RNA–Protein interactions for RNA: ENST00000558964.5

NEO1-206, Transcript of neogenin 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NEO1, Length 4,441 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEO1-206ENST00000558964 DEFB106AQ8N104 65 aa17.11■□□□□ 0.33
NEO1-206ENST00000558964 CALML6Q8TD86 181 aa17.11■□□□□ 0.33
NEO1-206ENST00000558964 ARL8AQ96BM9 186 aa17.11■□□□□ 0.33
NEO1-206ENST00000558964 AKAP12Q02952 1782 aa17.11■□□□□ 0.33
NEO1-206ENST00000558964 IGKV6D-41A0A0C4DH26 115 aa17.11■□□□□ 0.33
NEO1-206ENST00000558964 RARGP13631 454 aa17.11■□□□□ 0.33
NEO1-206ENST00000558964 LSP1P33241 339 aa17.11■□□□□ 0.33
NEO1-206ENST00000558964 FDFT1P37268 417 aa17.11■□□□□ 0.33
NEO1-206ENST00000558964 MLH1P40692 756 aa17.11■□□□□ 0.33
NEO1-206ENST00000558964 FLT3LGP49771 235 aa17.11■□□□□ 0.33
NEO1-206ENST00000558964 BTG3Q14201 252 aaPredicted RBP17.11■□□□□ 0.33
NEO1-206ENST00000558964 ZACNQ401N2 412 aa17.11■□□□□ 0.33
NEO1-206ENST00000558964 ABHD15Q6UXT9 468 aa17.11■□□□□ 0.33
NEO1-206ENST00000558964 ACO2Q99798 780 aaKnown RBP17.11■□□□□ 0.33
NEO1-206ENST00000558964 RNPEPQ9H4A4 650 aa17.11■□□□□ 0.33
NEO1-206ENST00000558964 TMEM39AQ9NV64 488 aa17.11■□□□□ 0.33
NEO1-206ENST00000558964 STX7O15400 261 aaKnown RBP17.11■□□□□ 0.33
NEO1-206ENST00000558964 HMGCRP04035 888 aa17.11■□□□□ 0.33
NEO1-206ENST00000558964 IRF2BP1Q8IU81 584 aa17.11■□□□□ 0.33
NEO1-206ENST00000558964 FBXO36Q8NEA4 188 aa17.11■□□□□ 0.33
NEO1-206ENST00000558964 NPHS2Q9NP85 383 aa17.11■□□□□ 0.33
NEO1-206ENST00000558964 A0A0U1RQJ8 604 aa17.1■□□□□ 0.33
NEO1-206ENST00000558964 F8VP50 259 aa17.1■□□□□ 0.33
NEO1-206ENST00000558964 SGF29Q96ES7 293 aa17.1■□□□□ 0.33
NEO1-206ENST00000558964 TSPAN17Q96FV3 270 aa17.1■□□□□ 0.33
NEO1-206ENST00000558964 CELF6Q96J87 481 aaKnown RBP17.1■□□□□ 0.33
NEO1-206ENST00000558964 PPP1R2P1Q96PQ5 205 aa17.1■□□□□ 0.33
NEO1-206ENST00000558964 CINPQ9BW66 212 aaPredicted RBP17.1■□□□□ 0.33
NEO1-206ENST00000558964 AVENQ9NQS1 362 aaPredicted RBP17.1■□□□□ 0.33
NEO1-206ENST00000558964 CAMSAP3Q9P1Y5 1249 aaPredicted RBP17.1■□□□□ 0.33
NEO1-206ENST00000558964 PCDHB5Q9Y5E4 795 aa17.1■□□□□ 0.33
NEO1-206ENST00000558964 KRT4P19013 534 aa17.1■□□□□ 0.33
NEO1-206ENST00000558964 CYP2F1P24903 491 aa17.1■□□□□ 0.33
NEO1-206ENST00000558964 MAP2K2P36507 400 aa17.1■□□□□ 0.33
NEO1-206ENST00000558964 PPP1R3FQ6ZSY5 799 aaPredicted RBP17.1■□□□□ 0.33
NEO1-206ENST00000558964 EPN3Q9H201 632 aa17.1■□□□□ 0.33
NEO1-206ENST00000558964 UBP1Q9NZI7 540 aa17.1■□□□□ 0.33
NEO1-206ENST00000558964 ADA2Q9NZK5 511 aa17.1■□□□□ 0.33
NEO1-206ENST00000558964 ZNF197O14709 1029 aa17.1■□□□□ 0.33
NEO1-206ENST00000558964 CCDC22O60826 627 aa17.1■□□□□ 0.33
NEO1-206ENST00000558964 CCDC130P13994 396 aa17.1■□□□□ 0.33
NEO1-206ENST00000558964 LAMB3Q13751 1172 aa17.1■□□□□ 0.33
NEO1-206ENST00000558964 PTRHD1Q6GMV3 140 aaKnown RBP17.1■□□□□ 0.33
NEO1-206ENST00000558964 LVRNQ6Q4G3 990 aa17.1■□□□□ 0.33
NEO1-206ENST00000558964 CEP41Q9BYV8 373 aa17.1■□□□□ 0.33
NEO1-206ENST00000558964 GANQ9H2C0 597 aa17.1■□□□□ 0.33
NEO1-206ENST00000558964 BTBD7Q9P203 1132 aa17.1■□□□□ 0.33
NEO1-206ENST00000558964 NUDT5Q9UKK9 219 aa17.1■□□□□ 0.33
NEO1-206ENST00000558964 PCDHB8Q9UN66 801 aa17.1■□□□□ 0.33
NEO1-206ENST00000558964 ARL2BPQ9Y2Y0 163 aa17.1■□□□□ 0.33
NEO1-206ENST00000558964 L3MBTL1Q9Y468 752 aa17.1■□□□□ 0.33
NEO1-206ENST00000558964 DLG5Q8TDM6 1919 aa17.1■□□□□ 0.33
NEO1-206ENST00000558964 PJA2O43164 708 aa17.1■□□□□ 0.33
NEO1-206ENST00000558964 RARAP10276 462 aa17.1■□□□□ 0.33
NEO1-206ENST00000558964 BDNFP23560 247 aa17.1■□□□□ 0.33
NEO1-206ENST00000558964 IRAK1P51617 712 aa17.1■□□□□ 0.33
NEO1-206ENST00000558964 GEMIN4P57678 1058 aaKnown RBP17.1■□□□□ 0.33
NEO1-206ENST00000558964 WSCD1Q658N2 575 aa17.1■□□□□ 0.33
NEO1-206ENST00000558964 LINC00523Q86TU6 105 aa17.1■□□□□ 0.33
NEO1-206ENST00000558964 NALCNQ8IZF0 1738 aa17.1■□□□□ 0.33
NEO1-206ENST00000558964 EPS8L3Q8TE67 593 aaKnown RBP17.1■□□□□ 0.33
NEO1-206ENST00000558964 HDAC7Q8WUI4 952 aa17.1■□□□□ 0.33
NEO1-206ENST00000558964 SHC3Q92529 594 aa17.1■□□□□ 0.33
NEO1-206ENST00000558964 CCDC124Q96CT7 223 aaKnown RBP17.1■□□□□ 0.33
NEO1-206ENST00000558964 CDC42EP4Q9H3Q1 356 aaKnown RBP17.1■□□□□ 0.33
NEO1-206ENST00000558964 SMPD4Q9NXE4 827 aa17.1■□□□□ 0.33
NEO1-206ENST00000558964 EIF3HO15372 352 aaKnown RBP eCLIP17.09■□□□□ 0.33
NEO1-206ENST00000558964 ASS1P00966 412 aaKnown RBP17.09■□□□□ 0.33
NEO1-206ENST00000558964 PRKAR2AP13861 404 aaKnown RBP17.09■□□□□ 0.33
NEO1-206ENST00000558964 MIPP30301 263 aa17.09■□□□□ 0.33
NEO1-206ENST00000558964 FAM110CQ1W6H9 321 aa17.09■□□□□ 0.33
NEO1-206ENST00000558964 ZRANB3Q5FWF4 1079 aa17.09■□□□□ 0.33
NEO1-206ENST00000558964 C1orf146Q5VVC0 180 aa17.09■□□□□ 0.33
NEO1-206ENST00000558964 BAP1Q92560 729 aa17.09■□□□□ 0.33
NEO1-206ENST00000558964 APBA2Q99767 749 aa17.09■□□□□ 0.33
NEO1-206ENST00000558964 FRMD8P1Q9BZ68 369 aaPredicted RBP17.09■□□□□ 0.33
NEO1-206ENST00000558964 ENTPD7Q9NQZ7 604 aa17.09■□□□□ 0.33
NEO1-206ENST00000558964 HIST1H2AGP0C0S8 130 aaPredicted RBP17.09■□□□□ 0.33
NEO1-206ENST00000558964 HIST1H2ADP20671 130 aa17.09■□□□□ 0.33
NEO1-206ENST00000558964 ZNF280AP59817 542 aaPredicted RBP17.09■□□□□ 0.33
NEO1-206ENST00000558964 DUSP28Q4G0W2 176 aa17.09■□□□□ 0.33
NEO1-206ENST00000558964 ARHGAP15Q53QZ3 475 aa17.09■□□□□ 0.33
NEO1-206ENST00000558964 RNF217Q8TC41 542 aa17.09■□□□□ 0.33
NEO1-206ENST00000558964 NCLNQ969V3 563 aa17.09■□□□□ 0.33
NEO1-206ENST00000558964 HIST1H2AHQ96KK5 128 aa17.09■□□□□ 0.33
NEO1-206ENST00000558964 FAM161BQ96MY7 647 aa17.09■□□□□ 0.33
NEO1-206ENST00000558964 HIST1H2AJQ99878 128 aa17.09■□□□□ 0.33
NEO1-206ENST00000558964 H2AFJQ9BTM1 129 aa17.09■□□□□ 0.33
NEO1-206ENST00000558964 SENP6Q9GZR1 1112 aaPredicted RBP17.09■□□□□ 0.33
NEO1-206ENST00000558964 DMAP1Q9NPF5 467 aaPredicted RBP17.09■□□□□ 0.33
NEO1-206ENST00000558964 GRID1Q9ULK0 1009 aa17.09■□□□□ 0.33
NEO1-206ENST00000558964 MRPL42Q9Y6G3 142 aaKnown RBP17.09■□□□□ 0.33
NEO1-206ENST00000558964 XRN1Q8IZH2 1706 aaKnown RBP17.09■□□□□ 0.33
NEO1-206ENST00000558964 ONECUT3O60422 494 aaPredicted RBP17.09■□□□□ 0.33
NEO1-206ENST00000558964 ANP32DO95626 131 aa17.09■□□□□ 0.33
NEO1-206ENST00000558964 H2AFXP16104 143 aaPredicted RBP17.09■□□□□ 0.33
NEO1-206ENST00000558964 CHRM3P20309 590 aa17.09■□□□□ 0.33
NEO1-206ENST00000558964 CCR1P32246 355 aa17.09■□□□□ 0.33
NEO1-206ENST00000558964 RTP1P59025 263 aa17.09■□□□□ 0.33
NEO1-206ENST00000558964 DENND1BQ6P3S1 775 aa17.09■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 51 ms