RNA–Protein interactions for RNA: ENST00000558428.5

SMAD3-205, Transcript of SMAD family member 3, humanhuman

TSL 4

Gene SMAD3, Length 554 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-205ENST00000558428 USP13Q92995 863 aaPredicted RBP13.03□□□□□ -0.32
SMAD3-205ENST00000558428 RSPRY1Q96DX4 576 aa13.03□□□□□ -0.32
SMAD3-205ENST00000558428 SLC22A12Q96S37 553 aa13.03□□□□□ -0.32
SMAD3-205ENST00000558428 CYP2S1Q96SQ9 504 aa13.03□□□□□ -0.32
SMAD3-205ENST00000558428 TRMT61BQ9BVS5 477 aaKnown RBP13.03□□□□□ -0.32
SMAD3-205ENST00000558428 C1QTNF1Q9BXJ1 281 aa13.03□□□□□ -0.32
SMAD3-205ENST00000558428 ACP6Q9NPH0 428 aa13.03□□□□□ -0.32
SMAD3-205ENST00000558428 PLCB1Q9NQ66 1216 aa13.03□□□□□ -0.32
SMAD3-205ENST00000558428 SLC2A4RGQ9NR83 387 aa13.03□□□□□ -0.32
SMAD3-205ENST00000558428 FAM207AQ9NSI2 230 aaPredicted RBP13.03□□□□□ -0.32
SMAD3-205ENST00000558428 TDP1Q9NUW8 608 aa13.03□□□□□ -0.32
SMAD3-205ENST00000558428 OBP2AQ9NY56 170 aa13.03□□□□□ -0.32
SMAD3-205ENST00000558428 SCML2Q9UQR0 700 aa13.03□□□□□ -0.32
SMAD3-205ENST00000558428 CCL26Q9Y258 94 aa13.03□□□□□ -0.32
SMAD3-205ENST00000558428 GOLGA6L19H0YKK7 550 aa13.02□□□□□ -0.33
SMAD3-205ENST00000558428 OAS1P00973 400 aaKnown RBP13.02□□□□□ -0.33
SMAD3-205ENST00000558428 ZDHHC11BP0C7U3 371 aa13.02□□□□□ -0.33
SMAD3-205ENST00000558428 PNMA6AP0CW24 399 aaPredicted RBP13.02□□□□□ -0.33
SMAD3-205ENST00000558428 PFKLP17858 780 aa13.02□□□□□ -0.33
SMAD3-205ENST00000558428 GDI1P31150 447 aa13.02□□□□□ -0.33
SMAD3-205ENST00000558428 PLA2G4AP47712 749 aa13.02□□□□□ -0.33
SMAD3-205ENST00000558428 ZNF268Q14587 947 aaPredicted RBP13.02□□□□□ -0.33
SMAD3-205ENST00000558428 FILIP1LQ4L180 1135 aa13.02□□□□□ -0.33
SMAD3-205ENST00000558428 PKDCCQ504Y2 493 aa13.02□□□□□ -0.33
SMAD3-205ENST00000558428 TTC16Q8NEE8 873 aa13.02□□□□□ -0.33
SMAD3-205ENST00000558428 BPIFB1Q8TDL5 484 aa13.02□□□□□ -0.33
SMAD3-205ENST00000558428 ZNF606Q8WXB4 792 aa13.02□□□□□ -0.33
SMAD3-205ENST00000558428 SECISBP2LQ93073 1101 aaKnown RBP13.02□□□□□ -0.33
SMAD3-205ENST00000558428 ASIC4Q96FT7 647 aa13.02□□□□□ -0.33
SMAD3-205ENST00000558428 ERGIC2Q96RQ1 377 aa13.02□□□□□ -0.33
SMAD3-205ENST00000558428 NAA15Q9BXJ9 866 aaKnown RBP13.02□□□□□ -0.33
SMAD3-205ENST00000558428 GANQ9H2C0 597 aa13.02□□□□□ -0.33
SMAD3-205ENST00000558428 BRD9Q9H8M2 597 aa13.02□□□□□ -0.33
SMAD3-205ENST00000558428 KIF9Q9HAQ2 790 aa13.02□□□□□ -0.33
SMAD3-205ENST00000558428 LRRC4Q9HBW1 653 aa13.02□□□□□ -0.33
SMAD3-205ENST00000558428 TLR8Q9NR97 1041 aaKnown RBP13.02□□□□□ -0.33
SMAD3-205ENST00000558428 SIK3Q9Y2K2 1263 aa13.02□□□□□ -0.33
SMAD3-205ENST00000558428 USP3Q9Y6I4 520 aa13.02□□□□□ -0.33
SMAD3-205ENST00000558428 ZDBF2Q9HCK1 2354 aa13.02□□□□□ -0.33
SMAD3-205ENST00000558428 TICRRQ7Z2Z1 1910 aa13.01□□□□□ -0.33
SMAD3-205ENST00000558428 F5P12259 2224 aa13.01□□□□□ -0.33
SMAD3-205ENST00000558428 A0A1W2PQH9 124 aa13.01□□□□□ -0.33
SMAD3-205ENST00000558428 ZNF263O14978 683 aa13.01□□□□□ -0.33
SMAD3-205ENST00000558428 GPR37L1O60883 481 aa13.01□□□□□ -0.33
SMAD3-205ENST00000558428 SERPINC1P01008 464 aa13.01□□□□□ -0.33
SMAD3-205ENST00000558428 MBL2P11226 248 aaPredicted RBP13.01□□□□□ -0.33
SMAD3-205ENST00000558428 PGFP49763 221 aa13.01□□□□□ -0.33
SMAD3-205ENST00000558428 RGS7P49802 495 aa13.01□□□□□ -0.33
SMAD3-205ENST00000558428 TKTL1P51854 596 aa13.01□□□□□ -0.33
SMAD3-205ENST00000558428 POLR2FP61218 127 aaKnown RBP13.01□□□□□ -0.33
SMAD3-205ENST00000558428 PFKPQ01813 784 aa13.01□□□□□ -0.33
SMAD3-205ENST00000558428 PTK2Q05397 1052 aa13.01□□□□□ -0.33
SMAD3-205ENST00000558428 FCHO2Q0JRZ9 810 aa13.01□□□□□ -0.33
SMAD3-205ENST00000558428 RAB41Q5JT25 222 aa13.01□□□□□ -0.33
SMAD3-205ENST00000558428 TMEM31Q5JXX7 168 aa13.01□□□□□ -0.33
SMAD3-205ENST00000558428 HECTD3Q5T447 861 aa13.01□□□□□ -0.33
SMAD3-205ENST00000558428 SNX30Q5VWJ9 437 aa13.01□□□□□ -0.33
SMAD3-205ENST00000558428 SMYD5Q6GMV2 418 aa13.01□□□□□ -0.33
SMAD3-205ENST00000558428 LRSAM1Q6UWE0 723 aa13.01□□□□□ -0.33
SMAD3-205ENST00000558428 CCDC186Q7Z3E2 898 aa13.01□□□□□ -0.33
SMAD3-205ENST00000558428 FAM71AQ8IYT1 594 aa13.01□□□□□ -0.33
SMAD3-205ENST00000558428 NEK11Q8NG66 645 aa13.01□□□□□ -0.33
SMAD3-205ENST00000558428 LRRC3BQ96PB8 259 aa13.01□□□□□ -0.33
SMAD3-205ENST00000558428 STK33Q9BYT3 514 aa13.01□□□□□ -0.33
SMAD3-205ENST00000558428 NACA2Q9H009 215 aa13.01□□□□□ -0.33
SMAD3-205ENST00000558428 RNF38Q9H0F5 515 aa13.01□□□□□ -0.33
SMAD3-205ENST00000558428 TSPY26PQ9H489 355 aa13.01□□□□□ -0.33
SMAD3-205ENST00000558428 CCSER2Q9H7U1 834 aa13.01□□□□□ -0.33
SMAD3-205ENST00000558428 NMUR1Q9HB89 426 aa13.01□□□□□ -0.33
SMAD3-205ENST00000558428 C11orf16Q9NQ32 467 aa13.01□□□□□ -0.33
SMAD3-205ENST00000558428 RTN4Q9NQC3 1192 aaKnown RBP13.01□□□□□ -0.33
SMAD3-205ENST00000558428 WNT16Q9UBV4 365 aa13.01□□□□□ -0.33
SMAD3-205ENST00000558428 CA14Q9ULX7 337 aa13.01□□□□□ -0.33
SMAD3-205ENST00000558428 KIF26AQ9ULI4 1882 aaPredicted RBP13□□□□□ -0.33
SMAD3-205ENST00000558428 F8VZ95 297 aa13□□□□□ -0.33
SMAD3-205ENST00000558428 EPHB6O15197 1021 aa13□□□□□ -0.33
SMAD3-205ENST00000558428 CHADO15335 359 aa13□□□□□ -0.33
SMAD3-205ENST00000558428 TEX33O43247 280 aa13□□□□□ -0.33
SMAD3-205ENST00000558428 COCHO43405 550 aa13□□□□□ -0.33
SMAD3-205ENST00000558428 TLR5O60602 858 aa13□□□□□ -0.33
SMAD3-205ENST00000558428 OLFM2O95897 454 aa13□□□□□ -0.33
SMAD3-205ENST00000558428 LCP1P13796 627 aa13□□□□□ -0.33
SMAD3-205ENST00000558428 CLCN1P35523 988 aa13□□□□□ -0.33
SMAD3-205ENST00000558428 TUBP50607 506 aa13□□□□□ -0.33
SMAD3-205ENST00000558428 BPIFB4P59827 614 aa13□□□□□ -0.33
SMAD3-205ENST00000558428 SLC7A9P82251 487 aa13□□□□□ -0.33
SMAD3-205ENST00000558428 ADIGQ0VDE8 80 aa13□□□□□ -0.33
SMAD3-205ENST00000558428 MEA1Q16626 185 aa13□□□□□ -0.33
SMAD3-205ENST00000558428 ARHGAP29Q52LW3 1261 aa13□□□□□ -0.33
SMAD3-205ENST00000558428 PMF1Q6P1K2 205 aa13□□□□□ -0.33
SMAD3-205ENST00000558428 DENND1BQ6P3S1 775 aa13□□□□□ -0.33
SMAD3-205ENST00000558428 SLC47A2Q86VL8 602 aa13□□□□□ -0.33
SMAD3-205ENST00000558428 SIX5Q8N196 739 aa13□□□□□ -0.33
SMAD3-205ENST00000558428 SIX6OS1Q8N1H7 587 aa13□□□□□ -0.33
SMAD3-205ENST00000558428 SH3RF2Q8TEC5 729 aa13□□□□□ -0.33
SMAD3-205ENST00000558428 SLC35F5Q8WV83 523 aa13□□□□□ -0.33
SMAD3-205ENST00000558428 KCTD13Q8WZ19 329 aa13□□□□□ -0.33
SMAD3-205ENST00000558428 DNASE1L2Q92874 299 aa13□□□□□ -0.33
SMAD3-205ENST00000558428 IRF7Q92985 503 aa13□□□□□ -0.33
SMAD3-205ENST00000558428 SPAG5Q96R06 1193 aa13□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms