RNA–Protein interactions for RNA: ENST00000558138.1

SPG11-207, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 5

Gene SPG11, Length 750 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-207ENST00000558138 SH3BP1Q9Y3L3 701 aa9.47□□□□□ -0.89
SPG11-207ENST00000558138 CEP83Q9Y592 693 aa9.47□□□□□ -0.89
SPG11-207ENST00000558138 CPQQ9Y646 472 aa9.47□□□□□ -0.89
SPG11-207ENST00000558138 SOBPA7XYQ1 873 aa9.46□□□□□ -0.9
SPG11-207ENST00000558138 O00370 1275 aa9.46□□□□□ -0.9
SPG11-207ENST00000558138 PIK3R2O00459 728 aa9.46□□□□□ -0.9
SPG11-207ENST00000558138 XPO1O14980 1071 aaKnown RBP9.46□□□□□ -0.9
SPG11-207ENST00000558138 CHADO15335 359 aa9.46□□□□□ -0.9
SPG11-207ENST00000558138 SERPINC1P01008 464 aa9.46□□□□□ -0.9
SPG11-207ENST00000558138 PDGFBP01127 241 aaPredicted RBP9.46□□□□□ -0.9
SPG11-207ENST00000558138 CALCAP01258 141 aa9.46□□□□□ -0.9
SPG11-207ENST00000558138 PFKLP17858 780 aa9.46□□□□□ -0.9
SPG11-207ENST00000558138 KRT9P35527 623 aa9.46□□□□□ -0.9
SPG11-207ENST00000558138 PTK2Q05397 1052 aa9.46□□□□□ -0.9
SPG11-207ENST00000558138 PDE4CQ08493 712 aa9.46□□□□□ -0.9
SPG11-207ENST00000558138 ADIGQ0VDE8 80 aa9.46□□□□□ -0.9
SPG11-207ENST00000558138 MTF1Q14872 753 aa9.46□□□□□ -0.9
SPG11-207ENST00000558138 ZSCAN23Q3MJ62 389 aa9.46□□□□□ -0.9
SPG11-207ENST00000558138 SLC44A4Q53GD3 710 aa9.46□□□□□ -0.9
SPG11-207ENST00000558138 MIIPQ5JXC2 388 aa9.46□□□□□ -0.9
SPG11-207ENST00000558138 CDKAL1Q5VV42 579 aa9.46□□□□□ -0.9
SPG11-207ENST00000558138 POTEHQ6S545 545 aa9.46□□□□□ -0.9
SPG11-207ENST00000558138 TTC30AQ86WT1 665 aa9.46□□□□□ -0.9
SPG11-207ENST00000558138 DDX42Q86XP3 938 aaKnown RBP eCLIP9.46□□□□□ -0.9
SPG11-207ENST00000558138 ARHGAP18Q8N392 663 aa9.46□□□□□ -0.9
SPG11-207ENST00000558138 FBXL6Q8N531 539 aa9.46□□□□□ -0.9
SPG11-207ENST00000558138 UBR7Q8N806 425 aa9.46□□□□□ -0.9
SPG11-207ENST00000558138 NEK11Q8NG66 645 aa9.46□□□□□ -0.9
SPG11-207ENST00000558138 SH3RF2Q8TEC5 729 aa9.46□□□□□ -0.9
SPG11-207ENST00000558138 DNASE1L2Q92874 299 aa9.46□□□□□ -0.9
SPG11-207ENST00000558138 SECISBP2LQ93073 1101 aaKnown RBP9.46□□□□□ -0.9
SPG11-207ENST00000558138 ASIC4Q96FT7 647 aa9.46□□□□□ -0.9
SPG11-207ENST00000558138 SPAG5Q96R06 1193 aa9.46□□□□□ -0.9
SPG11-207ENST00000558138 BPIFA3Q9BQP9 254 aa9.46□□□□□ -0.9
SPG11-207ENST00000558138 SYNCQ9H7C4 482 aa9.46□□□□□ -0.9
SPG11-207ENST00000558138 CCSER2Q9H7U1 834 aa9.46□□□□□ -0.9
SPG11-207ENST00000558138 FAM207AQ9NSI2 230 aaPredicted RBP9.46□□□□□ -0.9
SPG11-207ENST00000558138 DUS2Q9NX74 493 aaKnown RBP9.46□□□□□ -0.9
SPG11-207ENST00000558138 RASAL2Q9UJF2 1139 aa9.46□□□□□ -0.9
SPG11-207ENST00000558138 WDR3Q9UNX4 943 aaKnown RBP eCLIP9.46□□□□□ -0.9
SPG11-207ENST00000558138 CCL26Q9Y258 94 aa9.46□□□□□ -0.9
SPG11-207ENST00000558138 MRPS17Q9Y2R5 130 aaKnown RBP9.46□□□□□ -0.9
SPG11-207ENST00000558138 PIAS3Q9Y6X2 628 aa9.46□□□□□ -0.9
SPG11-207ENST00000558138 OBSL1O75147 1896 aa9.46□□□□□ -0.9
SPG11-207ENST00000558138 CUL9Q8IWT3 2517 aa9.46□□□□□ -0.9
SPG11-207ENST00000558138 GREB1Q4ZG55 1949 aa9.45□□□□□ -0.9
SPG11-207ENST00000558138 A0A1W2PQH9 124 aa9.45□□□□□ -0.9
SPG11-207ENST00000558138 KRBA1A5PL33 1030 aa9.45□□□□□ -0.9
SPG11-207ENST00000558138 RNF225M0QZC1 329 aaPredicted RBP9.45□□□□□ -0.9
SPG11-207ENST00000558138 LEFTY2O00292 366 aa9.45□□□□□ -0.9
SPG11-207ENST00000558138 MAN2B1O00754 1011 aa9.45□□□□□ -0.9
SPG11-207ENST00000558138 TNFRSF10BO14763 440 aa9.45□□□□□ -0.9
SPG11-207ENST00000558138 SCAMP3O14828 347 aaKnown RBP9.45□□□□□ -0.9
SPG11-207ENST00000558138 TLR5O60602 858 aa9.45□□□□□ -0.9
SPG11-207ENST00000558138 ZBED1O96006 694 aa9.45□□□□□ -0.9
SPG11-207ENST00000558138 RARGP13631 454 aa9.45□□□□□ -0.9
SPG11-207ENST00000558138 ATP5C1P36542 298 aaKnown RBP9.45□□□□□ -0.9
SPG11-207ENST00000558138 PSEN1P49768 467 aa9.45□□□□□ -0.9
SPG11-207ENST00000558138 PRKCQQ04759 706 aa9.45□□□□□ -0.9
SPG11-207ENST00000558138 ZNF268Q14587 947 aaPredicted RBP9.45□□□□□ -0.9
SPG11-207ENST00000558138 SYCP1Q15431 976 aa9.45□□□□□ -0.9
SPG11-207ENST00000558138 CNGA2Q16280 664 aa9.45□□□□□ -0.9
SPG11-207ENST00000558138 C10orf120Q5SQS8 335 aa9.45□□□□□ -0.9
SPG11-207ENST00000558138 BTBD8Q5XKL5 378 aa9.45□□□□□ -0.9
SPG11-207ENST00000558138 TRIM68Q6AZZ1 485 aa9.45□□□□□ -0.9
SPG11-207ENST00000558138 LCLAT1Q6UWP7 414 aa9.45□□□□□ -0.9
SPG11-207ENST00000558138 ZNF852Q6ZMS4 543 aa9.45□□□□□ -0.9
SPG11-207ENST00000558138 CACNA2D4Q7Z3S7 1137 aa9.45□□□□□ -0.9
SPG11-207ENST00000558138 PASD1Q8IV76 773 aa9.45□□□□□ -0.9
SPG11-207ENST00000558138 CPA6Q8N4T0 437 aa9.45□□□□□ -0.9
SPG11-207ENST00000558138 RNF139Q8WU17 664 aa9.45□□□□□ -0.9
SPG11-207ENST00000558138 TFAP2BQ92481 460 aa9.45□□□□□ -0.9
SPG11-207ENST00000558138 EXOC4Q96A65 974 aa9.45□□□□□ -0.9
SPG11-207ENST00000558138 RSPRY1Q96DX4 576 aa9.45□□□□□ -0.9
SPG11-207ENST00000558138 SLC22A12Q96S37 553 aa9.45□□□□□ -0.9
SPG11-207ENST00000558138 CDK5RAP1Q96SZ6 601 aaKnown RBP9.45□□□□□ -0.9
SPG11-207ENST00000558138 ULBP1Q9BZM6 244 aa9.45□□□□□ -0.9
SPG11-207ENST00000558138 C11orf16Q9NQ32 467 aa9.45□□□□□ -0.9
SPG11-207ENST00000558138 GKN1Q9NS71 199 aa9.45□□□□□ -0.9
SPG11-207ENST00000558138 CFAP97Q9P2B7 532 aa9.45□□□□□ -0.9
SPG11-207ENST00000558138 LIMA1Q9UHB6 759 aaKnown RBP9.45□□□□□ -0.9
SPG11-207ENST00000558138 LSM7Q9UK45 103 aaKnown RBP9.45□□□□□ -0.9
SPG11-207ENST00000558138 STRIP2Q9ULQ0 834 aa9.45□□□□□ -0.9
SPG11-207ENST00000558138 NDRG2Q9UN36 371 aaKnown RBP9.45□□□□□ -0.9
SPG11-207ENST00000558138 ARHGAP26Q9UNA1 814 aa9.45□□□□□ -0.9
SPG11-207ENST00000558138 SCML2Q9UQR0 700 aa9.45□□□□□ -0.9
SPG11-207ENST00000558138 FHOD1Q9Y613 1164 aa9.45□□□□□ -0.9
SPG11-207ENST00000558138 WNT6Q9Y6F9 365 aa9.45□□□□□ -0.9
SPG11-207ENST00000558138 DENND4CQ5VZ89 1909 aa9.44□□□□□ -0.9
SPG11-207ENST00000558138 BDP1A6H8Y1 2624 aa9.44□□□□□ -0.9
SPG11-207ENST00000558138 LGALS16A8MUM7 142 aa9.44□□□□□ -0.9
SPG11-207ENST00000558138 HHLA1C9JL84 531 aa9.44□□□□□ -0.9
SPG11-207ENST00000558138 TULP2O00295 520 aa9.44□□□□□ -0.9
SPG11-207ENST00000558138 SLC9A3R1O14745 358 aaPredicted RBP9.44□□□□□ -0.9
SPG11-207ENST00000558138 NCAM2O15394 837 aa9.44□□□□□ -0.9
SPG11-207ENST00000558138 COCHO43405 550 aa9.44□□□□□ -0.9
SPG11-207ENST00000558138 OAS1P00973 400 aaKnown RBP9.44□□□□□ -0.9
SPG11-207ENST00000558138 HMBSP08397 361 aa9.44□□□□□ -0.9
SPG11-207ENST00000558138 PNMA6AP0CW24 399 aaPredicted RBP9.44□□□□□ -0.9
SPG11-207ENST00000558138 UCHL3P15374 230 aa9.44□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms