RNA–Protein interactions for RNA: ENST00000559175.1

CTDSPL2-206, Transcript of CTD small phosphatase like 2, humanhuman

TSL 2

Gene CTDSPL2, Length 3,609 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL2-206ENST00000559175 HTR3BO95264 441 aa6.06□□□□□ -1.44
CTDSPL2-206ENST00000559175 GGPS1O95749 300 aa6.06□□□□□ -1.44
CTDSPL2-206ENST00000559175 PRR35P0CG20 571 aa6.06□□□□□ -1.44
CTDSPL2-206ENST00000559175 DHPSP49366 369 aaPredicted RBP6.06□□□□□ -1.44
CTDSPL2-206ENST00000559175 MAP3K7CLP57077 242 aa6.06□□□□□ -1.44
CTDSPL2-206ENST00000559175 ARHGAP8P85298 464 aa6.06□□□□□ -1.44
CTDSPL2-206ENST00000559175 KRT17Q04695 432 aa6.06□□□□□ -1.44
CTDSPL2-206ENST00000559175 RPA4Q13156 261 aa6.06□□□□□ -1.44
CTDSPL2-206ENST00000559175 UBE3CQ15386 1083 aa6.06□□□□□ -1.44
CTDSPL2-206ENST00000559175 GLE1Q53GS7 698 aaKnown RBP6.06□□□□□ -1.44
CTDSPL2-206ENST00000559175 TOR2AQ5JU69 321 aa6.06□□□□□ -1.44
CTDSPL2-206ENST00000559175 DENND5AQ6IQ26 1287 aa6.06□□□□□ -1.44
CTDSPL2-206ENST00000559175 WDR93Q6P2C0 686 aa6.06□□□□□ -1.44
CTDSPL2-206ENST00000559175 KCNT2Q6UVM3 1135 aa6.06□□□□□ -1.44
CTDSPL2-206ENST00000559175 RRAGAQ7L523 313 aa6.06□□□□□ -1.44
CTDSPL2-206ENST00000559175 RAB11FIP2Q7L804 512 aa6.06□□□□□ -1.44
CTDSPL2-206ENST00000559175 NLRP9Q7RTR0 991 aa6.06□□□□□ -1.44
CTDSPL2-206ENST00000559175 RIOX2Q8IUF8 465 aa6.06□□□□□ -1.44
CTDSPL2-206ENST00000559175 NCSTNQ92542 709 aa6.06□□□□□ -1.44
CTDSPL2-206ENST00000559175 PRCCQ92733 491 aaPredicted RBP6.06□□□□□ -1.44
CTDSPL2-206ENST00000559175 FAM84AQ96KN4 292 aa6.06□□□□□ -1.44
CTDSPL2-206ENST00000559175 CDK5RAP1Q96SZ6 601 aaKnown RBP6.06□□□□□ -1.44
CTDSPL2-206ENST00000559175 EIF2AQ9BY44 585 aaKnown RBP6.06□□□□□ -1.44
CTDSPL2-206ENST00000559175 KCNF1Q9H3M0 494 aa6.06□□□□□ -1.44
CTDSPL2-206ENST00000559175 TAB2Q9NYJ8 693 aa6.06□□□□□ -1.44
CTDSPL2-206ENST00000559175 DSEQ9UL01 958 aa6.06□□□□□ -1.44
CTDSPL2-206ENST00000559175 GRID1Q9ULK0 1009 aa6.06□□□□□ -1.44
CTDSPL2-206ENST00000559175 CLCA2Q9UQC9 943 aa6.06□□□□□ -1.44
CTDSPL2-206ENST00000559175 NAALAD2Q9Y3Q0 740 aa6.06□□□□□ -1.44
CTDSPL2-206ENST00000559175 BACE2Q9Y5Z0 518 aa6.06□□□□□ -1.44
CTDSPL2-206ENST00000559175 CAPN7Q9Y6W3 813 aa6.06□□□□□ -1.44
CTDSPL2-206ENST00000559175 TRAV34A0A0B4J273 112 aa6.06□□□□□ -1.44
CTDSPL2-206ENST00000559175 H3BNC9 293 aa6.06□□□□□ -1.44
CTDSPL2-206ENST00000559175 NVLO15381 856 aaKnown RBP6.06□□□□□ -1.44
CTDSPL2-206ENST00000559175 NOL3O60936 208 aaKnown RBP6.06□□□□□ -1.44
CTDSPL2-206ENST00000559175 CKBP12277 381 aa6.06□□□□□ -1.44
CTDSPL2-206ENST00000559175 ARF4P18085 180 aaPredicted RBP6.06□□□□□ -1.44
CTDSPL2-206ENST00000559175 IL13P35225 146 aa6.06□□□□□ -1.44
CTDSPL2-206ENST00000559175 PITPNBP48739 271 aa6.06□□□□□ -1.44
CTDSPL2-206ENST00000559175 FDX2Q6P4F2 183 aa6.06□□□□□ -1.44
CTDSPL2-206ENST00000559175 CISD2Q8N5K1 135 aaKnown RBP6.06□□□□□ -1.44
CTDSPL2-206ENST00000559175 CACTINQ8WUQ7 758 aaKnown RBP6.06□□□□□ -1.44
CTDSPL2-206ENST00000559175 CDKL2Q92772 493 aa6.06□□□□□ -1.44
CTDSPL2-206ENST00000559175 C1GALT1C1Q96EU7 318 aa6.06□□□□□ -1.44
CTDSPL2-206ENST00000559175 FAM167AQ96KS9 214 aa6.06□□□□□ -1.44
CTDSPL2-206ENST00000559175 SENP6Q9GZR1 1112 aaPredicted RBP6.06□□□□□ -1.44
CTDSPL2-206ENST00000559175 QRSL1Q9H0R6 528 aaKnown RBP6.06□□□□□ -1.44
CTDSPL2-206ENST00000559175 LIN7BQ9HAP6 207 aa6.06□□□□□ -1.44
CTDSPL2-206ENST00000559175 NRIP3Q9NQ35 241 aa6.06□□□□□ -1.44
CTDSPL2-206ENST00000559175 A1CFQ9NQ94 594 aaKnown RBP6.06□□□□□ -1.44
CTDSPL2-206ENST00000559175 SEC31BQ9NQW1 1179 aa6.06□□□□□ -1.44
CTDSPL2-206ENST00000559175 WBP1LQ9NX94 342 aa6.06□□□□□ -1.44
CTDSPL2-206ENST00000559175 FBXL21Q9UKT6 434 aa6.06□□□□□ -1.44
CTDSPL2-206ENST00000559175 FLT4P35916 1363 aa6.06□□□□□ -1.44
CTDSPL2-206ENST00000559175 DDX60LQ5H9U9 1706 aaKnown RBP6.05□□□□□ -1.44
CTDSPL2-206ENST00000559175 CLRN2A0PK11 232 aa6.05□□□□□ -1.44
CTDSPL2-206ENST00000559175 LRRIQ4A6NIV6 560 aa6.05□□□□□ -1.44
CTDSPL2-206ENST00000559175 ALDH1A1P00352 501 aa6.05□□□□□ -1.44
CTDSPL2-206ENST00000559175 POLR2MP0CAP2 368 aa6.05□□□□□ -1.44
CTDSPL2-206ENST00000559175 ADD1P35611 737 aaKnown RBP6.05□□□□□ -1.44
CTDSPL2-206ENST00000559175 SERPINF1P36955 418 aa6.05□□□□□ -1.44
CTDSPL2-206ENST00000559175 CAMLGP49069 296 aa6.05□□□□□ -1.44
CTDSPL2-206ENST00000559175 EFTUD2Q15029 972 aaKnown RBP eCLIP6.05□□□□□ -1.44
CTDSPL2-206ENST00000559175 CWF19L1Q69YN2 538 aaKnown RBP6.05□□□□□ -1.44
CTDSPL2-206ENST00000559175 USP53Q70EK8 1073 aa6.05□□□□□ -1.44
CTDSPL2-206ENST00000559175 PTF1AQ7RTS3 328 aa6.05□□□□□ -1.44
CTDSPL2-206ENST00000559175 ZC3H7AQ8IWR0 971 aaKnown RBP6.05□□□□□ -1.44
CTDSPL2-206ENST00000559175 FAM20CQ8IXL6 584 aa6.05□□□□□ -1.44
CTDSPL2-206ENST00000559175 CELF5Q8N6W0 485 aaKnown RBP6.05□□□□□ -1.44
CTDSPL2-206ENST00000559175 PIP4K2CQ8TBX8 421 aa6.05□□□□□ -1.44
CTDSPL2-206ENST00000559175 OTUD7AQ8TE49 926 aaPredicted RBP6.05□□□□□ -1.44
CTDSPL2-206ENST00000559175 MAML3Q96JK9 1138 aa6.05□□□□□ -1.44
CTDSPL2-206ENST00000559175 IFT74Q96LB3 600 aa6.05□□□□□ -1.44
CTDSPL2-206ENST00000559175 CITED2Q99967 270 aaPredicted RBP6.05□□□□□ -1.44
CTDSPL2-206ENST00000559175 RIOK1Q9BRS2 568 aaKnown RBP6.05□□□□□ -1.44
CTDSPL2-206ENST00000559175 FAM107BQ9H098 131 aa6.05□□□□□ -1.44
CTDSPL2-206ENST00000559175 EPN3Q9H201 632 aa6.05□□□□□ -1.44
CTDSPL2-206ENST00000559175 PSTPIP2Q9H939 334 aa6.05□□□□□ -1.44
CTDSPL2-206ENST00000559175 PCDH18Q9HCL0 1135 aa6.05□□□□□ -1.44
CTDSPL2-206ENST00000559175 DCP1AQ9NPI6 582 aaPredicted RBP6.05□□□□□ -1.44
CTDSPL2-206ENST00000559175 FBXO40Q9UH90 709 aa6.05□□□□□ -1.44
CTDSPL2-206ENST00000559175 SALL4Q9UJQ4 1053 aa6.05□□□□□ -1.44
CTDSPL2-206ENST00000559175 C10orf71Q711Q0 1435 aa6.05□□□□□ -1.44
CTDSPL2-206ENST00000559175 PTPDC1A2A3K4 754 aa6.05□□□□□ -1.44
CTDSPL2-206ENST00000559175 GTPBP1O00178 669 aaKnown RBP6.05□□□□□ -1.44
CTDSPL2-206ENST00000559175 DLX3O60479 287 aa6.05□□□□□ -1.44
CTDSPL2-206ENST00000559175 CCDC192P0DO97 292 aa6.05□□□□□ -1.44
CTDSPL2-206ENST00000559175 NCF1P14598 390 aaPredicted RBP6.05□□□□□ -1.44
CTDSPL2-206ENST00000559175 CSF2RAP15509 400 aa6.05□□□□□ -1.44
CTDSPL2-206ENST00000559175 PRKACBP22694 351 aa6.05□□□□□ -1.44
CTDSPL2-206ENST00000559175 TXLNAP40222 546 aa6.05□□□□□ -1.44
CTDSPL2-206ENST00000559175 BUD31P41223 144 aaPredicted RBP6.05□□□□□ -1.44
CTDSPL2-206ENST00000559175 CPA2P48052 419 aa6.05□□□□□ -1.44
CTDSPL2-206ENST00000559175 HADHBP55084 474 aaKnown RBP6.05□□□□□ -1.44
CTDSPL2-206ENST00000559175 OXCT1P55809 520 aa6.05□□□□□ -1.44
CTDSPL2-206ENST00000559175 ACTR1AP61163 376 aa6.05□□□□□ -1.44
CTDSPL2-206ENST00000559175 SCRN1Q12765 414 aa6.05□□□□□ -1.44
CTDSPL2-206ENST00000559175 RAB3GAP1Q15042 981 aa6.05□□□□□ -1.44
CTDSPL2-206ENST00000559175 NTRK3Q16288 839 aa6.05□□□□□ -1.44
CTDSPL2-206ENST00000559175 CFAP157Q5JU67 520 aa6.05□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms