RNA–Protein interactions for RNA: ENST00000556375.5

SLIRP-206, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 2

Gene SLIRP, Length 408 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-206ENST00000556375 BCAT1P54687 386 aa12.17□□□□□ -0.46
SLIRP-206ENST00000556375 SLC8A3P57103 927 aa12.17□□□□□ -0.46
SLIRP-206ENST00000556375 NHLH1Q02575 133 aa12.17□□□□□ -0.46
SLIRP-206ENST00000556375 TNK2Q07912 1038 aa12.17□□□□□ -0.46
SLIRP-206ENST00000556375 MAN2A1Q16706 1144 aa12.17□□□□□ -0.46
SLIRP-206ENST00000556375 GOLGA7BQ2TAP0 167 aa12.17□□□□□ -0.46
SLIRP-206ENST00000556375 ITPRIPL2Q3MIP1 535 aa12.17□□□□□ -0.46
SLIRP-206ENST00000556375 HECTD3Q5T447 861 aa12.17□□□□□ -0.46
SLIRP-206ENST00000556375 TMEM270Q6UE05 265 aa12.17□□□□□ -0.46
SLIRP-206ENST00000556375 RALGPS2Q86X27 583 aaPredicted RBP12.17□□□□□ -0.46
SLIRP-206ENST00000556375 DDX42Q86XP3 938 aaKnown RBP eCLIP12.17□□□□□ -0.46
SLIRP-206ENST00000556375 ARHGEF19Q8IW93 802 aa12.17□□□□□ -0.46
SLIRP-206ENST00000556375 ZNF687Q8N1G0 1237 aa12.17□□□□□ -0.46
SLIRP-206ENST00000556375 KIAA1958Q8N8K9 716 aa12.17□□□□□ -0.46
SLIRP-206ENST00000556375 ANKRD52Q8NB46 1076 aa12.17□□□□□ -0.46
SLIRP-206ENST00000556375 OSCP1Q8WVF1 389 aa12.17□□□□□ -0.46
SLIRP-206ENST00000556375 FAM3CQ92520 227 aa12.17□□□□□ -0.46
SLIRP-206ENST00000556375 KAT5Q92993 513 aa12.17□□□□□ -0.46
SLIRP-206ENST00000556375 CLDN23Q96B33 292 aa12.17□□□□□ -0.46
SLIRP-206ENST00000556375 FAM122AQ96E09 287 aa12.17□□□□□ -0.46
SLIRP-206ENST00000556375 IRF2BPLQ9H1B7 796 aa12.17□□□□□ -0.46
SLIRP-206ENST00000556375 HPS4Q9NQG7 708 aa12.17□□□□□ -0.46
SLIRP-206ENST00000556375 TLR8Q9NR97 1041 aaKnown RBP12.17□□□□□ -0.46
SLIRP-206ENST00000556375 GKN1Q9NS71 199 aa12.17□□□□□ -0.46
SLIRP-206ENST00000556375 TSPAN16Q9UKR8 245 aa12.17□□□□□ -0.46
SLIRP-206ENST00000556375 KIAA1257Q9ULG3 409 aa12.17□□□□□ -0.46
SLIRP-206ENST00000556375 MTF2Q9Y483 593 aaPredicted RBP12.17□□□□□ -0.46
SLIRP-206ENST00000556375 PCDHB4Q9Y5E5 795 aa12.17□□□□□ -0.46
SLIRP-206ENST00000556375 CPQQ9Y646 472 aa12.17□□□□□ -0.46
SLIRP-206ENST00000556375 CACNA1IQ9P0X4 2223 aa12.17□□□□□ -0.46
SLIRP-206ENST00000556375 SPECC1L-ADORA2AF8WAN1 911 aa12.16□□□□□ -0.46
SLIRP-206ENST00000556375 LEFTY2O00292 366 aa12.16□□□□□ -0.46
SLIRP-206ENST00000556375 O00370 1275 aa12.16□□□□□ -0.46
SLIRP-206ENST00000556375 CYP26A1O43174 497 aa12.16□□□□□ -0.46
SLIRP-206ENST00000556375 COCHO43405 550 aa12.16□□□□□ -0.46
SLIRP-206ENST00000556375 TLR5O60602 858 aa12.16□□□□□ -0.46
SLIRP-206ENST00000556375 MBL2P11226 248 aaPredicted RBP12.16□□□□□ -0.46
SLIRP-206ENST00000556375 VDRP11473 427 aa12.16□□□□□ -0.46
SLIRP-206ENST00000556375 RPS9P46781 194 aaKnown RBP12.16□□□□□ -0.46
SLIRP-206ENST00000556375 SOX9P48436 509 aa12.16□□□□□ -0.46
SLIRP-206ENST00000556375 IFNAR2P48551 515 aa12.16□□□□□ -0.46
SLIRP-206ENST00000556375 KIF11P52732 1056 aa12.16□□□□□ -0.46
SLIRP-206ENST00000556375 ZNF132P52740 706 aa12.16□□□□□ -0.46
SLIRP-206ENST00000556375 ZXDBP98169 803 aa12.16□□□□□ -0.46
SLIRP-206ENST00000556375 BST2Q10589 180 aaKnown RBP12.16□□□□□ -0.46
SLIRP-206ENST00000556375 RUNX3Q13761 415 aa12.16□□□□□ -0.46
SLIRP-206ENST00000556375 CCDC183Q5T5S1 534 aa12.16□□□□□ -0.46
SLIRP-206ENST00000556375 TRIM68Q6AZZ1 485 aa12.16□□□□□ -0.46
SLIRP-206ENST00000556375 TRIM65Q6PJ69 517 aa12.16□□□□□ -0.46
SLIRP-206ENST00000556375 GBP6Q6ZN66 633 aa12.16□□□□□ -0.46
SLIRP-206ENST00000556375 RRAGAQ7L523 313 aa12.16□□□□□ -0.46
SLIRP-206ENST00000556375 CCDC186Q7Z3E2 898 aa12.16□□□□□ -0.46
SLIRP-206ENST00000556375 TTC30AQ86WT1 665 aa12.16□□□□□ -0.46
SLIRP-206ENST00000556375 CREBRFQ8IUR6 639 aa12.16□□□□□ -0.46
SLIRP-206ENST00000556375 CPA6Q8N4T0 437 aa12.16□□□□□ -0.46
SLIRP-206ENST00000556375 RBBP8NLQ8NC74 664 aaPredicted RBP12.16□□□□□ -0.46
SLIRP-206ENST00000556375 TTC16Q8NEE8 873 aa12.16□□□□□ -0.46
SLIRP-206ENST00000556375 ATP2A3Q93084 1043 aa12.16□□□□□ -0.46
SLIRP-206ENST00000556375 FAM81BQ96LP2 452 aa12.16□□□□□ -0.46
SLIRP-206ENST00000556375 KREMEN1Q96MU8 473 aa12.16□□□□□ -0.46
SLIRP-206ENST00000556375 UBXN6Q9BZV1 441 aa12.16□□□□□ -0.46
SLIRP-206ENST00000556375 RNF38Q9H0F5 515 aa12.16□□□□□ -0.46
SLIRP-206ENST00000556375 EBF3Q9H4W6 596 aa12.16□□□□□ -0.46
SLIRP-206ENST00000556375 CCSER2Q9H7U1 834 aa12.16□□□□□ -0.46
SLIRP-206ENST00000556375 CYLDQ9NQC7 956 aa12.16□□□□□ -0.46
SLIRP-206ENST00000556375 DUS2Q9NX74 493 aaKnown RBP12.16□□□□□ -0.46
SLIRP-206ENST00000556375 SMPD4Q9NXE4 827 aa12.16□□□□□ -0.46
SLIRP-206ENST00000556375 HESX1Q9UBX0 185 aa12.16□□□□□ -0.46
SLIRP-206ENST00000556375 CHORDC1Q9UHD1 332 aaPredicted RBP12.16□□□□□ -0.46
SLIRP-206ENST00000556375 NDRG2Q9UN36 371 aaKnown RBP12.16□□□□□ -0.46
SLIRP-206ENST00000556375 USP3Q9Y6I4 520 aa12.16□□□□□ -0.46
SLIRP-206ENST00000556375 FANCMQ8IYD8 2048 aa12.15□□□□□ -0.46
SLIRP-206ENST00000556375 XPO1O14980 1071 aaKnown RBP12.15□□□□□ -0.46
SLIRP-206ENST00000556375 SETSIPP0DME0 302 aa12.15□□□□□ -0.46
SLIRP-206ENST00000556375 ARSAP15289 507 aa12.15□□□□□ -0.46
SLIRP-206ENST00000556375 ANGPT1Q15389 498 aa12.15□□□□□ -0.46
SLIRP-206ENST00000556375 STILQ15468 1287 aa12.15□□□□□ -0.46
SLIRP-206ENST00000556375 EXOC3L4Q17RC7 722 aa12.15□□□□□ -0.46
SLIRP-206ENST00000556375 EML3Q32P44 896 aa12.15□□□□□ -0.46
SLIRP-206ENST00000556375 RAB41Q5JT25 222 aa12.15□□□□□ -0.46
SLIRP-206ENST00000556375 TXNDC11Q6PKC3 985 aa12.15□□□□□ -0.46
SLIRP-206ENST00000556375 ENOSF1Q7L5Y1 443 aa12.15□□□□□ -0.46
SLIRP-206ENST00000556375 PIGZQ86VD9 579 aa12.15□□□□□ -0.46
SLIRP-206ENST00000556375 TTC8Q8TAM2 541 aa12.15□□□□□ -0.46
SLIRP-206ENST00000556375 ENOX1Q8TC92 643 aaKnown RBP12.15□□□□□ -0.46
SLIRP-206ENST00000556375 ZFRQ96KR1 1074 aaKnown RBP12.15□□□□□ -0.46
SLIRP-206ENST00000556375 CRACR2AQ9BSW2 395 aa12.15□□□□□ -0.46
SLIRP-206ENST00000556375 IER2Q9BTL4 223 aa12.15□□□□□ -0.46
SLIRP-206ENST00000556375 CNTN6Q9UQ52 1028 aa12.15□□□□□ -0.46
SLIRP-206ENST00000556375 WNT6Q9Y6F9 365 aa12.15□□□□□ -0.46
SLIRP-206ENST00000556375 KIAA1549LQ6ZVL6 1849 aa12.15□□□□□ -0.46
SLIRP-206ENST00000556375 OTOL1A6NHN0 477 aaPredicted RBP12.14□□□□□ -0.47
SLIRP-206ENST00000556375 KCNJ18B7U540 433 aa12.14□□□□□ -0.47
SLIRP-206ENST00000556375 H0Y858 1186 aa12.14□□□□□ -0.47
SLIRP-206ENST00000556375 SLC9A3R1O14745 358 aaPredicted RBP12.14□□□□□ -0.47
SLIRP-206ENST00000556375 NFATC1O95644 943 aa12.14□□□□□ -0.47
SLIRP-206ENST00000556375 PRKCSHP14314 528 aaPredicted RBP12.14□□□□□ -0.47
SLIRP-206ENST00000556375 EEF1GP26641 437 aaKnown RBP12.14□□□□□ -0.47
SLIRP-206ENST00000556375 PGFP49763 221 aa12.14□□□□□ -0.47
SLIRP-206ENST00000556375 PSEN1P49768 467 aa12.14□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms