RNA–Protein interactions for RNA: ENST00000556310.1

SLIRP-205, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 2

Gene SLIRP, Length 626 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-205ENST00000556310 OAS1P00973 400 aaKnown RBP12.2□□□□□ -0.46
SLIRP-205ENST00000556310 GLULP15104 373 aa12.2□□□□□ -0.46
SLIRP-205ENST00000556310 TCF3P15923 654 aa12.2□□□□□ -0.46
SLIRP-205ENST00000556310 ERCC5P28715 1186 aaPredicted RBP12.2□□□□□ -0.46
SLIRP-205ENST00000556310 PTPN5P54829 565 aa12.2□□□□□ -0.46
SLIRP-205ENST00000556310 MLLT6P55198 1093 aaPredicted RBP12.2□□□□□ -0.46
SLIRP-205ENST00000556310 PRSS12P56730 875 aa12.2□□□□□ -0.46
SLIRP-205ENST00000556310 MAP3K7CLP57077 242 aa12.2□□□□□ -0.46
SLIRP-205ENST00000556310 LRMPQ12912 555 aa12.2□□□□□ -0.46
SLIRP-205ENST00000556310 ZNF77Q15935 545 aa12.2□□□□□ -0.46
SLIRP-205ENST00000556310 PPP1R26Q5T8A7 1209 aaPredicted RBP12.2□□□□□ -0.46
SLIRP-205ENST00000556310 ARHGAP17Q68EM7 881 aa12.2□□□□□ -0.46
SLIRP-205ENST00000556310 C1orf228Q6PIY5 440 aa12.2□□□□□ -0.46
SLIRP-205ENST00000556310 ZNF852Q6ZMS4 543 aa12.2□□□□□ -0.46
SLIRP-205ENST00000556310 RBM43Q6ZSC3 357 aaKnown RBP12.2□□□□□ -0.46
SLIRP-205ENST00000556310 CCDC105Q8IYK2 499 aa12.2□□□□□ -0.46
SLIRP-205ENST00000556310 ARL14EPQ8N8R7 260 aaPredicted RBP12.2□□□□□ -0.46
SLIRP-205ENST00000556310 SCAMP5Q8TAC9 235 aa12.2□□□□□ -0.46
SLIRP-205ENST00000556310 LMO3Q8TAP4 145 aa12.2□□□□□ -0.46
SLIRP-205ENST00000556310 RIN3Q8TB24 985 aa12.2□□□□□ -0.46
SLIRP-205ENST00000556310 CSGALNACT1Q8TDX6 532 aa12.2□□□□□ -0.46
SLIRP-205ENST00000556310 TMEM176AQ96HP8 235 aa12.2□□□□□ -0.46
SLIRP-205ENST00000556310 ZFYVE19Q96K21 471 aa12.2□□□□□ -0.46
SLIRP-205ENST00000556310 ARHGAP26Q9UNA1 814 aa12.2□□□□□ -0.46
SLIRP-205ENST00000556310 MRPS17Q9Y2R5 130 aaKnown RBP12.2□□□□□ -0.46
SLIRP-205ENST00000556310 SIT1Q9Y3P8 196 aa12.2□□□□□ -0.46
SLIRP-205ENST00000556310 PIAS3Q9Y6X2 628 aa12.2□□□□□ -0.46
SLIRP-205ENST00000556310 SHISA7A6NL88 538 aa12.19□□□□□ -0.46
SLIRP-205ENST00000556310 HHLA1C9JL84 531 aa12.19□□□□□ -0.46
SLIRP-205ENST00000556310 HDCP19113 662 aa12.19□□□□□ -0.46
SLIRP-205ENST00000556310 TUBP50607 506 aa12.19□□□□□ -0.46
SLIRP-205ENST00000556310 SLC7A9P82251 487 aa12.19□□□□□ -0.46
SLIRP-205ENST00000556310 GCNT1Q02742 428 aa12.19□□□□□ -0.46
SLIRP-205ENST00000556310 TCF15Q12870 199 aa12.19□□□□□ -0.46
SLIRP-205ENST00000556310 MTF1Q14872 753 aa12.19□□□□□ -0.46
SLIRP-205ENST00000556310 UBXN2BQ14CS0 331 aa12.19□□□□□ -0.46
SLIRP-205ENST00000556310 TPD52L1Q16890 204 aaPredicted RBP12.19□□□□□ -0.46
SLIRP-205ENST00000556310 CT47A1Q5JQC4 288 aaPredicted RBP12.19□□□□□ -0.46
SLIRP-205ENST00000556310 SNX30Q5VWJ9 437 aa12.19□□□□□ -0.46
SLIRP-205ENST00000556310 IRF2BP1Q8IU81 584 aa12.19□□□□□ -0.46
SLIRP-205ENST00000556310 FAM114A1Q8IWE2 563 aa12.19□□□□□ -0.46
SLIRP-205ENST00000556310 PPM1KQ8N3J5 372 aa12.19□□□□□ -0.46
SLIRP-205ENST00000556310 DTWD2Q8NBA8 298 aa12.19□□□□□ -0.46
SLIRP-205ENST00000556310 HEXIM2Q96MH2 286 aaKnown RBP12.19□□□□□ -0.46
SLIRP-205ENST00000556310 HS3ST6Q96QI5 342 aa12.19□□□□□ -0.46
SLIRP-205ENST00000556310 CYP2S1Q96SQ9 504 aa12.19□□□□□ -0.46
SLIRP-205ENST00000556310 NELL2Q99435 816 aa12.19□□□□□ -0.46
SLIRP-205ENST00000556310 DUSP16Q9BY84 665 aa12.19□□□□□ -0.46
SLIRP-205ENST00000556310 FBXO44Q9H4M3 255 aa12.19□□□□□ -0.46
SLIRP-205ENST00000556310 THAP9Q9H5L6 903 aa12.19□□□□□ -0.46
SLIRP-205ENST00000556310 C8orf33Q9H7E9 229 aaPredicted RBP12.19□□□□□ -0.46
SLIRP-205ENST00000556310 GMIPQ9P107 970 aa12.19□□□□□ -0.46
SLIRP-205ENST00000556310 DLGAP2Q9P1A6 1054 aa12.19□□□□□ -0.46
SLIRP-205ENST00000556310 DCNP07585 359 aaKnown RBP12.18□□□□□ -0.46
SLIRP-205ENST00000556310 ZDHHC11BP0C7U3 371 aa12.18□□□□□ -0.46
SLIRP-205ENST00000556310 ACO1P21399 889 aaKnown RBP12.18□□□□□ -0.46
SLIRP-205ENST00000556310 CD72P21854 359 aa12.18□□□□□ -0.46
SLIRP-205ENST00000556310 TARSP26639 723 aaKnown RBP12.18□□□□□ -0.46
SLIRP-205ENST00000556310 PLA2G5P39877 138 aa12.18□□□□□ -0.46
SLIRP-205ENST00000556310 MAGEA9P43362 315 aa12.18□□□□□ -0.46
SLIRP-205ENST00000556310 KPNA1P52294 538 aaPredicted RBP12.18□□□□□ -0.46
SLIRP-205ENST00000556310 PDGFRLQ15198 375 aa12.18□□□□□ -0.46
SLIRP-205ENST00000556310 SGO2Q562F6 1265 aa12.18□□□□□ -0.46
SLIRP-205ENST00000556310 CC2D1AQ6P1N0 951 aaPredicted RBP12.18□□□□□ -0.46
SLIRP-205ENST00000556310 GPRIN1Q7Z2K8 1008 aa12.18□□□□□ -0.46
SLIRP-205ENST00000556310 EHBP1Q8NDI1 1231 aa12.18□□□□□ -0.46
SLIRP-205ENST00000556310 SH3RF2Q8TEC5 729 aa12.18□□□□□ -0.46
SLIRP-205ENST00000556310 JAKMIP2Q96AA8 810 aa12.18□□□□□ -0.46
SLIRP-205ENST00000556310 FAM83CQ9BQN1 747 aa12.18□□□□□ -0.46
SLIRP-205ENST00000556310 INTS2Q9H0H0 1204 aaKnown RBP12.18□□□□□ -0.46
SLIRP-205ENST00000556310 GTSE1Q9NYZ3 720 aa12.18□□□□□ -0.46
SLIRP-205ENST00000556310 SCML2Q9UQR0 700 aa12.18□□□□□ -0.46
SLIRP-205ENST00000556310 PIEZO1Q92508 2521 aa12.18□□□□□ -0.46
SLIRP-205ENST00000556310 GTPBP10A4D1E9 387 aaKnown RBP12.17□□□□□ -0.46
SLIRP-205ENST00000556310 FAM170BA6NMN3 283 aa12.17□□□□□ -0.46
SLIRP-205ENST00000556310 NCAM2O15394 837 aa12.17□□□□□ -0.46
SLIRP-205ENST00000556310 ABL1P00519 1130 aa12.17□□□□□ -0.46
SLIRP-205ENST00000556310 PAEPP09466 180 aa12.17□□□□□ -0.46
SLIRP-205ENST00000556310 CD19P15391 556 aa12.17□□□□□ -0.46
SLIRP-205ENST00000556310 CTHP32929 405 aa12.17□□□□□ -0.46
SLIRP-205ENST00000556310 MTIF2P46199 727 aaKnown RBP12.17□□□□□ -0.46
SLIRP-205ENST00000556310 BCAT1P54687 386 aa12.17□□□□□ -0.46
SLIRP-205ENST00000556310 SLC8A3P57103 927 aa12.17□□□□□ -0.46
SLIRP-205ENST00000556310 NHLH1Q02575 133 aa12.17□□□□□ -0.46
SLIRP-205ENST00000556310 TNK2Q07912 1038 aa12.17□□□□□ -0.46
SLIRP-205ENST00000556310 MAN2A1Q16706 1144 aa12.17□□□□□ -0.46
SLIRP-205ENST00000556310 GOLGA7BQ2TAP0 167 aa12.17□□□□□ -0.46
SLIRP-205ENST00000556310 ITPRIPL2Q3MIP1 535 aa12.17□□□□□ -0.46
SLIRP-205ENST00000556310 HECTD3Q5T447 861 aa12.17□□□□□ -0.46
SLIRP-205ENST00000556310 TMEM270Q6UE05 265 aa12.17□□□□□ -0.46
SLIRP-205ENST00000556310 RALGPS2Q86X27 583 aaPredicted RBP12.17□□□□□ -0.46
SLIRP-205ENST00000556310 DDX42Q86XP3 938 aaKnown RBP eCLIP12.17□□□□□ -0.46
SLIRP-205ENST00000556310 ARHGEF19Q8IW93 802 aa12.17□□□□□ -0.46
SLIRP-205ENST00000556310 ZNF687Q8N1G0 1237 aa12.17□□□□□ -0.46
SLIRP-205ENST00000556310 KIAA1958Q8N8K9 716 aa12.17□□□□□ -0.46
SLIRP-205ENST00000556310 ANKRD52Q8NB46 1076 aa12.17□□□□□ -0.46
SLIRP-205ENST00000556310 OSCP1Q8WVF1 389 aa12.17□□□□□ -0.46
SLIRP-205ENST00000556310 FAM3CQ92520 227 aa12.17□□□□□ -0.46
SLIRP-205ENST00000556310 KAT5Q92993 513 aa12.17□□□□□ -0.46
SLIRP-205ENST00000556310 CLDN23Q96B33 292 aa12.17□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms