RNA–Protein interactions for RNA: ENST00000559347.1

SPG11-216, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 5

Gene SPG11, Length 716 nt, Biotype processed transcript, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-216ENST00000559347 HHLA1C9JL84 531 aa11.58□□□□□ -0.56
SPG11-216ENST00000559347 PMM2O15305 246 aa11.58□□□□□ -0.56
SPG11-216ENST00000559347 LAMTOR5O43504 91 aa11.58□□□□□ -0.56
SPG11-216ENST00000559347 ABL1P00519 1130 aa11.58□□□□□ -0.56
SPG11-216ENST00000559347 ZDHHC11BP0C7U3 371 aa11.58□□□□□ -0.56
SPG11-216ENST00000559347 SP9P0CG40 484 aa11.58□□□□□ -0.56
SPG11-216ENST00000559347 CHRNB1P11230 501 aa11.58□□□□□ -0.56
SPG11-216ENST00000559347 IFNAR2P48551 515 aa11.58□□□□□ -0.56
SPG11-216ENST00000559347 TUBP50607 506 aa11.58□□□□□ -0.56
SPG11-216ENST00000559347 RAD23BP54727 409 aa11.58□□□□□ -0.56
SPG11-216ENST00000559347 CUL2Q13617 745 aa11.58□□□□□ -0.56
SPG11-216ENST00000559347 PON2Q15165 354 aa11.58□□□□□ -0.56
SPG11-216ENST00000559347 PDGFRLQ15198 375 aa11.58□□□□□ -0.56
SPG11-216ENST00000559347 EML3Q32P44 896 aa11.58□□□□□ -0.56
SPG11-216ENST00000559347 PPP1R26Q5T8A7 1209 aaPredicted RBP11.58□□□□□ -0.56
SPG11-216ENST00000559347 SNX30Q5VWJ9 437 aa11.58□□□□□ -0.56
SPG11-216ENST00000559347 CC2D1AQ6P1N0 951 aaPredicted RBP11.58□□□□□ -0.56
SPG11-216ENST00000559347 TRIM59Q8IWR1 403 aa11.58□□□□□ -0.56
SPG11-216ENST00000559347 UBR7Q8N806 425 aa11.58□□□□□ -0.56
SPG11-216ENST00000559347 TTC16Q8NEE8 873 aa11.58□□□□□ -0.56
SPG11-216ENST00000559347 JAKMIP2Q96AA8 810 aa11.58□□□□□ -0.56
SPG11-216ENST00000559347 IER2Q9BTL4 223 aa11.58□□□□□ -0.56
SPG11-216ENST00000559347 DNAI2Q9GZS0 605 aa11.58□□□□□ -0.56
SPG11-216ENST00000559347 RNF38Q9H0F5 515 aa11.58□□□□□ -0.56
SPG11-216ENST00000559347 CLSTN2Q9H4D0 955 aa11.58□□□□□ -0.56
SPG11-216ENST00000559347 PNPLA8Q9NP80 782 aa11.58□□□□□ -0.56
SPG11-216ENST00000559347 GMIPQ9P107 970 aa11.58□□□□□ -0.56
SPG11-216ENST00000559347 FBXO4Q9UKT5 387 aa11.58□□□□□ -0.56
SPG11-216ENST00000559347 CPQQ9Y646 472 aa11.58□□□□□ -0.56
SPG11-216ENST00000559347 WNT6Q9Y6F9 365 aa11.58□□□□□ -0.56
SPG11-216ENST00000559347 LEFTY2O00292 366 aa11.57□□□□□ -0.56
SPG11-216ENST00000559347 CYP26A1O43174 497 aa11.57□□□□□ -0.56
SPG11-216ENST00000559347 COCHO43405 550 aa11.57□□□□□ -0.56
SPG11-216ENST00000559347 MTAPQ13126 283 aa11.57□□□□□ -0.56
SPG11-216ENST00000559347 CCINQ13939 588 aa11.57□□□□□ -0.56
SPG11-216ENST00000559347 LRRC32Q14392 662 aa11.57□□□□□ -0.56
SPG11-216ENST00000559347 GAS6Q14393 721 aa11.57□□□□□ -0.56
SPG11-216ENST00000559347 ZNF528Q3MIS6 628 aa11.57□□□□□ -0.56
SPG11-216ENST00000559347 CPA6Q8N4T0 437 aa11.57□□□□□ -0.56
SPG11-216ENST00000559347 ATP2A3Q93084 1043 aa11.57□□□□□ -0.56
SPG11-216ENST00000559347 TMEM176AQ96HP8 235 aa11.57□□□□□ -0.56
SPG11-216ENST00000559347 ZFRQ96KR1 1074 aaKnown RBP11.57□□□□□ -0.56
SPG11-216ENST00000559347 FBXO44Q9H4M3 255 aa11.57□□□□□ -0.56
SPG11-216ENST00000559347 CCSER2Q9H7U1 834 aa11.57□□□□□ -0.56
SPG11-216ENST00000559347 LMAN1LQ9HAT1 526 aa11.57□□□□□ -0.56
SPG11-216ENST00000559347 RBM12Q9NTZ6 932 aaKnown RBP11.57□□□□□ -0.56
SPG11-216ENST00000559347 DUS2Q9NX74 493 aaKnown RBP11.57□□□□□ -0.56
SPG11-216ENST00000559347 SMPD4Q9NXE4 827 aa11.57□□□□□ -0.56
SPG11-216ENST00000559347 RWDD2AQ9UIY3 292 aa11.57□□□□□ -0.56
SPG11-216ENST00000559347 ATG2BQ96BY7 2078 aa11.56□□□□□ -0.56
SPG11-216ENST00000559347 PRR23AA6NEV1 266 aa11.56□□□□□ -0.56
SPG11-216ENST00000559347 P4HA2O15460 535 aa11.56□□□□□ -0.56
SPG11-216ENST00000559347 NFATC1O95644 943 aa11.56□□□□□ -0.56
SPG11-216ENST00000559347 GNA14O95837 355 aa11.56□□□□□ -0.56
SPG11-216ENST00000559347 MBL2P11226 248 aaPredicted RBP11.56□□□□□ -0.56
SPG11-216ENST00000559347 TBXAS1P24557 533 aaPredicted RBP11.56□□□□□ -0.56
SPG11-216ENST00000559347 GJA4P35212 333 aa11.56□□□□□ -0.56
SPG11-216ENST00000559347 PGFP49763 221 aa11.56□□□□□ -0.56
SPG11-216ENST00000559347 YWHAEP62258 255 aaKnown RBP11.56□□□□□ -0.56
SPG11-216ENST00000559347 LRMPQ12912 555 aa11.56□□□□□ -0.56
SPG11-216ENST00000559347 TMEM196Q5HYL7 178 aa11.56□□□□□ -0.56
SPG11-216ENST00000559347 HECTD3Q5T447 861 aa11.56□□□□□ -0.56
SPG11-216ENST00000559347 ARHGAP17Q68EM7 881 aa11.56□□□□□ -0.56
SPG11-216ENST00000559347 Q6ZS52 159 aa11.56□□□□□ -0.56
SPG11-216ENST00000559347 DDX42Q86XP3 938 aaKnown RBP eCLIP11.56□□□□□ -0.56
SPG11-216ENST00000559347 KIAA1958Q8N8K9 716 aa11.56□□□□□ -0.56
SPG11-216ENST00000559347 LMO3Q8TAP4 145 aa11.56□□□□□ -0.56
SPG11-216ENST00000559347 MED15Q96RN5 788 aa11.56□□□□□ -0.56
SPG11-216ENST00000559347 SRRTQ9BXP5 876 aaKnown RBP11.56□□□□□ -0.56
SPG11-216ENST00000559347 DUSP16Q9BY84 665 aa11.56□□□□□ -0.56
SPG11-216ENST00000559347 ECT2Q9H8V3 914 aa11.56□□□□□ -0.56
SPG11-216ENST00000559347 R4GN57 208 aa11.56□□□□□ -0.56
SPG11-216ENST00000559347 TRDMT1O14717 391 aaKnown RBP11.55□□□□□ -0.56
SPG11-216ENST00000559347 TLR5O60602 858 aa11.55□□□□□ -0.56
SPG11-216ENST00000559347 GFRA3O60609 400 aa11.55□□□□□ -0.56
SPG11-216ENST00000559347 AFPP02771 609 aaKnown RBP11.55□□□□□ -0.56
SPG11-216ENST00000559347 CCDC192P0DO97 292 aa11.55□□□□□ -0.56
SPG11-216ENST00000559347 TDGF1P13385 188 aa11.55□□□□□ -0.56
SPG11-216ENST00000559347 ACO1P21399 889 aaKnown RBP11.55□□□□□ -0.56
SPG11-216ENST00000559347 KIF11P52732 1056 aa11.55□□□□□ -0.56
SPG11-216ENST00000559347 KCNH2Q12809 1159 aa11.55□□□□□ -0.56
SPG11-216ENST00000559347 GOLGA7BQ2TAP0 167 aa11.55□□□□□ -0.56
SPG11-216ENST00000559347 DGKKQ5KSL6 1271 aa11.55□□□□□ -0.56
SPG11-216ENST00000559347 NAIF1Q69YI7 327 aaPredicted RBP11.55□□□□□ -0.56
SPG11-216ENST00000559347 FSTL4Q6MZW2 842 aa11.55□□□□□ -0.56
SPG11-216ENST00000559347 ZC3H14Q6PJT7 736 aaKnown RBP11.55□□□□□ -0.56
SPG11-216ENST00000559347 MAMSTRQ6ZN01 415 aa11.55□□□□□ -0.56
SPG11-216ENST00000559347 ASCL5Q7RTU5 278 aa11.55□□□□□ -0.56
SPG11-216ENST00000559347 CCDC186Q7Z3E2 898 aa11.55□□□□□ -0.56
SPG11-216ENST00000559347 TTC30AQ86WT1 665 aa11.55□□□□□ -0.56
SPG11-216ENST00000559347 PPM1KQ8N3J5 372 aa11.55□□□□□ -0.56
SPG11-216ENST00000559347 NELL1Q92832 810 aa11.55□□□□□ -0.56
SPG11-216ENST00000559347 CNOT6LQ96LI5 555 aaKnown RBP11.55□□□□□ -0.56
SPG11-216ENST00000559347 HEXIM2Q96MH2 286 aaKnown RBP11.55□□□□□ -0.56
SPG11-216ENST00000559347 NT5C1BQ96P26 610 aa11.55□□□□□ -0.56
SPG11-216ENST00000559347 NUP62CLQ9H1M0 184 aa11.55□□□□□ -0.56
SPG11-216ENST00000559347 RTN4Q9NQC3 1192 aaKnown RBP11.55□□□□□ -0.56
SPG11-216ENST00000559347 CYLDQ9NQC7 956 aa11.55□□□□□ -0.56
SPG11-216ENST00000559347 TLR8Q9NR97 1041 aaKnown RBP11.55□□□□□ -0.56
SPG11-216ENST00000559347 LMBRD1Q9NUN5 540 aa11.55□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms