RNA–Protein interactions for RNA: ENST00000558879.5

LRRC28-210, Transcript of leucine rich repeat containing 28, humanhuman

TSL 4 BASIC

Gene LRRC28, Length 581 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-210ENST00000558879 ERCC4Q92889 916 aaPredicted RBP18.03■□□□□ 0.48
LRRC28-210ENST00000558879 EEF2KMTQ96G04 330 aa18.03■□□□□ 0.48
LRRC28-210ENST00000558879 ZFRQ96KR1 1074 aaKnown RBP18.03■□□□□ 0.48
LRRC28-210ENST00000558879 MMRN2Q9H8L6 949 aa18.03■□□□□ 0.48
LRRC28-210ENST00000558879 FBRSL1Q9HCM7 1045 aaKnown RBP18.03■□□□□ 0.48
LRRC28-210ENST00000558879 FAM49BQ9NUQ9 324 aa18.03■□□□□ 0.48
LRRC28-210ENST00000558879 HHLA1C9JL84 531 aa18.02■□□□□ 0.48
LRRC28-210ENST00000558879 CETN3O15182 167 aa18.02■□□□□ 0.48
LRRC28-210ENST00000558879 SMC2O95347 1197 aa18.02■□□□□ 0.48
LRRC28-210ENST00000558879 NFATC1O95644 943 aa18.02■□□□□ 0.48
LRRC28-210ENST00000558879 EGFP01133 1207 aa18.02■□□□□ 0.48
LRRC28-210ENST00000558879 EPB41P11171 864 aaKnown RBP18.02■□□□□ 0.48
LRRC28-210ENST00000558879 DRD1P21728 446 aa18.02■□□□□ 0.48
LRRC28-210ENST00000558879 LRRC63Q05C16 580 aa18.02■□□□□ 0.48
LRRC28-210ENST00000558879 CLEC20AQ6ZU45 233 aa18.02■□□□□ 0.48
LRRC28-210ENST00000558879 DDX42Q86XP3 938 aaKnown RBP eCLIP18.02■□□□□ 0.48
LRRC28-210ENST00000558879 SEMA4DQ92854 862 aa18.02■□□□□ 0.48
LRRC28-210ENST00000558879 SMARCE1Q969G3 411 aa18.02■□□□□ 0.48
LRRC28-210ENST00000558879 HNRNPABQ99729 332 aaKnown RBP18.02■□□□□ 0.48
LRRC28-210ENST00000558879 DUSP9Q99956 384 aaKnown RBP18.02■□□□□ 0.48
LRRC28-210ENST00000558879 P2RY13Q9BPV8 354 aa18.02■□□□□ 0.48
LRRC28-210ENST00000558879 NT5C1AQ9BXI3 368 aa18.02■□□□□ 0.48
LRRC28-210ENST00000558879 PNPLA8Q9NP80 782 aa18.02■□□□□ 0.48
LRRC28-210ENST00000558879 UTP3Q9NQZ2 479 aaKnown RBP eCLIP18.02■□□□□ 0.487e-8■■■■■ 186.3
LRRC28-210ENST00000558879 TNRC6BQ9UPQ9 1833 aaKnown RBP18.02■□□□□ 0.47
LRRC28-210ENST00000558879 CEP192Q8TEP8 1941 aa18.02■□□□□ 0.47
LRRC28-210ENST00000558879 TRIM49BA6NDI0 452 aa18.01■□□□□ 0.47
LRRC28-210ENST00000558879 CHURC1-FNTBB4DL54 471 aa18.01■□□□□ 0.47
LRRC28-210ENST00000558879 COCHO43405 550 aa18.01■□□□□ 0.47
LRRC28-210ENST00000558879 CYP17A1P05093 508 aa18.01■□□□□ 0.47
LRRC28-210ENST00000558879 FAM200BP0CF97 657 aa18.01■□□□□ 0.47
LRRC28-210ENST00000558879 GALK1P51570 392 aa18.01■□□□□ 0.47
LRRC28-210ENST00000558879 FKBP3Q00688 224 aaKnown RBP18.01■□□□□ 0.47
LRRC28-210ENST00000558879 FBXO43Q4G163 708 aa18.01■□□□□ 0.47
LRRC28-210ENST00000558879 ANKRD40Q6AI12 368 aa18.01■□□□□ 0.47
LRRC28-210ENST00000558879 GPRIN1Q7Z2K8 1008 aa18.01■□□□□ 0.47
LRRC28-210ENST00000558879 FBXL13Q8NEE6 735 aa18.01■□□□□ 0.47
LRRC28-210ENST00000558879 TTC16Q8NEE8 873 aa18.01■□□□□ 0.47
LRRC28-210ENST00000558879 CD101Q93033 1021 aa18.01■□□□□ 0.47
LRRC28-210ENST00000558879 GTPBP4Q9BZE4 634 aaKnown RBP18.01■□□□□ 0.47
LRRC28-210ENST00000558879 LINC00597Q9H2U6 94 aa18.01■□□□□ 0.47
LRRC28-210ENST00000558879 GMIPQ9P107 970 aa18.01■□□□□ 0.47
LRRC28-210ENST00000558879 COQ4Q9Y3A0 265 aa18.01■□□□□ 0.47
LRRC28-210ENST00000558879 STX10O60499 249 aa18■□□□□ 0.47
LRRC28-210ENST00000558879 RNF40O75150 1001 aa18■□□□□ 0.47
LRRC28-210ENST00000558879 ABL1P00519 1130 aa18■□□□□ 0.47
LRRC28-210ENST00000558879 MBL2P11226 248 aaPredicted RBP18■□□□□ 0.47
LRRC28-210ENST00000558879 TRIM21P19474 475 aaKnown RBP18■□□□□ 0.47
LRRC28-210ENST00000558879 ADORA2BP29275 332 aa18■□□□□ 0.47
LRRC28-210ENST00000558879 HOXC13P31276 330 aa18■□□□□ 0.47
LRRC28-210ENST00000558879 OPRD1P41143 372 aa18■□□□□ 0.47
LRRC28-210ENST00000558879 FNTBP49356 437 aa18■□□□□ 0.47
LRRC28-210ENST00000558879 MAP3K7CLP57077 242 aa18■□□□□ 0.47
LRRC28-210ENST00000558879 CBWD6Q4V339 395 aa18■□□□□ 0.47
LRRC28-210ENST00000558879 CBWD3Q5JTY5 395 aa18■□□□□ 0.47
LRRC28-210ENST00000558879 CBWD5Q5RIA9 395 aa18■□□□□ 0.47
LRRC28-210ENST00000558879 FILIP1Q7Z7B0 1213 aa18■□□□□ 0.47
LRRC28-210ENST00000558879 LONP2Q86WA8 852 aa18■□□□□ 0.47
LRRC28-210ENST00000558879 DCLK2Q8N568 766 aa18■□□□□ 0.47
LRRC28-210ENST00000558879 CCDC150Q8NCX0 1101 aa18■□□□□ 0.47
LRRC28-210ENST00000558879 EXOC4Q96A65 974 aa18■□□□□ 0.47
LRRC28-210ENST00000558879 TSG101Q99816 390 aa18■□□□□ 0.47
LRRC28-210ENST00000558879 FBXO44Q9H4M3 255 aa18■□□□□ 0.47
LRRC28-210ENST00000558879 FAM124BQ9H5Z6 455 aaPredicted RBP18■□□□□ 0.47
LRRC28-210ENST00000558879 CCSER2Q9H7U1 834 aa18■□□□□ 0.47
LRRC28-210ENST00000558879 RAB20Q9NX57 234 aa18■□□□□ 0.47
LRRC28-210ENST00000558879 SMPD4Q9NXE4 827 aa18■□□□□ 0.47
LRRC28-210ENST00000558879 HOOK1Q9UJC3 728 aaKnown RBP18■□□□□ 0.47
LRRC28-210ENST00000558879 THADAQ6YHU6 1953 aa17.99■□□□□ 0.47
LRRC28-210ENST00000558879 CD58P19256 250 aa17.99■□□□□ 0.47
LRRC28-210ENST00000558879 PGFP49763 221 aa17.99■□□□□ 0.47
LRRC28-210ENST00000558879 NR1H3Q13133 447 aa17.99■□□□□ 0.47
LRRC28-210ENST00000558879 HECTD3Q5T447 861 aa17.99■□□□□ 0.47
LRRC28-210ENST00000558879 WDR5BQ86VZ2 330 aa17.99■□□□□ 0.47
LRRC28-210ENST00000558879 SLC35C1Q96A29 364 aa17.99■□□□□ 0.47
LRRC28-210ENST00000558879 CYFIP2Q96F07 1278 aa17.99■□□□□ 0.47
LRRC28-210ENST00000558879 ARID3AQ99856 593 aa17.99■□□□□ 0.47
LRRC28-210ENST00000558879 CFAP97Q9P2B7 532 aa17.99■□□□□ 0.47
LRRC28-210ENST00000558879 NCDNQ9UBB6 729 aa17.99■□□□□ 0.47
LRRC28-210ENST00000558879 CACNA1AO00555 2505 aa17.98■□□□□ 0.47
LRRC28-210ENST00000558879 E2F8A0AVK6 867 aa17.98■□□□□ 0.47
LRRC28-210ENST00000558879 SLC9A3R1O14745 358 aaPredicted RBP17.98■□□□□ 0.47
LRRC28-210ENST00000558879 CD44P16070 742 aaKnown RBP17.98■□□□□ 0.47
LRRC28-210ENST00000558879 CNR2P34972 360 aa17.98■□□□□ 0.47
LRRC28-210ENST00000558879 DCAF17Q5H9S7 520 aaPredicted RBP17.98■□□□□ 0.47
LRRC28-210ENST00000558879 PPP1R26Q5T8A7 1209 aaPredicted RBP17.98■□□□□ 0.47
LRRC28-210ENST00000558879 KIAA2013Q8IYS2 634 aa17.98■□□□□ 0.47
LRRC28-210ENST00000558879 ADGRG2Q8IZP9 1017 aa17.98■□□□□ 0.47
LRRC28-210ENST00000558879 TTC39CQ8N584 583 aa17.98■□□□□ 0.47
LRRC28-210ENST00000558879 HINFPQ9BQA5 517 aa17.98■□□□□ 0.47
LRRC28-210ENST00000558879 CYLDQ9NQC7 956 aa17.98■□□□□ 0.47
LRRC28-210ENST00000558879 CISHQ9NSE2 258 aa17.98■□□□□ 0.47
LRRC28-210ENST00000558879 CHORDC1Q9UHD1 332 aaPredicted RBP17.98■□□□□ 0.47
LRRC28-210ENST00000558879 MAN1B1Q9UKM7 699 aa17.98■□□□□ 0.47
LRRC28-210ENST00000558879 CIZ1Q9ULV3 898 aaPredicted RBP17.98■□□□□ 0.47
LRRC28-210ENST00000558879 SCML2Q9UQR0 700 aa17.98■□□□□ 0.47
LRRC28-210ENST00000558879 CCDC163A0A0D9SF12 145 aa17.97■□□□□ 0.47
LRRC28-210ENST00000558879 PSMA7O14818 248 aa17.97■□□□□ 0.47
LRRC28-210ENST00000558879 HRO43593 1189 aa17.97■□□□□ 0.47
LRRC28-210ENST00000558879 TLR5O60602 858 aa17.97■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms