RNA–Protein interactions for RNA: ENST00000556771.5

MTHFD1-214, Transcript of methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1, humanhuman

TSL 2

Gene MTHFD1, Length 813 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFD1-214ENST00000556771 C11orf16Q9NQ32 467 aa11.15□□□□□ -0.62
MTHFD1-214ENST00000556771 TLR8Q9NR97 1041 aaKnown RBP11.15□□□□□ -0.62
MTHFD1-214ENST00000556771 LIMA1Q9UHB6 759 aaKnown RBP11.15□□□□□ -0.62
MTHFD1-214ENST00000556771 TSPAN16Q9UKR8 245 aa11.15□□□□□ -0.62
MTHFD1-214ENST00000556771 LRRC10BA6NIK2 292 aa11.14□□□□□ -0.63
MTHFD1-214ENST00000556771 LGALS16A8MUM7 142 aa11.14□□□□□ -0.63
MTHFD1-214ENST00000556771 PRAMEF12O95522 483 aa11.14□□□□□ -0.63
MTHFD1-214ENST00000556771 OLFM2O95897 454 aa11.14□□□□□ -0.63
MTHFD1-214ENST00000556771 OAS1P00973 400 aaKnown RBP11.14□□□□□ -0.63
MTHFD1-214ENST00000556771 CFHP08603 1231 aa11.14□□□□□ -0.63
MTHFD1-214ENST00000556771 ZDHHC11BP0C7U3 371 aa11.14□□□□□ -0.63
MTHFD1-214ENST00000556771 GLULP15104 373 aa11.14□□□□□ -0.63
MTHFD1-214ENST00000556771 PLA2G4AP47712 749 aa11.14□□□□□ -0.63
MTHFD1-214ENST00000556771 KIF11P52732 1056 aa11.14□□□□□ -0.63
MTHFD1-214ENST00000556771 MLLT6P55198 1093 aaPredicted RBP11.14□□□□□ -0.63
MTHFD1-214ENST00000556771 SLC7A9P82251 487 aa11.14□□□□□ -0.63
MTHFD1-214ENST00000556771 PRKCQQ04759 706 aa11.14□□□□□ -0.63
MTHFD1-214ENST00000556771 IFRD2Q12894 506 aaPredicted RBP11.14□□□□□ -0.63
MTHFD1-214ENST00000556771 HECTD3Q5T447 861 aa11.14□□□□□ -0.63
MTHFD1-214ENST00000556771 IER5LQ5T953 404 aa11.14□□□□□ -0.63
MTHFD1-214ENST00000556771 C1orf228Q6PIY5 440 aa11.14□□□□□ -0.63
MTHFD1-214ENST00000556771 DDX42Q86XP3 938 aaKnown RBP eCLIP11.14□□□□□ -0.63
MTHFD1-214ENST00000556771 SUGP1Q8IWZ8 645 aaKnown RBP11.14□□□□□ -0.63
MTHFD1-214ENST00000556771 ARHGAP18Q8N392 663 aa11.14□□□□□ -0.63
MTHFD1-214ENST00000556771 USP13Q92995 863 aaPredicted RBP11.14□□□□□ -0.63
MTHFD1-214ENST00000556771 PBXIP1Q96AQ6 731 aa11.14□□□□□ -0.63
MTHFD1-214ENST00000556771 MSANTD3Q96H12 275 aa11.14□□□□□ -0.63
MTHFD1-214ENST00000556771 CDK5RAP1Q96SZ6 601 aaKnown RBP11.14□□□□□ -0.63
MTHFD1-214ENST00000556771 PLA2G2FQ9BZM2 168 aa11.14□□□□□ -0.63
MTHFD1-214ENST00000556771 VPS16Q9H269 839 aa11.14□□□□□ -0.63
MTHFD1-214ENST00000556771 MFSD1Q9H3U5 465 aa11.14□□□□□ -0.63
MTHFD1-214ENST00000556771 SMOC2Q9H3U7 446 aa11.14□□□□□ -0.63
MTHFD1-214ENST00000556771 SIX2Q9NPC8 291 aa11.14□□□□□ -0.63
MTHFD1-214ENST00000556771 PLCB1Q9NQ66 1216 aa11.14□□□□□ -0.63
MTHFD1-214ENST00000556771 ARHGEF3Q9NR81 526 aa11.14□□□□□ -0.63
MTHFD1-214ENST00000556771 TAB2Q9NYJ8 693 aa11.14□□□□□ -0.63
MTHFD1-214ENST00000556771 ARHGAP26Q9UNA1 814 aa11.14□□□□□ -0.63
MTHFD1-214ENST00000556771 WDR3Q9UNX4 943 aaKnown RBP eCLIP11.14□□□□□ -0.63
MTHFD1-214ENST00000556771 USP3Q9Y6I4 520 aa11.14□□□□□ -0.63
MTHFD1-214ENST00000556771 SYCE3A1L190 88 aa11.13□□□□□ -0.63
MTHFD1-214ENST00000556771 C2orf78A6NCI8 922 aa11.13□□□□□ -0.63
MTHFD1-214ENST00000556771 FAM86C2PA6NEL3 165 aa11.13□□□□□ -0.63
MTHFD1-214ENST00000556771 BECN2A8MW95 431 aa11.13□□□□□ -0.63
MTHFD1-214ENST00000556771 RNF225M0QZC1 329 aaPredicted RBP11.13□□□□□ -0.63
MTHFD1-214ENST00000556771 ABL1P00519 1130 aa11.13□□□□□ -0.63
MTHFD1-214ENST00000556771 BRD2P25440 801 aaKnown RBP11.13□□□□□ -0.63
MTHFD1-214ENST00000556771 GDI1P31150 447 aa11.13□□□□□ -0.63
MTHFD1-214ENST00000556771 COPB1P53618 953 aaKnown RBP11.13□□□□□ -0.63
MTHFD1-214ENST00000556771 BPIFB4P59827 614 aa11.13□□□□□ -0.63
MTHFD1-214ENST00000556771 TPM4P67936 248 aa11.13□□□□□ -0.63
MTHFD1-214ENST00000556771 PTK2Q05397 1052 aa11.13□□□□□ -0.63
MTHFD1-214ENST00000556771 PDE4CQ08493 712 aa11.13□□□□□ -0.63
MTHFD1-214ENST00000556771 USP4Q13107 963 aa11.13□□□□□ -0.63
MTHFD1-214ENST00000556771 GRM2Q14416 872 aa11.13□□□□□ -0.63
MTHFD1-214ENST00000556771 ARHGAP44Q17R89 818 aa11.13□□□□□ -0.63
MTHFD1-214ENST00000556771 PKDCCQ504Y2 493 aa11.13□□□□□ -0.63
MTHFD1-214ENST00000556771 RAB41Q5JT25 222 aa11.13□□□□□ -0.63
MTHFD1-214ENST00000556771 KLHDC7AQ5VTJ3 777 aa11.13□□□□□ -0.63
MTHFD1-214ENST00000556771 CC2D1AQ6P1N0 951 aaPredicted RBP11.13□□□□□ -0.63
MTHFD1-214ENST00000556771 HFE2Q6ZVN8 426 aa11.13□□□□□ -0.63
MTHFD1-214ENST00000556771 TADA2BQ86TJ2 420 aa11.13□□□□□ -0.63
MTHFD1-214ENST00000556771 PIGZQ86VD9 579 aa11.13□□□□□ -0.63
MTHFD1-214ENST00000556771 TTC30AQ86WT1 665 aa11.13□□□□□ -0.63
MTHFD1-214ENST00000556771 SIX5Q8N196 739 aa11.13□□□□□ -0.63
MTHFD1-214ENST00000556771 SCML4Q8N228 414 aa11.13□□□□□ -0.63
MTHFD1-214ENST00000556771 FBXL6Q8N531 539 aa11.13□□□□□ -0.63
MTHFD1-214ENST00000556771 ZNF276Q8N554 614 aa11.13□□□□□ -0.63
MTHFD1-214ENST00000556771 ARL14EPQ8N8R7 260 aaPredicted RBP11.13□□□□□ -0.63
MTHFD1-214ENST00000556771 ST13P5Q8NFI4 369 aaPredicted RBP11.13□□□□□ -0.63
MTHFD1-214ENST00000556771 KCTD13Q8WZ19 329 aa11.13□□□□□ -0.63
MTHFD1-214ENST00000556771 TFAP2BQ92481 460 aa11.13□□□□□ -0.63
MTHFD1-214ENST00000556771 LRFN3Q9BTN0 628 aa11.13□□□□□ -0.63
MTHFD1-214ENST00000556771 OCEL1Q9H607 264 aa11.13□□□□□ -0.63
MTHFD1-214ENST00000556771 LRRC4Q9HBW1 653 aa11.13□□□□□ -0.63
MTHFD1-214ENST00000556771 CYLDQ9NQC7 956 aa11.13□□□□□ -0.63
MTHFD1-214ENST00000556771 GMIPQ9P107 970 aa11.13□□□□□ -0.63
MTHFD1-214ENST00000556771 DNAJC12Q9UKB3 198 aa11.13□□□□□ -0.63
MTHFD1-214ENST00000556771 HELZP42694 1942 aaKnown RBP11.12□□□□□ -0.63
MTHFD1-214ENST00000556771 M0QYV0 167 aa11.12□□□□□ -0.63
MTHFD1-214ENST00000556771 TLR5O60602 858 aa11.12□□□□□ -0.63
MTHFD1-214ENST00000556771 UCHL3P15374 230 aa11.12□□□□□ -0.63
MTHFD1-214ENST00000556771 GNA15P30679 374 aa11.12□□□□□ -0.63
MTHFD1-214ENST00000556771 CLCN5P51795 746 aa11.12□□□□□ -0.63
MTHFD1-214ENST00000556771 STARD6P59095 220 aa11.12□□□□□ -0.63
MTHFD1-214ENST00000556771 KCNMA1Q12791 1236 aa11.12□□□□□ -0.63
MTHFD1-214ENST00000556771 PDGFRLQ15198 375 aa11.12□□□□□ -0.63
MTHFD1-214ENST00000556771 MLF2Q15773 248 aaPredicted RBP11.12□□□□□ -0.63
MTHFD1-214ENST00000556771 ZSCAN23Q3MJ62 389 aa11.12□□□□□ -0.63
MTHFD1-214ENST00000556771 SLC44A4Q53GD3 710 aa11.12□□□□□ -0.63
MTHFD1-214ENST00000556771 PM20D1Q6GTS8 502 aa11.12□□□□□ -0.63
MTHFD1-214ENST00000556771 GJB7Q6PEY0 223 aa11.12□□□□□ -0.63
MTHFD1-214ENST00000556771 KLHDC10Q6PID8 442 aa11.12□□□□□ -0.63
MTHFD1-214ENST00000556771 GPRIN1Q7Z2K8 1008 aa11.12□□□□□ -0.63
MTHFD1-214ENST00000556771 DHX40Q8IX18 779 aaKnown RBP11.12□□□□□ -0.63
MTHFD1-214ENST00000556771 CSGALNACT1Q8TDX6 532 aa11.12□□□□□ -0.63
MTHFD1-214ENST00000556771 RSPRY1Q96DX4 576 aa11.12□□□□□ -0.63
MTHFD1-214ENST00000556771 HSFY1Q96LI6 401 aa11.12□□□□□ -0.63
MTHFD1-214ENST00000556771 NELL2Q99435 816 aa11.12□□□□□ -0.63
MTHFD1-214ENST00000556771 LSM14BQ9BX40 385 aaKnown RBP11.12□□□□□ -0.63
MTHFD1-214ENST00000556771 NACA2Q9H009 215 aa11.12□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms