RNA–Protein interactions for RNA: ENST00000558040.5

SNX1-203, Transcript of sorting nexin 1, humanhuman

TSL 5

Gene SNX1, Length 774 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-203ENST00000558040 PRRG1O14668 218 aa17.71■□□□□ 0.43
SNX1-203ENST00000558040 BUB1BO60566 1050 aaPredicted RBP17.71■□□□□ 0.43
SNX1-203ENST00000558040 RTN3O95197 1032 aaPredicted RBP17.71■□□□□ 0.43
SNX1-203ENST00000558040 GLI1P08151 1106 aa17.71■□□□□ 0.43
SNX1-203ENST00000558040 DNAJB1P25685 340 aa17.71■□□□□ 0.43
SNX1-203ENST00000558040 KLRC2P26717 231 aa17.71■□□□□ 0.43
SNX1-203ENST00000558040 DDR2Q16832 855 aa17.71■□□□□ 0.43
SNX1-203ENST00000558040 CHRDL2Q6WN34 429 aa17.71■□□□□ 0.43
SNX1-203ENST00000558040 ARCQ7LC44 396 aa17.71■□□□□ 0.43
SNX1-203ENST00000558040 FNIP1Q8TF40 1166 aa17.71■□□□□ 0.43
SNX1-203ENST00000558040 GOLGA1Q92805 767 aa17.71■□□□□ 0.43
SNX1-203ENST00000558040 TIFAQ96CG3 184 aa17.71■□□□□ 0.43
SNX1-203ENST00000558040 TRIM62Q9BVG3 475 aa17.71■□□□□ 0.43
SNX1-203ENST00000558040 CRISPLD1Q9H336 500 aa17.71■□□□□ 0.43
SNX1-203ENST00000558040 EHD2Q9NZN4 543 aa17.71■□□□□ 0.43
SNX1-203ENST00000558040 USP3Q9Y6I4 520 aa17.71■□□□□ 0.43
SNX1-203ENST00000558040 TNFRSF10BO14763 440 aa17.7■□□□□ 0.42
SNX1-203ENST00000558040 HSF2BPO75031 334 aa17.7■□□□□ 0.42
SNX1-203ENST00000558040 GJB6O95452 261 aa17.7■□□□□ 0.42
SNX1-203ENST00000558040 C1RP00736 705 aa17.7■□□□□ 0.42
SNX1-203ENST00000558040 CASQ1P31415 396 aa17.7■□□□□ 0.42
SNX1-203ENST00000558040 ALDH1A3P47895 512 aa17.7■□□□□ 0.42
SNX1-203ENST00000558040 GPR15P49685 360 aa17.7■□□□□ 0.42
SNX1-203ENST00000558040 DAOAP59103 153 aa17.7■□□□□ 0.42
SNX1-203ENST00000558040 RPL7AP62424 266 aaKnown RBP17.7■□□□□ 0.42
SNX1-203ENST00000558040 MLLT1Q03111 559 aaPredicted RBP17.7■□□□□ 0.42
SNX1-203ENST00000558040 PLD1Q13393 1074 aa17.7■□□□□ 0.42
SNX1-203ENST00000558040 MESDQ14696 234 aa17.7■□□□□ 0.42
SNX1-203ENST00000558040 DNTTIP2Q5QJE6 756 aaKnown RBP17.7■□□□□ 0.42
SNX1-203ENST00000558040 PM20D1Q6GTS8 502 aa17.7■□□□□ 0.42
SNX1-203ENST00000558040 SYT10Q6XYQ8 523 aa17.7■□□□□ 0.42
SNX1-203ENST00000558040 DENND5BQ6ZUT9 1274 aa17.7■□□□□ 0.42
SNX1-203ENST00000558040 TCEAL8Q8IYN2 117 aa17.7■□□□□ 0.42
SNX1-203ENST00000558040 LRRC57Q8N9N7 239 aa17.7■□□□□ 0.42
SNX1-203ENST00000558040 GADD45GIP1Q8TAE8 222 aaPredicted RBP17.7■□□□□ 0.42
SNX1-203ENST00000558040 CLEC4CQ8WTT0 213 aa17.7■□□□□ 0.42
SNX1-203ENST00000558040 ARNTL2Q8WYA1 636 aa17.7■□□□□ 0.42
SNX1-203ENST00000558040 FAM149B1Q96BN6 582 aa17.7■□□□□ 0.42
SNX1-203ENST00000558040 DNAI1Q9UI46 699 aa17.7■□□□□ 0.42
SNX1-203ENST00000558040 TMEM59LQ9UK28 342 aa17.7■□□□□ 0.42
SNX1-203ENST00000558040 JRKLQ9Y4A0 524 aa17.7■□□□□ 0.42
SNX1-203ENST00000558040 YIPF1Q9Y548 306 aa17.7■□□□□ 0.42
SNX1-203ENST00000558040 CTAGE9A4FU28 777 aa17.69■□□□□ 0.42
SNX1-203ENST00000558040 TMEM110-MUSTN1A8MSY1 372 aa17.69■□□□□ 0.42
SNX1-203ENST00000558040 TGM5O43548 720 aa17.69■□□□□ 0.42
SNX1-203ENST00000558040 SOAT2O75908 522 aa17.69■□□□□ 0.42
SNX1-203ENST00000558040 PROSCO94903 275 aa17.69■□□□□ 0.42
SNX1-203ENST00000558040 CSPG5O95196 566 aa17.69■□□□□ 0.42
SNX1-203ENST00000558040 SEC24AO95486 1093 aa17.69■□□□□ 0.42
SNX1-203ENST00000558040 GLUD1P00367 558 aa17.69■□□□□ 0.42
SNX1-203ENST00000558040 USP17L7P0C7H9 530 aa17.69■□□□□ 0.42
SNX1-203ENST00000558040 GPD1P21695 349 aa17.69■□□□□ 0.42
SNX1-203ENST00000558040 MAN1A1P33908 653 aa17.69■□□□□ 0.42
SNX1-203ENST00000558040 RFC1P35251 1148 aaPredicted RBP17.69■□□□□ 0.42
SNX1-203ENST00000558040 SLC1A1P43005 524 aa17.69■□□□□ 0.42
SNX1-203ENST00000558040 RNASE9P60153 205 aaKnown RBP17.69■□□□□ 0.42
SNX1-203ENST00000558040 PIGHQ14442 188 aaPredicted RBP17.69■□□□□ 0.42
SNX1-203ENST00000558040 VEPH1Q14D04 833 aa17.69■□□□□ 0.42
SNX1-203ENST00000558040 SDHAF4Q5VUM1 108 aa17.69■□□□□ 0.42
SNX1-203ENST00000558040 CCDC149Q6ZUS6 474 aa17.69■□□□□ 0.42
SNX1-203ENST00000558040 PEX26Q7Z412 305 aa17.69■□□□□ 0.42
SNX1-203ENST00000558040 SLFN11Q7Z7L1 901 aa17.69■□□□□ 0.42
SNX1-203ENST00000558040 ARHGAP18Q8N392 663 aa17.69■□□□□ 0.42
SNX1-203ENST00000558040 PIWIL1Q96J94 861 aaKnown RBP17.69■□□□□ 0.42
SNX1-203ENST00000558040 WDR24Q96S15 920 aa17.69■□□□□ 0.42
SNX1-203ENST00000558040 PRO3102Q9H379 93 aa17.69■□□□□ 0.42
SNX1-203ENST00000558040 CERS4Q9HA82 394 aa17.69■□□□□ 0.42
SNX1-203ENST00000558040 A0A1W2PPC1 479 aa17.68■□□□□ 0.42
SNX1-203ENST00000558040 HIDE1A8MVS5 230 aa17.68■□□□□ 0.42
SNX1-203ENST00000558040 DAB1O75553 588 aa17.68■□□□□ 0.42
SNX1-203ENST00000558040 GRAP2O75791 330 aa17.68■□□□□ 0.42
SNX1-203ENST00000558040 PDGFRAP16234 1089 aa17.68■□□□□ 0.42
SNX1-203ENST00000558040 ATF6P18850 670 aa17.68■□□□□ 0.42
SNX1-203ENST00000558040 PSMA2P25787 234 aa17.68■□□□□ 0.42
SNX1-203ENST00000558040 YWHAQP27348 245 aa17.68■□□□□ 0.42
SNX1-203ENST00000558040 YWHAZP63104 245 aaKnown RBP17.68■□□□□ 0.42
SNX1-203ENST00000558040 IFRD2Q12894 506 aaPredicted RBP17.68■□□□□ 0.42
SNX1-203ENST00000558040 CAMK1Q14012 370 aa17.68■□□□□ 0.42
SNX1-203ENST00000558040 ACAP1Q15027 740 aa17.68■□□□□ 0.42
SNX1-203ENST00000558040 RTL10Q7L3V2 364 aa17.68■□□□□ 0.42
SNX1-203ENST00000558040 NIPA2Q8N8Q9 360 aa17.68■□□□□ 0.42
SNX1-203ENST00000558040 KIF18AQ8NI77 898 aa17.68■□□□□ 0.42
SNX1-203ENST00000558040 JOSD2Q8TAC2 188 aa17.68■□□□□ 0.42
SNX1-203ENST00000558040 SCAMP5Q8TAC9 235 aa17.68■□□□□ 0.42
SNX1-203ENST00000558040 BTBD6Q96KE9 485 aa17.68■□□□□ 0.42
SNX1-203ENST00000558040 NAPGQ99747 312 aaPredicted RBP17.68■□□□□ 0.42
SNX1-203ENST00000558040 TRIM7Q9C029 511 aa17.68■□□□□ 0.42
SNX1-203ENST00000558040 POPDC2Q9HBU9 364 aa17.68■□□□□ 0.42
SNX1-203ENST00000558040 IL37Q9NZH6 218 aa17.68■□□□□ 0.42
SNX1-203ENST00000558040 FBXW11Q9UKB1 542 aa17.68■□□□□ 0.42
SNX1-203ENST00000558040 AMFRQ9UKV5 643 aa17.68■□□□□ 0.42
SNX1-203ENST00000558040 SCML2Q9UQR0 700 aa17.68■□□□□ 0.42
SNX1-203ENST00000558040 INSL5Q9Y5Q6 135 aa17.68■□□□□ 0.42
SNX1-203ENST00000558040 C2CD4BA6NLJ0 364 aa17.67■□□□□ 0.42
SNX1-203ENST00000558040 SLC38A8A6NNN8 435 aa17.67■□□□□ 0.42
SNX1-203ENST00000558040 DPYSL4O14531 572 aa17.67■□□□□ 0.42
SNX1-203ENST00000558040 CAPN9O14815 690 aa17.67■□□□□ 0.42
SNX1-203ENST00000558040 SPOPO43791 374 aa17.67■□□□□ 0.42
SNX1-203ENST00000558040 FTCDO95954 541 aa17.67■□□□□ 0.42
SNX1-203ENST00000558040 LTFP02788 710 aa17.67■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms