RNA–Protein interactions for RNA: ENST00000559192.5

USP3-210, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 1 (best)

Gene USP3, Length 5,499 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-210ENST00000559192 PGM3O95394 542 aa7.38□□□□□ -1.23
USP3-210ENST00000559192 APBA3O96018 575 aa7.38□□□□□ -1.23
USP3-210ENST00000559192 ECHS1P30084 290 aa7.38□□□□□ -1.23
USP3-210ENST00000559192 SKIV2L2P42285 1042 aaKnown RBP7.38□□□□□ -1.23
USP3-210ENST00000559192 NLRP11P59045 1033 aaKnown RBP7.38□□□□□ -1.23
USP3-210ENST00000559192 PDAP1Q13442 181 aaKnown RBP7.38□□□□□ -1.23
USP3-210ENST00000559192 MAMLD1Q13495 774 aa7.38□□□□□ -1.23
USP3-210ENST00000559192 BAATQ14032 418 aaPredicted RBP7.38□□□□□ -1.23
USP3-210ENST00000559192 SIX6OS1Q8N1H7 587 aa7.38□□□□□ -1.23
USP3-210ENST00000559192 NLGN1Q8N2Q7 840 aa7.38□□□□□ -1.23
USP3-210ENST00000559192 CAB39Q9Y376 341 aaPredicted RBP7.38□□□□□ -1.23
USP3-210ENST00000559192 ACTL7BQ9Y614 415 aa7.38□□□□□ -1.23
USP3-210ENST00000559192 FSCN2O14926 492 aa7.37□□□□□ -1.23
USP3-210ENST00000559192 PRKCBP05771 671 aa7.37□□□□□ -1.23
USP3-210ENST00000559192 GPD1P21695 349 aa7.37□□□□□ -1.23
USP3-210ENST00000559192 GLRA2P23416 452 aa7.37□□□□□ -1.23
USP3-210ENST00000559192 FOXN2P32314 431 aa7.37□□□□□ -1.23
USP3-210ENST00000559192 SLC1A6P48664 564 aa7.37□□□□□ -1.23
USP3-210ENST00000559192 UBE3AQ05086 875 aa7.37□□□□□ -1.23
USP3-210ENST00000559192 MTMR2Q13614 643 aa7.37□□□□□ -1.23
USP3-210ENST00000559192 TNFAIP1Q13829 316 aa7.37□□□□□ -1.23
USP3-210ENST00000559192 R3HDM1Q15032 1099 aaKnown RBP7.37□□□□□ -1.23
USP3-210ENST00000559192 SGSM1Q2NKQ1 1148 aa7.37□□□□□ -1.23
USP3-210ENST00000559192 KHDC1Q4VXA5 237 aaKnown RBP7.37□□□□□ -1.23
USP3-210ENST00000559192 CEP78Q5JTW2 689 aa7.37□□□□□ -1.23
USP3-210ENST00000559192 ARMC3Q5W041 872 aa7.37□□□□□ -1.23
USP3-210ENST00000559192 NPNTQ6UXI9 565 aa7.37□□□□□ -1.23
USP3-210ENST00000559192 PID1Q7Z2X4 250 aa7.37□□□□□ -1.23
USP3-210ENST00000559192 KATNAL2Q8IYT4 538 aa7.37□□□□□ -1.23
USP3-210ENST00000559192 KCTD17Q8N5Z5 321 aa7.37□□□□□ -1.23
USP3-210ENST00000559192 ALLCQ8N6M5 410 aa7.37□□□□□ -1.23
USP3-210ENST00000559192 ZFYVE19Q96K21 471 aa7.37□□□□□ -1.23
USP3-210ENST00000559192 ECSITQ9BQ95 431 aa7.37□□□□□ -1.23
USP3-210ENST00000559192 GRIP2Q9C0E4 1043 aa7.37□□□□□ -1.23
USP3-210ENST00000559192 IL1RL2Q9HB29 575 aa7.37□□□□□ -1.23
USP3-210ENST00000559192 MRGBPQ9NV56 204 aa7.37□□□□□ -1.23
USP3-210ENST00000559192 CDYLQ9Y232 598 aa7.37□□□□□ -1.23
USP3-210ENST00000559192 CHKBQ9Y259 395 aa7.37□□□□□ -1.23
USP3-210ENST00000559192 CYP3A7-CYP3A51PA0A087WV96 503 aa7.37□□□□□ -1.23
USP3-210ENST00000559192 NFIBO00712 420 aa7.37□□□□□ -1.23
USP3-210ENST00000559192 FKBP6O75344 327 aa7.37□□□□□ -1.23
USP3-210ENST00000559192 WDR47O94967 919 aa7.37□□□□□ -1.23
USP3-210ENST00000559192 MMP10P09238 476 aa7.37□□□□□ -1.23
USP3-210ENST00000559192 IL1R1P14778 569 aa7.37□□□□□ -1.23
USP3-210ENST00000559192 CYP3A7P24462 503 aa7.37□□□□□ -1.23
USP3-210ENST00000559192 RHBDL3P58872 404 aa7.37□□□□□ -1.23
USP3-210ENST00000559192 BMT2Q1RMZ1 405 aa7.37□□□□□ -1.23
USP3-210ENST00000559192 RAB44Q7Z6P3 723 aaPredicted RBP7.37□□□□□ -1.23
USP3-210ENST00000559192 HEATR4Q86WZ0 1026 aa7.37□□□□□ -1.23
USP3-210ENST00000559192 HORMAD1Q86X24 394 aa7.37□□□□□ -1.23
USP3-210ENST00000559192 RNF148Q8N7C7 305 aa7.37□□□□□ -1.23
USP3-210ENST00000559192 ASAP3Q8TDY4 903 aa7.37□□□□□ -1.23
USP3-210ENST00000559192 SH3TC2Q8TF17 1288 aa7.37□□□□□ -1.23
USP3-210ENST00000559192 TRIM8Q9BZR9 551 aa7.37□□□□□ -1.23
USP3-210ENST00000559192 NIF3L1Q9GZT8 377 aa7.37□□□□□ -1.23
USP3-210ENST00000559192 AGO4Q9HCK5 861 aaKnown RBP7.37□□□□□ -1.23
USP3-210ENST00000559192 SESN1Q9Y6P5 492 aa7.37□□□□□ -1.23
USP3-210ENST00000559192 RPS6P62753 249 aaKnown RBP7.37□□□□□ -1.23
USP3-210ENST00000559192 STXBP2Q15833 593 aa7.37□□□□□ -1.23
USP3-210ENST00000559192 KBTBD12Q3ZCT8 623 aa7.37□□□□□ -1.23
USP3-210ENST00000559192 GMCL1P1Q8NEA9 526 aa7.37□□□□□ -1.23
USP3-210ENST00000559192 DDHD1Q8NEL9 900 aa7.37□□□□□ -1.23
USP3-210ENST00000559192 ST13P5Q8NFI4 369 aaPredicted RBP7.37□□□□□ -1.23
USP3-210ENST00000559192 FNDC3AQ9Y2H6 1198 aaKnown RBP7.37□□□□□ -1.23
USP3-210ENST00000559192 SETD1AO15047 1707 aaKnown RBP7.37□□□□□ -1.23
USP3-210ENST00000559192 H0Y626 953 aa7.37□□□□□ -1.23
USP3-210ENST00000559192 SOCS7O14512 581 aa7.37□□□□□ -1.23
USP3-210ENST00000559192 PROCP04070 461 aa7.37□□□□□ -1.23
USP3-210ENST00000559192 YWHAHQ04917 246 aaPredicted RBP7.37□□□□□ -1.23
USP3-210ENST00000559192 MCL1Q07820 350 aa7.37□□□□□ -1.23
USP3-210ENST00000559192 N4BP2L1Q5TBK1 243 aaPredicted RBP7.37□□□□□ -1.23
USP3-210ENST00000559192 C16orf46Q6P387 395 aa7.37□□□□□ -1.23
USP3-210ENST00000559192 FOXR2Q6PJQ5 311 aa7.37□□□□□ -1.23
USP3-210ENST00000559192 CLNKQ7Z7G1 428 aa7.37□□□□□ -1.23
USP3-210ENST00000559192 TMC2Q8TDI7 906 aa7.37□□□□□ -1.23
USP3-210ENST00000559192 SEMA4DQ92854 862 aa7.37□□□□□ -1.23
USP3-210ENST00000559192 KREMEN1Q96MU8 473 aa7.37□□□□□ -1.23
USP3-210ENST00000559192 FAM192AQ9GZU8 254 aa7.37□□□□□ -1.23
USP3-210ENST00000559192 CCDC134Q9H6E4 229 aa7.37□□□□□ -1.23
USP3-210ENST00000559192 LRRC4Q9HBW1 653 aa7.37□□□□□ -1.23
USP3-210ENST00000559192 FBXO40Q9UH90 709 aa7.37□□□□□ -1.23
USP3-210ENST00000559192 GSC2O15499 205 aa7.36□□□□□ -1.23
USP3-210ENST00000559192 COL1A1P02452 1464 aaPredicted RBP7.36□□□□□ -1.23
USP3-210ENST00000559192 VIL1P09327 827 aaKnown RBP7.36□□□□□ -1.23
USP3-210ENST00000559192 RARRES1P49788 294 aa7.36□□□□□ -1.23
USP3-210ENST00000559192 ARHGDIAP52565 204 aa7.36□□□□□ -1.23
USP3-210ENST00000559192 UBAP2Q5T6F2 1119 aaKnown RBP7.36□□□□□ -1.23
USP3-210ENST00000559192 IL31Q6EBC2 164 aa7.36□□□□□ -1.23
USP3-210ENST00000559192 C4orf50Q6ZRC1 276 aa7.36□□□□□ -1.23
USP3-210ENST00000559192 NET1Q7Z628 596 aaPredicted RBP7.36□□□□□ -1.23
USP3-210ENST00000559192 CNTNAP4Q9C0A0 1308 aa7.36□□□□□ -1.23
USP3-210ENST00000559192 CLIC5Q9NZA1 410 aa7.36□□□□□ -1.23
USP3-210ENST00000559192 PCDHA2Q9Y5H9 948 aa7.36□□□□□ -1.23
USP3-210ENST00000559192 PCDHAC2Q9Y5I4 1007 aa7.36□□□□□ -1.23
USP3-210ENST00000559192 AVILO75366 819 aa7.36□□□□□ -1.23
USP3-210ENST00000559192 ABHD2P08910 425 aa7.36□□□□□ -1.23
USP3-210ENST00000559192 SULT1E1P49888 294 aa7.36□□□□□ -1.23
USP3-210ENST00000559192 KPNA2P52292 529 aaKnown RBP7.36□□□□□ -1.23
USP3-210ENST00000559192 ZC3H12BQ5HYM0 836 aaKnown RBP7.36□□□□□ -1.23
USP3-210ENST00000559192 LPCAT4Q643R3 524 aa7.36□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 64.5 ms