENST00000559873 SHKBP1Q8TBC3 707 aa10.6□□□□□ -0.71
USP3-216ENST00000559873 IRGQQ8WZA9 623 aa10.6□□□□□ -0.71
USP3-216ENST00000559873 DDX1Q92499 740 aaKnown RBP10.6□□□□□ -0.71
USP3-216ENST00000559873 FGF13Q92913 245 aa10.6□□□□□ -0.71
USP3-216ENST00000559873 PPP1R13BQ96KQ4 1090 aa10.6□□□□□ -0.71
USP3-216ENST00000559873 ASB2Q96Q27 587 aa10.6□□□□□ -0.71
USP3-216ENST00000559873 DNAJC7Q99615 494 aa10.6□□□□□ -0.71
USP3-216ENST00000559873 LRRC3Q9BY71 257 aa10.6□□□□□ -0.71
USP3-216ENST00000559873 HAUS4Q9H6D7 363 aa10.6□□□□□ -0.71
USP3-216ENST00000559873 GRPEL1Q9HAV7 217 aa10.6□□□□□ -0.71
USP3-216ENST00000559873 IL21Q9HBE4 155 aa10.6□□□□□ -0.71
USP3-216ENST00000559873 IL37Q9NZH6 218 aa10.6□□□□□ -0.71
USP3-216ENST00000559873 IMPACTQ9P2X3 320 aa10.6□□□□□ -0.71
USP3-216ENST00000559873 CDH22Q9UJ99 828 aa10.6□□□□□ -0.71
USP3-216ENST00000559873 NAGPAQ9UK23 515 aa10.6□□□□□ -0.71
USP3-216ENST00000559873 STRIP2Q9ULQ0 834 aa10.6□□□□□ -0.71
USP3-216ENST00000559873 USP3Q9Y6I4 520 aa10.6□□□□□ -0.71
USP3-216ENST00000559873 TULP2O00295 520 aa10.59□□□□□ -0.71
USP3-216ENST00000559873 AP5Z1O43299 807 aa10.59□□□□□ -0.71
USP3-216ENST00000559873 ABL1P00519 1130 aa10.59□□□□□ -0.71
USP3-216ENST00000559873 F11P03951 625 aa10.59□□□□□ -0.71
USP3-216ENST00000559873 CALB1P05937 261 aa10.59□□□□□ -0.71
USP3-216ENST00000559873 CKMP06732 381 aa10.59□□□□□ -0.71
USP3-216ENST00000559873 CEBPBP17676 345 aa10.59□□□□□ -0.71
USP3-216ENST00000559873 HNRNPH3P31942 346 aaKnown RBP10.59□□□□□ -0.71
USP3-216ENST00000559873 RPL34P49207 117 aaKnown RBP10.59□□□□□ -0.71
USP3-216ENST00000559873 MRE11P49959 708 aa10.59□□□□□ -0.71
USP3-216ENST00000559873 NOMO3P69849 1222 aa10.59□□□□□ -0.71
USP3-216ENST00000559873 CYP4F8P98187 520 aa10.59□□□□□ -0.71
USP3-216ENST00000559873 FMO1Q01740 532 aa10.59□□□□□ -0.71
USP3-216ENST00000559873 CENPCQ03188 943 aa10.59□□□□□ -0.71
USP3-216ENST00000559873 ARID5BQ14865 1188 aa10.59□□□□□ -0.71
USP3-216ENST00000559873 TEAD2Q15562 447 aa10.59□□□□□ -0.71
USP3-216ENST00000559873 TJAP1Q5JTD0 557 aa10.59□□□□□ -0.71
USP3-216ENST00000559873 HECTD3Q5T447 861 aa10.59□□□□□ -0.71
USP3-216ENST00000559873 GPR158Q5T848 1215 aa10.59□□□□□ -0.71
USP3-216ENST00000559873 GAREM2Q75VX8 874 aa10.59□□□□□ -0.71
USP3-216ENST00000559873 IRF2BP2Q7Z5L9 587 aa10.59□□□□□ -0.71
USP3-216ENST00000559873 TMEM110Q86TL2 294 aa10.59□□□□□ -0.71
USP3-216ENST00000559873 ERICH1Q86X53 443 aa10.59□□□□□ -0.71
USP3-216ENST00000559873 GPIHBP1Q8IV16 184 aa10.59□□□□□ -0.71
USP3-216ENST00000559873 ADHFE1Q8IWW8 467 aa10.59□□□□□ -0.71
USP3-216ENST00000559873 ITFG1Q8TB96 612 aa10.59□□□□□ -0.71
USP3-216ENST00000559873 SLC20A1Q8WUM9 679 aa10.59□□□□□ -0.71
USP3-216ENST00000559873 ING5Q8WYH8 240 aa10.59□□□□□ -0.71
USP3-216ENST00000559873 E2F7Q96AV8 911 aa10.59□□□□□ -0.71
USP3-216ENST00000559873 RPGRIP1Q96KN7 1286 aa10.59□□□□□ -0.71
USP3-216ENST00000559873 SLC4A5Q9BY07 1137 aa10.59□□□□□ -0.71
USP3-216ENST00000559873 ULBP1Q9BZM6 244 aa10.59□□□□□ -0.71
USP3-216ENST00000559873 DEF6Q9H4E7 631 aa10.59□□□□□ -0.71
USP3-216ENST00000559873 TASP1Q9H6P5 420 aa10.59□□□□□ -0.71
USP3-216ENST00000559873 KIF9Q9HAQ2 790 aa10.59□□□□□ -0.71
USP3-216ENST00000559873 TRPC7Q9HCX4 862 aa10.59□□□□□ -0.71
USP3-216ENST00000559873 ABHD10Q9NUJ1 306 aa10.59□□□□□ -0.71
USP3-216ENST00000559873 CLIC5Q9NZA1 410 aa10.59□□□□□ -0.71
USP3-216ENST00000559873 GMIPQ9P107 970 aa10.59□□□□□ -0.71
USP3-216ENST00000559873 EPS15L1Q9UBC2 864 aa10.59□□□□□ -0.71
USP3-216ENST00000559873 MYO16Q9Y6X6 1858 aa10.58□□□□□ -0.72
USP3-216ENST00000559873 ZNF840PA6NDX5 716 aa10.58□□□□□ -0.72
USP3-216ENST00000559873 E5RJQ4 531 aa10.58□□□□□ -0.72
USP3-216ENST00000559873 DPYSL4O14531 572 aa10.58□□□□□ -0.72
USP3-216ENST00000559873 TADA3O75528 432 aa10.58□□□□□ -0.72
USP3-216ENST00000559873 CYP1A1P04798 512 aaPredicted RBP10.58□□□□□ -0.72
USP3-216ENST00000559873 USP17L7P0C7H9 530 aa10.58□□□□□ -0.72
USP3-216ENST00000559873 ZDHHC11BP0C7U3 371 aa10.58□□□□□ -0.72
USP3-216ENST00000559873 LAMP2P13473 410 aa10.58□□□□□ -0.72
USP3-216ENST00000559873 WEE1P30291 646 aa10.58□□□□□ -0.72
USP3-216ENST00000559873 SCNN1AP37088 669 aa10.58□□□□□ -0.72
USP3-216ENST00000559873 CCR2P41597 374 aa10.58□□□□□ -0.72
USP3-216ENST00000559873 DAOAP59103 153 aa10.58□□□□□ -0.72
USP3-216ENST00000559873 YWHAGP61981 247 aaKnown RBP eCLIP10.58□□□□□ -0.72
USP3-216ENST00000559873 GOLGA8FQ08AF8 430 aa10.58□□□□□ -0.72
USP3-216ENST00000559873 GOLGA8DPQ0D2H9 430 aa10.58□□□□□ -0.72
USP3-216ENST00000559873 TBX2Q13207 712 aaPredicted RBP10.58□□□□□ -0.72
USP3-216ENST00000559873 CLEC16AQ2KHT3 1053 aa10.58□□□□□ -0.72
USP3-216ENST00000559873 SNX30Q5VWJ9 437 aa10.58□□□□□ -0.72
USP3-216ENST00000559873 NAA35Q5VZE5 725 aa10.58□□□□□ -0.72
USP3-216ENST00000559873 BTBD8Q5XKL5 378 aa10.58□□□□□ -0.72
USP3-216ENST00000559873 E4F1Q66K89 784 aaPredicted RBP10.58□□□□□ -0.72
USP3-216ENST00000559873 PM20D1Q6GTS8 502 aa10.58□□□□□ -0.72
USP3-216ENST00000559873 RSRC2Q7L4I2 434 aaKnown RBP10.58□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms