RNA–Protein interactions for RNA: ENST00000557740.5

SHMT2-235, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 4

Gene SHMT2, Length 569 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-235ENST00000557740 HMGXB4Q9UGU5 601 aa15.52■□□□□ 0.08
SHMT2-235ENST00000557740 TRAF3IP3Q9Y228 551 aa15.52■□□□□ 0.08
SHMT2-235ENST00000557740 COCHO43405 550 aa15.51■□□□□ 0.07
SHMT2-235ENST00000557740 RHOBTB3O94955 611 aa15.51■□□□□ 0.07
SHMT2-235ENST00000557740 EPN2O95208 641 aa15.51■□□□□ 0.07
SHMT2-235ENST00000557740 ASS1P00966 412 aaKnown RBP15.51■□□□□ 0.07
SHMT2-235ENST00000557740 HLA-DRAP01903 254 aa15.51■□□□□ 0.07
SHMT2-235ENST00000557740 KRT13P13646 458 aa15.51■□□□□ 0.07
SHMT2-235ENST00000557740 ASPAP45381 313 aa15.51■□□□□ 0.07
SHMT2-235ENST00000557740 VAMP7P51809 220 aa15.51■□□□□ 0.07
SHMT2-235ENST00000557740 NDST1P52848 882 aa15.51■□□□□ 0.07
SHMT2-235ENST00000557740 DHCR24Q15392 516 aa15.51■□□□□ 0.07
SHMT2-235ENST00000557740 HECTD3Q5T447 861 aa15.51■□□□□ 0.07
SHMT2-235ENST00000557740 INTS8Q75QN2 995 aaKnown RBP15.51■□□□□ 0.07
SHMT2-235ENST00000557740 UNC93AQ86WB7 457 aa15.51■□□□□ 0.07
SHMT2-235ENST00000557740 FUKQ8N0W3 1084 aa15.51■□□□□ 0.07
SHMT2-235ENST00000557740 SLC2A14Q8TDB8 520 aa15.51■□□□□ 0.07
SHMT2-235ENST00000557740 FAM49BQ9NUQ9 324 aa15.51■□□□□ 0.07
SHMT2-235ENST00000557740 COMMD8Q9NX08 183 aa15.51■□□□□ 0.07
SHMT2-235ENST00000557740 GMIPQ9P107 970 aa15.51■□□□□ 0.07
SHMT2-235ENST00000557740 TBC1D14Q9P2M4 693 aa15.51■□□□□ 0.07
SHMT2-235ENST00000557740 ZDHHC9Q9Y397 364 aa15.51■□□□□ 0.07
SHMT2-235ENST00000557740 GREB1Q4ZG55 1949 aa15.51■□□□□ 0.07
SHMT2-235ENST00000557740 ANAPC1Q9H1A4 1944 aa15.51■□□□□ 0.07
SHMT2-235ENST00000557740 FAM237AA0A1B0GTK4 181 aa15.5■□□□□ 0.07
SHMT2-235ENST00000557740 A0A1W2PQ27 194 aa15.5■□□□□ 0.07
SHMT2-235ENST00000557740 A0A1W2PQ64 194 aa15.5■□□□□ 0.07
SHMT2-235ENST00000557740 A0A1W2PQD8 194 aa15.5■□□□□ 0.07
SHMT2-235ENST00000557740 E2F8A0AVK6 867 aa15.5■□□□□ 0.07
SHMT2-235ENST00000557740 DCDC2BA2VCK2 349 aa15.5■□□□□ 0.07
SHMT2-235ENST00000557740 TNFRSF10BO14763 440 aa15.5■□□□□ 0.07
SHMT2-235ENST00000557740 SLC30A4O14863 429 aa15.5■□□□□ 0.07
SHMT2-235ENST00000557740 MAPK13O15264 365 aa15.5■□□□□ 0.07
SHMT2-235ENST00000557740 ADH5P11766 374 aa15.5■□□□□ 0.07
SHMT2-235ENST00000557740 RPL13P26373 211 aaKnown RBP15.5■□□□□ 0.07
SHMT2-235ENST00000557740 TUBP50607 506 aa15.5■□□□□ 0.07
SHMT2-235ENST00000557740 DPYDQ12882 1025 aa15.5■□□□□ 0.07
SHMT2-235ENST00000557740 ELF2Q15723 593 aa15.5■□□□□ 0.07
SHMT2-235ENST00000557740 AASDHQ4L235 1098 aaPredicted RBP15.5■□□□□ 0.07
SHMT2-235ENST00000557740 C2orf27AQ580R0 203 aa15.5■□□□□ 0.07
SHMT2-235ENST00000557740 SPOPLQ6IQ16 392 aa15.5■□□□□ 0.07
SHMT2-235ENST00000557740 KRBA2Q6ZNG9 492 aa15.5■□□□□ 0.07
SHMT2-235ENST00000557740 PAQR9Q6ZVX9 377 aa15.5■□□□□ 0.07
SHMT2-235ENST00000557740 FAM186BQ8IYM0 893 aa15.5■□□□□ 0.07
SHMT2-235ENST00000557740 C12orf50Q8NA57 414 aaPredicted RBP15.5■□□□□ 0.07
SHMT2-235ENST00000557740 CCDC150Q8NCX0 1101 aa15.5■□□□□ 0.07
SHMT2-235ENST00000557740 USP33Q8TEY7 942 aa15.5■□□□□ 0.07
SHMT2-235ENST00000557740 CCDC34Q96HJ3 373 aa15.5■□□□□ 0.07
SHMT2-235ENST00000557740 ARRDC1-AS1Q9H2J1 176 aa15.5■□□□□ 0.07
SHMT2-235ENST00000557740 FBXO44Q9H4M3 255 aa15.5■□□□□ 0.07
SHMT2-235ENST00000557740 CCSER2Q9H7U1 834 aa15.5■□□□□ 0.07
SHMT2-235ENST00000557740 UTP3Q9NQZ2 479 aaKnown RBP eCLIP15.5■□□□□ 0.07
SHMT2-235ENST00000557740 CHORDC1Q9UHD1 332 aaPredicted RBP15.5■□□□□ 0.07
SHMT2-235ENST00000557740 MAPK8IP1Q9UQF2 711 aa15.5■□□□□ 0.07
SHMT2-235ENST00000557740 SH3BP1Q9Y3L3 701 aa15.5■□□□□ 0.07
SHMT2-235ENST00000557740 HELZP42694 1942 aaKnown RBP15.5■□□□□ 0.07
SHMT2-235ENST00000557740 PALM2-AKAP2B1ALY0 433 aaPredicted RBP15.49■□□□□ 0.07
SHMT2-235ENST00000557740 APODP05090 189 aa15.49■□□□□ 0.07
SHMT2-235ENST00000557740 FAM200BP0CF97 657 aa15.49■□□□□ 0.07
SHMT2-235ENST00000557740 TRIM49P0CI25 452 aa15.49■□□□□ 0.07
SHMT2-235ENST00000557740 TRIM49CP0CI26 452 aa15.49■□□□□ 0.07
SHMT2-235ENST00000557740 ADORA2BP29275 332 aa15.49■□□□□ 0.07
SHMT2-235ENST00000557740 EIF2DP41214 584 aaKnown RBP15.49■□□□□ 0.07
SHMT2-235ENST00000557740 GCLMP48507 274 aa15.49■□□□□ 0.07
SHMT2-235ENST00000557740 DGKEP52429 567 aa15.49■□□□□ 0.07
SHMT2-235ENST00000557740 MAP3K7CLP57077 242 aa15.49■□□□□ 0.07
SHMT2-235ENST00000557740 KDSRQ06136 332 aa15.49■□□□□ 0.07
SHMT2-235ENST00000557740 NFIL3Q16649 462 aa15.49■□□□□ 0.07
SHMT2-235ENST00000557740 GAB4Q2WGN9 574 aa15.49■□□□□ 0.07
SHMT2-235ENST00000557740 C1orf220Q5T0J3 134 aa15.49■□□□□ 0.07
SHMT2-235ENST00000557740 ADGRG2Q8IZP9 1017 aa15.49■□□□□ 0.07
SHMT2-235ENST00000557740 CRYBG2Q8N1P7 616 aa15.49■□□□□ 0.07
SHMT2-235ENST00000557740 GUF1Q8N442 669 aaKnown RBP15.49■□□□□ 0.07
SHMT2-235ENST00000557740 OTUB2Q96DC9 234 aa15.49■□□□□ 0.07
SHMT2-235ENST00000557740 PNKPQ96T60 521 aa15.49■□□□□ 0.07
SHMT2-235ENST00000557740 SMOQ99835 787 aa15.49■□□□□ 0.07
SHMT2-235ENST00000557740 DNAI2Q9GZS0 605 aa15.49■□□□□ 0.07
SHMT2-235ENST00000557740 NIF3L1Q9GZT8 377 aa15.49■□□□□ 0.07
SHMT2-235ENST00000557740 GOLPH3LQ9H4A5 285 aa15.49■□□□□ 0.07
SHMT2-235ENST00000557740 MMRN2Q9H8L6 949 aa15.49■□□□□ 0.07
SHMT2-235ENST00000557740 IL37Q9NZH6 218 aa15.49■□□□□ 0.07
SHMT2-235ENST00000557740 EBF1Q9UH73 591 aa15.49■□□□□ 0.07
SHMT2-235ENST00000557740 PCDHGA5Q9Y5G8 931 aa15.49■□□□□ 0.07
SHMT2-235ENST00000557740 SDK1Q7Z5N4 2213 aa15.49■□□□□ 0.07
SHMT2-235ENST00000557740 FAM92AA1XBS5 289 aa15.48■□□□□ 0.07
SHMT2-235ENST00000557740 K7EQS6 105 aa15.48■□□□□ 0.07
SHMT2-235ENST00000557740 KAT7O95251 611 aa15.48■□□□□ 0.07
SHMT2-235ENST00000557740 IRF1P10914 325 aa15.48■□□□□ 0.07
SHMT2-235ENST00000557740 PSMC2P35998 433 aaKnown RBP15.48■□□□□ 0.07
SHMT2-235ENST00000557740 SF3A2Q15428 464 aaKnown RBP15.48■□□□□ 0.07
SHMT2-235ENST00000557740 CCDC6Q16204 474 aa15.48■□□□□ 0.07
SHMT2-235ENST00000557740 PLK5Q496M5 336 aa15.48■□□□□ 0.07
SHMT2-235ENST00000557740 LY6G5CQ5SRR4 150 aa15.48■□□□□ 0.07
SHMT2-235ENST00000557740 SNX30Q5VWJ9 437 aa15.48■□□□□ 0.07
SHMT2-235ENST00000557740 BTBD8Q5XKL5 378 aa15.48■□□□□ 0.07
SHMT2-235ENST00000557740 RHBDF2Q6PJF5 856 aa15.48■□□□□ 0.07
SHMT2-235ENST00000557740 CCDC33Q8N5R6 958 aa15.48■□□□□ 0.07
SHMT2-235ENST00000557740 ZMIZ2Q8NF64 920 aa15.48■□□□□ 0.07
SHMT2-235ENST00000557740 JAKMIP2Q96AA8 810 aa15.48■□□□□ 0.07
SHMT2-235ENST00000557740 ZC3H10Q96K80 434 aaKnown RBP15.48■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms