RNA–Protein interactions for RNA: ENST00000559694.5

CARMIL3-202, Transcript of capping protein regulator and myosin 1 linker 3, humanhuman

TSL 5

Gene CARMIL3, Length 4,319 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CARMIL3-202ENST00000559694 FAM118BQ9BPY3 351 aa11.1□□□□□ -0.63
CARMIL3-202ENST00000559694 MUC3BQ9H195 1237 aa11.1□□□□□ -0.63
CARMIL3-202ENST00000559694 PDZD7Q9H5P4 517 aa11.1□□□□□ -0.63
CARMIL3-202ENST00000559694 C11orf49Q9H6J7 331 aa11.1□□□□□ -0.63
CARMIL3-202ENST00000559694 SLC28A3Q9HAS3 691 aa11.1□□□□□ -0.63
CARMIL3-202ENST00000559694 DMAP1Q9NPF5 467 aaPredicted RBP11.1□□□□□ -0.63
CARMIL3-202ENST00000559694 ADCY6O43306 1168 aa11.1□□□□□ -0.63
CARMIL3-202ENST00000559694 RGS20O76081 388 aa11.1□□□□□ -0.63
CARMIL3-202ENST00000559694 RPL9P32969 192 aaKnown RBP11.1□□□□□ -0.63
CARMIL3-202ENST00000559694 SH3BGRP55822 239 aaPredicted RBP11.1□□□□□ -0.63
CARMIL3-202ENST00000559694 SATB1Q01826 763 aa11.1□□□□□ -0.63
CARMIL3-202ENST00000559694 MBTD1Q05BQ5 628 aa11.1□□□□□ -0.63
CARMIL3-202ENST00000559694 TSTA3Q13630 321 aaPredicted RBP11.1□□□□□ -0.63
CARMIL3-202ENST00000559694 DAW1Q8N136 415 aa11.1□□□□□ -0.63
CARMIL3-202ENST00000559694 TTC25Q96NG3 672 aa11.1□□□□□ -0.63
CARMIL3-202ENST00000559694 AGAP3Q96P47 875 aa11.1□□□□□ -0.63
CARMIL3-202ENST00000559694 OSBPL1AQ9BXW6 950 aa11.1□□□□□ -0.63
CARMIL3-202ENST00000559694 STAU2Q9NUL3 570 aaKnown RBP eCLIP11.1□□□□□ -0.63
CARMIL3-202ENST00000559694 NUDT5Q9UKK9 219 aa11.1□□□□□ -0.63
CARMIL3-202ENST00000559694 MAPK13O15264 365 aa11.09□□□□□ -0.63
CARMIL3-202ENST00000559694 LGR5O75473 907 aa11.09□□□□□ -0.63
CARMIL3-202ENST00000559694 PARNO95453 639 aaKnown RBP11.09□□□□□ -0.63
CARMIL3-202ENST00000559694 F2P00734 622 aa11.09□□□□□ -0.63
CARMIL3-202ENST00000559694 PMLP29590 882 aa11.09□□□□□ -0.63
CARMIL3-202ENST00000559694 TM4SF4P48230 202 aa11.09□□□□□ -0.63
CARMIL3-202ENST00000559694 SLC11A2P49281 568 aa11.09□□□□□ -0.63
CARMIL3-202ENST00000559694 MCL1Q07820 350 aa11.09□□□□□ -0.63
CARMIL3-202ENST00000559694 DCLRE1AQ6PJP8 1040 aa11.09□□□□□ -0.63
CARMIL3-202ENST00000559694 TBRG4Q969Z0 631 aaKnown RBP eCLIP11.09□□□□□ -0.63
CARMIL3-202ENST00000559694 SMARCD1Q96GM5 515 aa11.09□□□□□ -0.63
CARMIL3-202ENST00000559694 TTC1Q99614 292 aa11.09□□□□□ -0.63
CARMIL3-202ENST00000559694 NTPCRQ9BSD7 190 aaKnown RBP11.09□□□□□ -0.63
CARMIL3-202ENST00000559694 ELOVL4Q9GZR5 314 aa11.09□□□□□ -0.63
CARMIL3-202ENST00000559694 AIPL1Q9NZN9 384 aa11.09□□□□□ -0.63
CARMIL3-202ENST00000559694 INTUQ9ULD6 942 aa11.09□□□□□ -0.63
CARMIL3-202ENST00000559694 SCN7AQ01118 1682 aa11.09□□□□□ -0.63
CARMIL3-202ENST00000559694 LAMB2P55268 1798 aa11.09□□□□□ -0.63
CARMIL3-202ENST00000559694 A0A0U1RQJ8 604 aa11.09□□□□□ -0.63
CARMIL3-202ENST00000559694 PPP1R12AO14974 1030 aaPredicted RBP11.09□□□□□ -0.63
CARMIL3-202ENST00000559694 RAD51CO43502 376 aa11.09□□□□□ -0.63
CARMIL3-202ENST00000559694 MAP3K6O95382 1288 aa11.09□□□□□ -0.63
CARMIL3-202ENST00000559694 ST8SIA6P61647 398 aa11.09□□□□□ -0.63
CARMIL3-202ENST00000559694 CRYMQ14894 314 aa11.09□□□□□ -0.63
CARMIL3-202ENST00000559694 CENPUQ71F23 418 aa11.09□□□□□ -0.63
CARMIL3-202ENST00000559694 DDX53Q86TM3 631 aaKnown RBP11.09□□□□□ -0.63
CARMIL3-202ENST00000559694 CDKL3Q8IVW4 592 aaPredicted RBP11.09□□□□□ -0.63
CARMIL3-202ENST00000559694 FAM172AQ8WUF8 416 aa11.09□□□□□ -0.63
CARMIL3-202ENST00000559694 ATXN3LQ9H3M9 355 aa11.09□□□□□ -0.63
CARMIL3-202ENST00000559694 NOD2Q9HC29 1040 aa11.09□□□□□ -0.63
CARMIL3-202ENST00000559694 OSGEPQ9NPF4 335 aa11.09□□□□□ -0.63
CARMIL3-202ENST00000559694 TUBGCP4Q9UGJ1 667 aa11.09□□□□□ -0.63
CARMIL3-202ENST00000559694 MICAL2O94851 1124 aa11.09□□□□□ -0.63
CARMIL3-202ENST00000559694 LSM8O95777 96 aaKnown RBP11.09□□□□□ -0.63
CARMIL3-202ENST00000559694 F9P00740 461 aa11.09□□□□□ -0.63
CARMIL3-202ENST00000559694 SLC2A3P11169 496 aa11.09□□□□□ -0.63
CARMIL3-202ENST00000559694 MX2P20592 715 aa11.09□□□□□ -0.63
CARMIL3-202ENST00000559694 RAD23BP54727 409 aa11.09□□□□□ -0.63
CARMIL3-202ENST00000559694 GJA9P57773 515 aa11.09□□□□□ -0.63
CARMIL3-202ENST00000559694 BYSLQ13895 437 aaKnown RBP11.09□□□□□ -0.63
CARMIL3-202ENST00000559694 TMEM63BQ5T3F8 832 aa11.09□□□□□ -0.63
CARMIL3-202ENST00000559694 RAPH1Q70E73 1250 aa11.09□□□□□ -0.63
CARMIL3-202ENST00000559694 ATP6V0D2Q8N8Y2 350 aa11.09□□□□□ -0.63
CARMIL3-202ENST00000559694 RMDN1Q96DB5 314 aa11.09□□□□□ -0.63
CARMIL3-202ENST00000559694 ASIC4Q96FT7 647 aa11.09□□□□□ -0.63
CARMIL3-202ENST00000559694 CFAP36Q96G28 342 aa11.09□□□□□ -0.63
CARMIL3-202ENST00000559694 SCYL1Q96KG9 808 aa11.09□□□□□ -0.63
CARMIL3-202ENST00000559694 MFSD14AQ96MC6 490 aa11.09□□□□□ -0.63
CARMIL3-202ENST00000559694 XPO6Q96QU8 1125 aaKnown RBP11.09□□□□□ -0.63
CARMIL3-202ENST00000559694 CNMDO75829 334 aa11.08□□□□□ -0.64
CARMIL3-202ENST00000559694 FBXO21O94952 628 aa11.08□□□□□ -0.64
CARMIL3-202ENST00000559694 PAEPP09466 180 aa11.08□□□□□ -0.64
CARMIL3-202ENST00000559694 CHN1P15882 459 aa11.08□□□□□ -0.64
CARMIL3-202ENST00000559694 YWHAQP27348 245 aa11.08□□□□□ -0.64
CARMIL3-202ENST00000559694 PPIGQ13427 754 aaKnown RBP eCLIP11.08□□□□□ -0.64
CARMIL3-202ENST00000559694 USP41Q3LFD5 358 aa11.08□□□□□ -0.64
CARMIL3-202ENST00000559694 HP1BP3Q5SSJ5 553 aaPredicted RBP11.08□□□□□ -0.64
CARMIL3-202ENST00000559694 MAMDC4Q6UXC1 1216 aa11.08□□□□□ -0.64
CARMIL3-202ENST00000559694 ST6GALNAC4Q9H4F1 302 aa11.08□□□□□ -0.64
CARMIL3-202ENST00000559694 GPATCH2LQ9NWQ4 482 aa11.08□□□□□ -0.64
CARMIL3-202ENST00000559694 MOSPD1Q9UJG1 213 aa11.08□□□□□ -0.64
CARMIL3-202ENST00000559694 CAPN6Q9Y6Q1 641 aa11.08□□□□□ -0.64
CARMIL3-202ENST00000559694 KCNN4O15554 427 aa11.08□□□□□ -0.64
CARMIL3-202ENST00000559694 EFCAB14O75071 495 aa11.08□□□□□ -0.64
CARMIL3-202ENST00000559694 CA4P22748 312 aa11.08□□□□□ -0.64
CARMIL3-202ENST00000559694 CHRNA3P32297 505 aa11.08□□□□□ -0.64
CARMIL3-202ENST00000559694 AARSP49588 968 aaKnown RBP eCLIP11.08□□□□□ -0.64
CARMIL3-202ENST00000559694 YWHAZP63104 245 aaKnown RBP11.08□□□□□ -0.64
CARMIL3-202ENST00000559694 CLEC16AQ2KHT3 1053 aa11.08□□□□□ -0.64
CARMIL3-202ENST00000559694 SYCP2LQ5T4T6 812 aa11.08□□□□□ -0.64
CARMIL3-202ENST00000559694 LRIG3Q6UXM1 1119 aa11.08□□□□□ -0.64
CARMIL3-202ENST00000559694 NOP9Q86U38 636 aaKnown RBP11.08□□□□□ -0.64
CARMIL3-202ENST00000559694 ITIH5Q86UX2 942 aa11.08□□□□□ -0.64
CARMIL3-202ENST00000559694 C12orf56Q8IXR9 622 aa11.08□□□□□ -0.64
CARMIL3-202ENST00000559694 RNF168Q8IYW5 571 aaPredicted RBP11.08□□□□□ -0.64
CARMIL3-202ENST00000559694 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP11.08□□□□□ -0.64
CARMIL3-202ENST00000559694 UROC1Q96N76 676 aa11.08□□□□□ -0.64
CARMIL3-202ENST00000559694 FBXO44Q9H4M3 255 aa11.08□□□□□ -0.64
CARMIL3-202ENST00000559694 SMYD2Q9NRG4 433 aa11.08□□□□□ -0.64
CARMIL3-202ENST00000559694 SIK3Q9Y2K2 1263 aa11.08□□□□□ -0.64
CARMIL3-202ENST00000559694 CCT8L1PA6NM43 557 aa11.08□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms