RNA–Protein interactions for RNA: ENST00000557336.1

HNRNPC-231, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), humanhuman

TSL 3

Gene HNRNPC, Length 580 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPC-231ENST00000557336 RHBDF2Q6PJF5 856 aa11.9□□□□□ -0.5
HNRNPC-231ENST00000557336 UNC13DQ70J99 1090 aa11.9□□□□□ -0.5
HNRNPC-231ENST00000557336 C12orf56Q8IXR9 622 aa11.9□□□□□ -0.5
HNRNPC-231ENST00000557336 IQUBQ8NA54 791 aa11.9□□□□□ -0.5
HNRNPC-231ENST00000557336 TCEAL3Q969E4 200 aa11.9□□□□□ -0.5
HNRNPC-231ENST00000557336 TRPM5Q9NZQ8 1165 aa11.9□□□□□ -0.5
HNRNPC-231ENST00000557336 SPEGQ15772 3267 aa11.9□□□□□ -0.5
HNRNPC-231ENST00000557336 MYO16Q9Y6X6 1858 aa11.89□□□□□ -0.51
HNRNPC-231ENST00000557336 TNFRSF10BO14763 440 aa11.89□□□□□ -0.51
HNRNPC-231ENST00000557336 POLR2DO15514 142 aaKnown RBP11.89□□□□□ -0.51
HNRNPC-231ENST00000557336 KLRC4O43908 158 aa11.89□□□□□ -0.51
HNRNPC-231ENST00000557336 FOXD2O60548 495 aaPredicted RBP11.89□□□□□ -0.51
HNRNPC-231ENST00000557336 VNN1O95497 513 aa11.89□□□□□ -0.51
HNRNPC-231ENST00000557336 APBB3O95704 486 aa11.89□□□□□ -0.51
HNRNPC-231ENST00000557336 CCDC192P0DO97 292 aa11.89□□□□□ -0.51
HNRNPC-231ENST00000557336 PFKLP17858 780 aa11.89□□□□□ -0.51
HNRNPC-231ENST00000557336 TNNI1P19237 187 aa11.89□□□□□ -0.51
HNRNPC-231ENST00000557336 PGFP49763 221 aa11.89□□□□□ -0.51
HNRNPC-231ENST00000557336 CDH8P55286 799 aa11.89□□□□□ -0.51
HNRNPC-231ENST00000557336 CLDN10P78369 228 aa11.89□□□□□ -0.51
HNRNPC-231ENST00000557336 CUL4BQ13620 913 aa11.89□□□□□ -0.51
HNRNPC-231ENST00000557336 WDR72Q3MJ13 1102 aa11.89□□□□□ -0.51
HNRNPC-231ENST00000557336 FOXD4L5Q5VV16 416 aaPredicted RBP11.89□□□□□ -0.51
HNRNPC-231ENST00000557336 TDRD10Q5VZ19 366 aaKnown RBP11.89□□□□□ -0.51
HNRNPC-231ENST00000557336 STXBP4Q6ZWJ1 553 aa11.89□□□□□ -0.51
HNRNPC-231ENST00000557336 FILIP1Q7Z7B0 1213 aa11.89□□□□□ -0.51
HNRNPC-231ENST00000557336 RASSF3Q86WH2 238 aa11.89□□□□□ -0.51
HNRNPC-231ENST00000557336 C12orf40Q86WS4 652 aa11.89□□□□□ -0.51
HNRNPC-231ENST00000557336 GRAMD1CQ8IYS0 662 aa11.89□□□□□ -0.51
HNRNPC-231ENST00000557336 FSIP1Q8NA03 581 aa11.89□□□□□ -0.51
HNRNPC-231ENST00000557336 XXYLT1Q8NBI6 393 aa11.89□□□□□ -0.51
HNRNPC-231ENST00000557336 OR6B3Q8NGW1 331 aa11.89□□□□□ -0.51
HNRNPC-231ENST00000557336 FOXD4L4Q8WXT5 416 aaPredicted RBP11.89□□□□□ -0.51
HNRNPC-231ENST00000557336 WBP2Q969T9 261 aa11.89□□□□□ -0.51
HNRNPC-231ENST00000557336 KCNK16Q96T55 309 aa11.89□□□□□ -0.51
HNRNPC-231ENST00000557336 LRRC27Q9C0I9 530 aa11.89□□□□□ -0.51
HNRNPC-231ENST00000557336 SDCBP2Q9H190 292 aa11.89□□□□□ -0.51
HNRNPC-231ENST00000557336 SMYD3Q9H7B4 428 aa11.89□□□□□ -0.51
HNRNPC-231ENST00000557336 SLC39A2Q9NP94 309 aa11.89□□□□□ -0.51
HNRNPC-231ENST00000557336 DMAC2Q9NW81 257 aa11.89□□□□□ -0.51
HNRNPC-231ENST00000557336 SMPD4Q9NXE4 827 aa11.89□□□□□ -0.51
HNRNPC-231ENST00000557336 IL37Q9NZH6 218 aa11.89□□□□□ -0.51
HNRNPC-231ENST00000557336 PCDHA7Q9UN72 937 aa11.89□□□□□ -0.51
HNRNPC-231ENST00000557336 INVSQ9Y283 1065 aa11.89□□□□□ -0.51
HNRNPC-231ENST00000557336 PCDHGA5Q9Y5G8 931 aa11.89□□□□□ -0.51
HNRNPC-231ENST00000557336 CPQQ9Y646 472 aa11.89□□□□□ -0.51
HNRNPC-231ENST00000557336 WDFY3Q8IZQ1 3526 aa11.89□□□□□ -0.51
HNRNPC-231ENST00000557336 IGF2RP11717 2491 aa11.88□□□□□ -0.51
HNRNPC-231ENST00000557336 KIAA1549LQ6ZVL6 1849 aa11.88□□□□□ -0.51
HNRNPC-231ENST00000557336 C4BPAP04003 597 aaKnown RBP11.88□□□□□ -0.51
HNRNPC-231ENST00000557336 MPLP40238 635 aa11.88□□□□□ -0.51
HNRNPC-231ENST00000557336 SNRPFP62306 86 aaKnown RBP11.88□□□□□ -0.51
HNRNPC-231ENST00000557336 AMPD3Q01432 767 aa11.88□□□□□ -0.51
HNRNPC-231ENST00000557336 PKP1Q13835 747 aa11.88□□□□□ -0.51
HNRNPC-231ENST00000557336 DHCR24Q15392 516 aa11.88□□□□□ -0.51
HNRNPC-231ENST00000557336 FOXD4L6Q3SYB3 417 aaPredicted RBP11.88□□□□□ -0.51
HNRNPC-231ENST00000557336 C2orf27AQ580R0 203 aa11.88□□□□□ -0.51
HNRNPC-231ENST00000557336 N4BP2L1Q5TBK1 243 aaPredicted RBP11.88□□□□□ -0.51
HNRNPC-231ENST00000557336 STPG1Q5TH74 334 aa11.88□□□□□ -0.51
HNRNPC-231ENST00000557336 EMC10Q5UCC4 262 aa11.88□□□□□ -0.51
HNRNPC-231ENST00000557336 RESP18Q5W5W9 173 aa11.88□□□□□ -0.51
HNRNPC-231ENST00000557336 FOXD4L3Q6VB84 417 aaPredicted RBP11.88□□□□□ -0.51
HNRNPC-231ENST00000557336 HS2ST1Q7LGA3 356 aa11.88□□□□□ -0.51
HNRNPC-231ENST00000557336 PHTF2Q8N3S3 785 aa11.88□□□□□ -0.51
HNRNPC-231ENST00000557336 KIAA1958Q8N8K9 716 aa11.88□□□□□ -0.51
HNRNPC-231ENST00000557336 B3GALNT2Q8NCR0 500 aa11.88□□□□□ -0.51
HNRNPC-231ENST00000557336 ANKK1Q8NFD2 765 aa11.88□□□□□ -0.51
HNRNPC-231ENST00000557336 SCAMP5Q8TAC9 235 aa11.88□□□□□ -0.51
HNRNPC-231ENST00000557336 PARD3BQ8TEW8 1205 aa11.88□□□□□ -0.51
HNRNPC-231ENST00000557336 ZNF396Q96N95 335 aaPredicted RBP11.88□□□□□ -0.51
HNRNPC-231ENST00000557336 SNX25Q9H3E2 840 aa11.88□□□□□ -0.51
HNRNPC-231ENST00000557336 VRTNQ9H8Y1 702 aa11.88□□□□□ -0.51
HNRNPC-231ENST00000557336 NXF1Q9UBU9 619 aaKnown RBP11.88□□□□□ -0.51
HNRNPC-231ENST00000557336 GON4LQ3T8J9 2241 aa11.88□□□□□ -0.51
HNRNPC-231ENST00000557336 UBE4BO95155 1302 aa11.87□□□□□ -0.51
HNRNPC-231ENST00000557336 A0A0A0MRY4 1105 aa11.87□□□□□ -0.51
HNRNPC-231ENST00000557336 PVALEFA0A1B0GWK0 134 aa11.87□□□□□ -0.51
HNRNPC-231ENST00000557336 FAM92AA1XBS5 289 aa11.87□□□□□ -0.51
HNRNPC-231ENST00000557336 BCLAF3A2AJT9 711 aaKnown RBP11.87□□□□□ -0.51
HNRNPC-231ENST00000557336 LRRIQ3A6PVS8 624 aaPredicted RBP11.87□□□□□ -0.51
HNRNPC-231ENST00000557336 A8MXQ7 604 aa11.87□□□□□ -0.51
HNRNPC-231ENST00000557336 TRIM66O15016 1216 aa11.87□□□□□ -0.51
HNRNPC-231ENST00000557336 COCHO43405 550 aa11.87□□□□□ -0.51
HNRNPC-231ENST00000557336 NFATC1O95644 943 aa11.87□□□□□ -0.51
HNRNPC-231ENST00000557336 BCKDHBP21953 392 aa11.87□□□□□ -0.51
HNRNPC-231ENST00000557336 PMLP29590 882 aa11.87□□□□□ -0.51
HNRNPC-231ENST00000557336 KIR2DL1P43626 348 aaPredicted RBP11.87□□□□□ -0.51
HNRNPC-231ENST00000557336 PPP3CCP48454 512 aa11.87□□□□□ -0.51
HNRNPC-231ENST00000557336 SEC13P55735 322 aa11.87□□□□□ -0.51
HNRNPC-231ENST00000557336 DLG4P78352 724 aa11.87□□□□□ -0.51
HNRNPC-231ENST00000557336 STK4Q13043 487 aa11.87□□□□□ -0.51
HNRNPC-231ENST00000557336 NR1H3Q13133 447 aa11.87□□□□□ -0.51
HNRNPC-231ENST00000557336 PSMD2Q13200 908 aa11.87□□□□□ -0.51
HNRNPC-231ENST00000557336 KNOP1Q1ED39 458 aaKnown RBP11.87□□□□□ -0.51
HNRNPC-231ENST00000557336 AASDHQ4L235 1098 aaPredicted RBP11.87□□□□□ -0.51
HNRNPC-231ENST00000557336 C1orf220Q5T0J3 134 aa11.87□□□□□ -0.51
HNRNPC-231ENST00000557336 SWT1Q5T5J6 900 aaKnown RBP11.87□□□□□ -0.51
HNRNPC-231ENST00000557336 METTL3Q86U44 580 aaKnown RBP11.87□□□□□ -0.51
HNRNPC-231ENST00000557336 CCDC33Q8N5R6 958 aa11.87□□□□□ -0.51
HNRNPC-231ENST00000557336 KIAA0895Q8NCT3 520 aa11.87□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms