RNA–Protein interactions for RNA: ENST00000558731.1

CSPG4P5-201, Transcript of chondroitin sulfate proteoglycan 4 pseudogene 5, humanhuman

BASIC

Gene CSPG4P5, Length 3,730 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P5-201ENST00000558731 PIAS1O75925 651 aa11.31□□□□□ -0.6
CSPG4P5-201ENST00000558731 BEST1O76090 585 aa11.31□□□□□ -0.6
CSPG4P5-201ENST00000558731 FAM200BP0CF97 657 aa11.31□□□□□ -0.6
CSPG4P5-201ENST00000558731 BDNFP23560 247 aa11.31□□□□□ -0.6
CSPG4P5-201ENST00000558731 MAP2K2P36507 400 aa11.31□□□□□ -0.6
CSPG4P5-201ENST00000558731 EIF3EP60228 445 aaKnown RBP11.31□□□□□ -0.6
CSPG4P5-201ENST00000558731 INCA1Q0VD86 236 aa11.31□□□□□ -0.6
CSPG4P5-201ENST00000558731 LPIN1Q14693 890 aa11.31□□□□□ -0.6
CSPG4P5-201ENST00000558731 KYNUQ16719 465 aa11.31□□□□□ -0.6
CSPG4P5-201ENST00000558731 UBAP2Q5T6F2 1119 aaKnown RBP11.31□□□□□ -0.6
CSPG4P5-201ENST00000558731 TMC3Q7Z5M5 1100 aa11.31□□□□□ -0.6
CSPG4P5-201ENST00000558731 CAVIN3Q969G5 261 aa11.31□□□□□ -0.6
CSPG4P5-201ENST00000558731 DDX23Q9BUQ8 820 aaKnown RBP11.31□□□□□ -0.6
CSPG4P5-201ENST00000558731 RNF208Q9H0X6 261 aa11.31□□□□□ -0.6
CSPG4P5-201ENST00000558731 VPS37BQ9H9H4 285 aa11.31□□□□□ -0.6
CSPG4P5-201ENST00000558731 TTLL3Q9Y4R7 772 aa11.31□□□□□ -0.6
CSPG4P5-201ENST00000558731 RBP3P10745 1247 aa11.31□□□□□ -0.6
CSPG4P5-201ENST00000558731 PTGIRP43119 386 aa11.31□□□□□ -0.6
CSPG4P5-201ENST00000558731 FNTAP49354 379 aa11.31□□□□□ -0.6
CSPG4P5-201ENST00000558731 TKTL1P51854 596 aa11.31□□□□□ -0.6
CSPG4P5-201ENST00000558731 SLC6A3Q01959 620 aa11.31□□□□□ -0.6
CSPG4P5-201ENST00000558731 TIGD5Q53EQ6 642 aa11.31□□□□□ -0.6
CSPG4P5-201ENST00000558731 P3H4Q92791 437 aa11.31□□□□□ -0.6
CSPG4P5-201ENST00000558731 SNF8Q96H20 258 aa11.31□□□□□ -0.6
CSPG4P5-201ENST00000558731 B3GALT6Q96L58 329 aa11.31□□□□□ -0.6
CSPG4P5-201ENST00000558731 VIPAS39Q9H9C1 493 aa11.31□□□□□ -0.6
CSPG4P5-201ENST00000558731 TMPRSS4Q9NRS4 437 aa11.31□□□□□ -0.6
CSPG4P5-201ENST00000558731 DDX56Q9NY93 547 aaKnown RBP11.31□□□□□ -0.6
CSPG4P5-201ENST00000558731 KIAA1257Q9ULG3 409 aa11.31□□□□□ -0.6
CSPG4P5-201ENST00000558731 MAGED2Q9UNF1 606 aaPredicted RBP11.31□□□□□ -0.6
CSPG4P5-201ENST00000558731 PIRO00625 290 aa11.3□□□□□ -0.6
CSPG4P5-201ENST00000558731 SHBGP04278 402 aa11.3□□□□□ -0.6
CSPG4P5-201ENST00000558731 USP17L7P0C7H9 530 aa11.3□□□□□ -0.6
CSPG4P5-201ENST00000558731 KDELR1P24390 212 aa11.3□□□□□ -0.6
CSPG4P5-201ENST00000558731 CHKAP35790 457 aa11.3□□□□□ -0.6
CSPG4P5-201ENST00000558731 MTMR3Q13615 1198 aa11.3□□□□□ -0.6
CSPG4P5-201ENST00000558731 STILQ15468 1287 aa11.3□□□□□ -0.6
CSPG4P5-201ENST00000558731 UAP1Q16222 522 aaPredicted RBP11.3□□□□□ -0.6
CSPG4P5-201ENST00000558731 SDHAF4Q5VUM1 108 aa11.3□□□□□ -0.6
CSPG4P5-201ENST00000558731 ALS2CLQ60I27 953 aa11.3□□□□□ -0.6
CSPG4P5-201ENST00000558731 TADA2BQ86TJ2 420 aa11.3□□□□□ -0.6
CSPG4P5-201ENST00000558731 ANKMY2Q8IV38 441 aa11.3□□□□□ -0.6
CSPG4P5-201ENST00000558731 DEFB106AQ8N104 65 aa11.3□□□□□ -0.6
CSPG4P5-201ENST00000558731 SLC7A14Q8TBB6 771 aa11.3□□□□□ -0.6
CSPG4P5-201ENST00000558731 MGARPQ8TDB4 240 aa11.3□□□□□ -0.6
CSPG4P5-201ENST00000558731 ABI2Q9NYB9 513 aaPredicted RBP11.3□□□□□ -0.6
CSPG4P5-201ENST00000558731 LRFN2Q9ULH4 789 aa11.3□□□□□ -0.6
CSPG4P5-201ENST00000558731 DERAQ9Y315 318 aa11.3□□□□□ -0.6
CSPG4P5-201ENST00000558731 ZBTB6Q15916 424 aa11.3□□□□□ -0.6
CSPG4P5-201ENST00000558731 LRRC31Q6UY01 552 aa11.3□□□□□ -0.6
CSPG4P5-201ENST00000558731 MAP7D3Q8IWC1 876 aa11.3□□□□□ -0.6
CSPG4P5-201ENST00000558731 SAYSD1Q9NPB0 183 aa11.3□□□□□ -0.6
CSPG4P5-201ENST00000558731 GEMIN8Q9NWZ8 242 aaKnown RBP11.3□□□□□ -0.6
CSPG4P5-201ENST00000558731 NR2E3Q9Y5X4 410 aa11.3□□□□□ -0.6
CSPG4P5-201ENST00000558731 hCG_1818297A0A087WSY0 165 aa11.3□□□□□ -0.6
CSPG4P5-201ENST00000558731 M0QYT0 321 aa11.3□□□□□ -0.6
CSPG4P5-201ENST00000558731 ITGB1P05556 798 aa11.3□□□□□ -0.6
CSPG4P5-201ENST00000558731 NCAM1P13591 858 aa11.3□□□□□ -0.6
CSPG4P5-201ENST00000558731 ZNF143P52747 638 aaPredicted RBP11.3□□□□□ -0.6
CSPG4P5-201ENST00000558731 GNGT1P63211 74 aa11.3□□□□□ -0.6
CSPG4P5-201ENST00000558731 PCBP1Q15365 356 aaKnown RBP eCLIP11.3□□□□□ -0.6
CSPG4P5-201ENST00000558731 SIX1Q15475 284 aaPredicted RBP11.3□□□□□ -0.6
CSPG4P5-201ENST00000558731 CA9Q16790 459 aa11.3□□□□□ -0.6
CSPG4P5-201ENST00000558731 LONRF1Q17RB8 773 aa11.3□□□□□ -0.6
CSPG4P5-201ENST00000558731 TTMPQ5BVD1 217 aa11.3□□□□□ -0.6
CSPG4P5-201ENST00000558731 SPOUT1Q5T280 376 aaKnown RBP11.3□□□□□ -0.6
CSPG4P5-201ENST00000558731 ARFGAP1Q8N6T3 406 aa11.3□□□□□ -0.6
CSPG4P5-201ENST00000558731 ANKRD52Q8NB46 1076 aa11.3□□□□□ -0.6
CSPG4P5-201ENST00000558731 CCNYQ8ND76 341 aa11.3□□□□□ -0.6
CSPG4P5-201ENST00000558731 GIMAP7Q8NHV1 300 aa11.3□□□□□ -0.6
CSPG4P5-201ENST00000558731 SCLYQ96I15 445 aa11.3□□□□□ -0.6
CSPG4P5-201ENST00000558731 PEBP4Q96S96 227 aa11.3□□□□□ -0.6
CSPG4P5-201ENST00000558731 CEP41Q9BYV8 373 aa11.3□□□□□ -0.6
CSPG4P5-201ENST00000558731 ULBP1Q9BZM6 244 aa11.3□□□□□ -0.6
CSPG4P5-201ENST00000558731 ZSWIM8A7E2V4 1837 aa11.29□□□□□ -0.6
CSPG4P5-201ENST00000558731 POC1B-GALNT4F8VUJ3 575 aa11.29□□□□□ -0.6
CSPG4P5-201ENST00000558731 BANF1O75531 89 aa11.29□□□□□ -0.6
CSPG4P5-201ENST00000558731 PFKMP08237 780 aa11.29□□□□□ -0.6
CSPG4P5-201ENST00000558731 PECAM1P16284 738 aaPredicted RBP11.29□□□□□ -0.6
CSPG4P5-201ENST00000558731 ECHS1P30084 290 aa11.29□□□□□ -0.6
CSPG4P5-201ENST00000558731 PITX1P78337 314 aaPredicted RBP11.29□□□□□ -0.6
CSPG4P5-201ENST00000558731 RNF187Q5TA31 235 aaPredicted RBP11.29□□□□□ -0.6
CSPG4P5-201ENST00000558731 UNC93AQ86WB7 457 aa11.29□□□□□ -0.6
CSPG4P5-201ENST00000558731 PGBD4Q96DM1 585 aa11.29□□□□□ -0.6
CSPG4P5-201ENST00000558731 VRTNQ9H8Y1 702 aa11.29□□□□□ -0.6
CSPG4P5-201ENST00000558731 PCYOX1Q9UHG3 505 aa11.29□□□□□ -0.6
CSPG4P5-201ENST00000558731 FKTNO75072 461 aa11.29□□□□□ -0.6
CSPG4P5-201ENST00000558731 CORO7P57737 925 aa11.29□□□□□ -0.6
CSPG4P5-201ENST00000558731 POU5F1Q01860 360 aaKnown RBP11.29□□□□□ -0.6
CSPG4P5-201ENST00000558731 MTFR1Q15390 333 aa11.29□□□□□ -0.6
CSPG4P5-201ENST00000558731 CCDC14Q49A88 953 aa11.29□□□□□ -0.6
CSPG4P5-201ENST00000558731 TRNP1Q6NT89 227 aa11.29□□□□□ -0.6
CSPG4P5-201ENST00000558731 FUKQ8N0W3 1084 aa11.29□□□□□ -0.6
CSPG4P5-201ENST00000558731 BCAS4Q8TDM0 211 aa11.29□□□□□ -0.6
CSPG4P5-201ENST00000558731 GPR152Q8TDT2 470 aa11.29□□□□□ -0.6
CSPG4P5-201ENST00000558731 PCED1BQ96HM7 432 aa11.29□□□□□ -0.6
CSPG4P5-201ENST00000558731 SNRNP25Q9BV90 132 aaKnown RBP11.29□□□□□ -0.6
CSPG4P5-201ENST00000558731 SIK2Q9H0K1 926 aa11.29□□□□□ -0.6
CSPG4P5-201ENST00000558731 LRRC19Q9H756 370 aa11.29□□□□□ -0.6
CSPG4P5-201ENST00000558731 MLXIPLQ9NP71 852 aa11.29□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms