RNA–Protein interactions for RNA: ENST00000559401.1

SNX1-207, Transcript of sorting nexin 1, humanhuman

TSL 2

Gene SNX1, Length 408 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-207ENST00000559401 CYP26A1O43174 497 aa8.65□□□□□ -1.02
SNX1-207ENST00000559401 GFRA3O60609 400 aa8.65□□□□□ -1.02
SNX1-207ENST00000559401 NFATC1O95644 943 aa8.65□□□□□ -1.02
SNX1-207ENST00000559401 OAS1P00973 400 aaKnown RBP8.65□□□□□ -1.02
SNX1-207ENST00000559401 AFPP02771 609 aaKnown RBP8.65□□□□□ -1.02
SNX1-207ENST00000559401 SP9P0CG40 484 aa8.65□□□□□ -1.02
SNX1-207ENST00000559401 IRF1P10914 325 aa8.65□□□□□ -1.02
SNX1-207ENST00000559401 RAD23BP54727 409 aa8.65□□□□□ -1.02
SNX1-207ENST00000559401 MLLT6P55198 1093 aaPredicted RBP8.65□□□□□ -1.02
SNX1-207ENST00000559401 KCNH2Q12809 1159 aa8.65□□□□□ -1.02
SNX1-207ENST00000559401 MTAPQ13126 283 aa8.65□□□□□ -1.02
SNX1-207ENST00000559401 NR1H3Q13133 447 aa8.65□□□□□ -1.02
SNX1-207ENST00000559401 PPP2R5DQ14738 602 aa8.65□□□□□ -1.02
SNX1-207ENST00000559401 GOLGA7BQ2TAP0 167 aa8.65□□□□□ -1.02
SNX1-207ENST00000559401 SGO2Q562F6 1265 aa8.65□□□□□ -1.02
SNX1-207ENST00000559401 DGKKQ5KSL6 1271 aa8.65□□□□□ -1.02
SNX1-207ENST00000559401 TSSK4Q6SA08 328 aa8.65□□□□□ -1.02
SNX1-207ENST00000559401 GPRIN1Q7Z2K8 1008 aa8.65□□□□□ -1.02
SNX1-207ENST00000559401 DDX42Q86XP3 938 aaKnown RBP eCLIP8.65□□□□□ -1.02
SNX1-207ENST00000559401 TRIM59Q8IWR1 403 aa8.65□□□□□ -1.02
SNX1-207ENST00000559401 SLC4A11Q8NBS3 891 aa8.65□□□□□ -1.02
SNX1-207ENST00000559401 NKD2Q969F2 451 aaPredicted RBP8.65□□□□□ -1.02
SNX1-207ENST00000559401 EXOC4Q96A65 974 aa8.65□□□□□ -1.02
SNX1-207ENST00000559401 FAXDC2Q96IV6 333 aa8.65□□□□□ -1.02
SNX1-207ENST00000559401 CNOT6LQ96LI5 555 aaKnown RBP8.65□□□□□ -1.02
SNX1-207ENST00000559401 RNF38Q9H0F5 515 aa8.65□□□□□ -1.02
SNX1-207ENST00000559401 CHRDQ9H2X0 955 aa8.65□□□□□ -1.02
SNX1-207ENST00000559401 ECT2Q9H8V3 914 aa8.65□□□□□ -1.02
SNX1-207ENST00000559401 CSNK1G1Q9HCP0 422 aa8.65□□□□□ -1.02
SNX1-207ENST00000559401 COMMD8Q9NX08 183 aa8.65□□□□□ -1.02
SNX1-207ENST00000559401 HESX1Q9UBX0 185 aa8.65□□□□□ -1.02
SNX1-207ENST00000559401 RWDD2AQ9UIY3 292 aa8.65□□□□□ -1.02
SNX1-207ENST00000559401 SH3BP1Q9Y3L3 701 aa8.65□□□□□ -1.02
SNX1-207ENST00000559401 PCDHB4Q9Y5E5 795 aa8.65□□□□□ -1.02
SNX1-207ENST00000559401 F5P12259 2224 aa8.64□□□□□ -1.03
SNX1-207ENST00000559401 OTOL1A6NHN0 477 aaPredicted RBP8.64□□□□□ -1.03
SNX1-207ENST00000559401 SLC9A3R1O14745 358 aaPredicted RBP8.64□□□□□ -1.03
SNX1-207ENST00000559401 P4HA2O15460 535 aa8.64□□□□□ -1.03
SNX1-207ENST00000559401 COCHO43405 550 aa8.64□□□□□ -1.03
SNX1-207ENST00000559401 TLR5O60602 858 aa8.64□□□□□ -1.03
SNX1-207ENST00000559401 OLFM2O95897 454 aa8.64□□□□□ -1.03
SNX1-207ENST00000559401 CHRNB1P11230 501 aa8.64□□□□□ -1.03
SNX1-207ENST00000559401 TCF3P15923 654 aa8.64□□□□□ -1.03
SNX1-207ENST00000559401 GJA4P35212 333 aa8.64□□□□□ -1.03
SNX1-207ENST00000559401 NBL1P41271 181 aa8.64□□□□□ -1.03
SNX1-207ENST00000559401 MTIF2P46199 727 aaKnown RBP8.64□□□□□ -1.03
SNX1-207ENST00000559401 CCR3P51677 355 aa8.64□□□□□ -1.03
SNX1-207ENST00000559401 MCCD1P59942 119 aaPredicted RBP8.64□□□□□ -1.03
SNX1-207ENST00000559401 SLC7A9P82251 487 aa8.64□□□□□ -1.03
SNX1-207ENST00000559401 GOLGA8FQ08AF8 430 aa8.64□□□□□ -1.03
SNX1-207ENST00000559401 GOLGA8DPQ0D2H9 430 aa8.64□□□□□ -1.03
SNX1-207ENST00000559401 GRSF1Q12849 480 aaKnown RBP eCLIP8.64□□□□□ -1.03
SNX1-207ENST00000559401 FZD5Q13467 585 aa8.64□□□□□ -1.03
SNX1-207ENST00000559401 EML3Q32P44 896 aa8.64□□□□□ -1.03
SNX1-207ENST00000559401 FOXR2Q6PJQ5 311 aa8.64□□□□□ -1.03
SNX1-207ENST00000559401 TMEM270Q6UE05 265 aa8.64□□□□□ -1.03
SNX1-207ENST00000559401 Q6ZS52 159 aa8.64□□□□□ -1.03
SNX1-207ENST00000559401 RRAGAQ7L523 313 aa8.64□□□□□ -1.03
SNX1-207ENST00000559401 MLKLQ8NB16 471 aa8.64□□□□□ -1.03
SNX1-207ENST00000559401 P2RY13Q9BPV8 354 aa8.64□□□□□ -1.03
SNX1-207ENST00000559401 IER2Q9BTL4 223 aa8.64□□□□□ -1.03
SNX1-207ENST00000559401 DUSP16Q9BY84 665 aa8.64□□□□□ -1.03
SNX1-207ENST00000559401 INTS2Q9H0H0 1204 aaKnown RBP8.64□□□□□ -1.03
SNX1-207ENST00000559401 LINC00597Q9H2U6 94 aa8.64□□□□□ -1.03
SNX1-207ENST00000559401 FAM124BQ9H5Z6 455 aaPredicted RBP8.64□□□□□ -1.03
SNX1-207ENST00000559401 PNPLA8Q9NP80 782 aa8.64□□□□□ -1.03
SNX1-207ENST00000559401 DACH1Q9UI36 760 aa8.64□□□□□ -1.03
SNX1-207ENST00000559401 NAGPAQ9UK23 515 aa8.64□□□□□ -1.03
SNX1-207ENST00000559401 TSPAN16Q9UKR8 245 aa8.64□□□□□ -1.03
SNX1-207ENST00000559401 FBXO4Q9UKT5 387 aa8.64□□□□□ -1.03
SNX1-207ENST00000559401 CACNA1HO95180 2353 aa8.64□□□□□ -1.03
SNX1-207ENST00000559401 CACNA1IQ9P0X4 2223 aa8.64□□□□□ -1.03
SNX1-207ENST00000559401 A0A1W2PQH9 124 aa8.63□□□□□ -1.03
SNX1-207ENST00000559401 HHLA1C9JL84 531 aa8.63□□□□□ -1.03
SNX1-207ENST00000559401 PES1O00541 588 aaKnown RBP8.63□□□□□ -1.03
SNX1-207ENST00000559401 CYP17A1P05093 508 aa8.63□□□□□ -1.03
SNX1-207ENST00000559401 VDRP11473 427 aa8.63□□□□□ -1.03
SNX1-207ENST00000559401 RARGP13631 454 aa8.63□□□□□ -1.03
SNX1-207ENST00000559401 KRT5P13647 590 aa8.63□□□□□ -1.03
SNX1-207ENST00000559401 ATP5C1P36542 298 aaKnown RBP8.63□□□□□ -1.03
SNX1-207ENST00000559401 CXCL12P48061 93 aa8.63□□□□□ -1.03
SNX1-207ENST00000559401 TUBP50607 506 aa8.63□□□□□ -1.03
SNX1-207ENST00000559401 KIF11P52732 1056 aa8.63□□□□□ -1.03
SNX1-207ENST00000559401 BCAT1P54687 386 aa8.63□□□□□ -1.03
SNX1-207ENST00000559401 MARSP56192 900 aaKnown RBP8.63□□□□□ -1.03
SNX1-207ENST00000559401 ZXDBP98169 803 aa8.63□□□□□ -1.03
SNX1-207ENST00000559401 DPCR1Q3MIW9 517 aa8.63□□□□□ -1.03
SNX1-207ENST00000559401 HSP90AA4PQ58FG1 418 aa8.63□□□□□ -1.03
SNX1-207ENST00000559401 C10orf120Q5SQS8 335 aa8.63□□□□□ -1.03
SNX1-207ENST00000559401 ARHGAP17Q68EM7 881 aa8.63□□□□□ -1.03
SNX1-207ENST00000559401 NAIF1Q69YI7 327 aaPredicted RBP8.63□□□□□ -1.03
SNX1-207ENST00000559401 RSRC2Q7L4I2 434 aaKnown RBP8.63□□□□□ -1.03
SNX1-207ENST00000559401 PIGZQ86VD9 579 aa8.63□□□□□ -1.03
SNX1-207ENST00000559401 ARHGEF19Q8IW93 802 aa8.63□□□□□ -1.03
SNX1-207ENST00000559401 FAM114A1Q8IWE2 563 aa8.63□□□□□ -1.03
SNX1-207ENST00000559401 MAML2Q8IZL2 1156 aaPredicted RBP8.63□□□□□ -1.03
SNX1-207ENST00000559401 ZNF687Q8N1G0 1237 aa8.63□□□□□ -1.03
SNX1-207ENST00000559401 SIX6OS1Q8N1H7 587 aa8.63□□□□□ -1.03
SNX1-207ENST00000559401 SPEM1Q8N4L4 309 aa8.63□□□□□ -1.03
SNX1-207ENST00000559401 ANKRD52Q8NB46 1076 aa8.63□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms