RNA–Protein interactions for RNA: ENST00000555872.5

EFCAB11-208, Transcript of EF-hand calcium binding domain 11, humanhuman

TSL 1 (best) BASIC

Gene EFCAB11, Length 2,716 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFCAB11-208ENST00000555872 SRP68Q9UHB9 627 aaKnown RBP10.76□□□□□ -0.69
EFCAB11-208ENST00000555872 FAF1Q9UNN5 650 aaPredicted RBP10.76□□□□□ -0.69
EFCAB11-208ENST00000555872 PCDHB4Q9Y5E5 795 aa10.76□□□□□ -0.69
EFCAB11-208ENST00000555872 ADGRA3Q8IWK6 1321 aa10.76□□□□□ -0.69
EFCAB11-208ENST00000555872 A0A088AWK7 358 aa10.75□□□□□ -0.69
EFCAB11-208ENST00000555872 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP10.75□□□□□ -0.69
EFCAB11-208ENST00000555872 E9PMD0 336 aa10.75□□□□□ -0.69
EFCAB11-208ENST00000555872 LAD1O00515 517 aa10.75□□□□□ -0.69
EFCAB11-208ENST00000555872 NCAM2O15394 837 aa10.75□□□□□ -0.69
EFCAB11-208ENST00000555872 HNRNPCL1O60812 293 aaKnown RBP10.75□□□□□ -0.69
EFCAB11-208ENST00000555872 ZBTB11O95625 1053 aaPredicted RBP10.75□□□□□ -0.69
EFCAB11-208ENST00000555872 HLA-DRAP01903 254 aa10.75□□□□□ -0.69
EFCAB11-208ENST00000555872 ANPEPP15144 967 aa10.75□□□□□ -0.69
EFCAB11-208ENST00000555872 ZNF16P17020 682 aaPredicted RBP10.75□□□□□ -0.69
EFCAB11-208ENST00000555872 RGS2P41220 211 aa10.75□□□□□ -0.69
EFCAB11-208ENST00000555872 DCTN2Q13561 401 aaKnown RBP10.75□□□□□ -0.69
EFCAB11-208ENST00000555872 LLGL1Q15334 1064 aa10.75□□□□□ -0.69
EFCAB11-208ENST00000555872 TMED2Q15363 201 aa10.75□□□□□ -0.69
EFCAB11-208ENST00000555872 LRRC36Q1X8D7 754 aa10.75□□□□□ -0.69
EFCAB11-208ENST00000555872 PLEKHG4Q58EX7 1191 aa10.75□□□□□ -0.69
EFCAB11-208ENST00000555872 TMEM63BQ5T3F8 832 aa10.75□□□□□ -0.69
EFCAB11-208ENST00000555872 AMIGO3Q86WK7 504 aa10.75□□□□□ -0.69
EFCAB11-208ENST00000555872 LARP4BQ92615 738 aaKnown RBP10.75□□□□□ -0.69
EFCAB11-208ENST00000555872 KLRG1Q96E93 195 aa10.75□□□□□ -0.69
EFCAB11-208ENST00000555872 NRBF2Q96F24 287 aa10.75□□□□□ -0.69
EFCAB11-208ENST00000555872 POM121Q96HA1 1249 aa10.75□□□□□ -0.69
EFCAB11-208ENST00000555872 TSNARE1Q96NA8 513 aa10.75□□□□□ -0.69
EFCAB11-208ENST00000555872 PTTG2Q9NZH5 202 aa10.75□□□□□ -0.69
EFCAB11-208ENST00000555872 GRID1Q9ULK0 1009 aa10.75□□□□□ -0.69
EFCAB11-208ENST00000555872 TMEM5Q9Y2B1 443 aa10.75□□□□□ -0.69
EFCAB11-208ENST00000555872 TIAM2Q8IVF5 1701 aa10.75□□□□□ -0.69
EFCAB11-208ENST00000555872 SMIM31A0A1B0GVY4 71 aa10.75□□□□□ -0.69
EFCAB11-208ENST00000555872 TCRBV7S2A1N4TA0A589 114 aa10.75□□□□□ -0.69
EFCAB11-208ENST00000555872 TYW5A2RUC4 315 aaKnown RBP10.75□□□□□ -0.69
EFCAB11-208ENST00000555872 ZNF862O60290 1169 aa10.75□□□□□ -0.69
EFCAB11-208ENST00000555872 USP1O94782 785 aa10.75□□□□□ -0.69
EFCAB11-208ENST00000555872 ZWINTO95229 277 aa10.75□□□□□ -0.69
EFCAB11-208ENST00000555872 RETP07949 1114 aa10.75□□□□□ -0.69
EFCAB11-208ENST00000555872 UQCRFS1P1P0C7P4 283 aa10.75□□□□□ -0.69
EFCAB11-208ENST00000555872 SFTPCP11686 197 aa10.75□□□□□ -0.69
EFCAB11-208ENST00000555872 MARCKSL1P49006 195 aa10.75□□□□□ -0.69
EFCAB11-208ENST00000555872 VPS41P49754 854 aa10.75□□□□□ -0.69
EFCAB11-208ENST00000555872 NAA20P61599 178 aa10.75□□□□□ -0.69
EFCAB11-208ENST00000555872 PPATQ06203 517 aa10.75□□□□□ -0.69
EFCAB11-208ENST00000555872 ERFEQ4G0M1 354 aa10.75□□□□□ -0.69
EFCAB11-208ENST00000555872 CCDC58Q4VC31 144 aa10.75□□□□□ -0.69
EFCAB11-208ENST00000555872 OTOAQ7RTW8 1153 aa10.75□□□□□ -0.69
EFCAB11-208ENST00000555872 GLYCTKQ8IVS8 523 aa10.75□□□□□ -0.69
EFCAB11-208ENST00000555872 GTF3C2Q8WUA4 911 aaPredicted RBP10.75□□□□□ -0.69
EFCAB11-208ENST00000555872 RFFLQ8WZ73 363 aa10.75□□□□□ -0.69
EFCAB11-208ENST00000555872 KRT35Q92764 455 aa10.75□□□□□ -0.69
EFCAB11-208ENST00000555872 DGCR14Q96DF8 476 aaKnown RBP10.75□□□□□ -0.69
EFCAB11-208ENST00000555872 PWWP2AQ96N64 755 aa10.75□□□□□ -0.69
EFCAB11-208ENST00000555872 COQ7Q99807 217 aa10.75□□□□□ -0.69
EFCAB11-208ENST00000555872 DHRS9Q9BPW9 319 aa10.75□□□□□ -0.69
EFCAB11-208ENST00000555872 PALMDQ9NP74 551 aa10.75□□□□□ -0.69
EFCAB11-208ENST00000555872 TAS2R1Q9NYW7 299 aa10.75□□□□□ -0.69
EFCAB11-208ENST00000555872 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP10.74□□□□□ -0.69
EFCAB11-208ENST00000555872 SNAP23O00161 211 aa10.74□□□□□ -0.69
EFCAB11-208ENST00000555872 IFRD1O00458 451 aaPredicted RBP10.74□□□□□ -0.69
EFCAB11-208ENST00000555872 E2F3O00716 465 aa10.74□□□□□ -0.69
EFCAB11-208ENST00000555872 C2CD2LO14523 706 aa10.74□□□□□ -0.69
EFCAB11-208ENST00000555872 GPR37O15354 613 aa10.74□□□□□ -0.69
EFCAB11-208ENST00000555872 CDH16O75309 829 aa10.74□□□□□ -0.69
EFCAB11-208ENST00000555872 HAUS5O94927 633 aa10.74□□□□□ -0.69
EFCAB11-208ENST00000555872 PDE8BO95263 885 aa10.74□□□□□ -0.69
EFCAB11-208ENST00000555872 APBA3O96018 575 aa10.74□□□□□ -0.69
EFCAB11-208ENST00000555872 GSSP48637 474 aa10.74□□□□□ -0.69
EFCAB11-208ENST00000555872 SEPHS1P49903 392 aa10.74□□□□□ -0.69
EFCAB11-208ENST00000555872 MAP3K10Q02779 954 aa10.74□□□□□ -0.69
EFCAB11-208ENST00000555872 GRB10Q13322 594 aa10.74□□□□□ -0.69
EFCAB11-208ENST00000555872 RASGRF1Q13972 1273 aa10.74□□□□□ -0.69
EFCAB11-208ENST00000555872 SPARCL1Q14515 664 aa10.74□□□□□ -0.69
EFCAB11-208ENST00000555872 SPOPLQ6IQ16 392 aa10.74□□□□□ -0.69
EFCAB11-208ENST00000555872 PLBD1Q6P4A8 553 aa10.74□□□□□ -0.69
EFCAB11-208ENST00000555872 GJB7Q6PEY0 223 aa10.74□□□□□ -0.69
EFCAB11-208ENST00000555872 SLC44A2Q8IWA5 706 aaPredicted RBP10.74□□□□□ -0.69
EFCAB11-208ENST00000555872 ZNF565Q8N9K5 539 aa10.74□□□□□ -0.69
EFCAB11-208ENST00000555872 DDX55Q8NHQ9 600 aaKnown RBP eCLIP10.74□□□□□ -0.69
EFCAB11-208ENST00000555872 GADD45GIP1Q8TAE8 222 aaPredicted RBP10.74□□□□□ -0.69
EFCAB11-208ENST00000555872 FATE1Q969F0 183 aa10.74□□□□□ -0.69
EFCAB11-208ENST00000555872 AKT1S1Q96B36 256 aa10.74□□□□□ -0.69
EFCAB11-208ENST00000555872 FAM161BQ96MY7 647 aa10.74□□□□□ -0.69
EFCAB11-208ENST00000555872 VPS35Q96QK1 796 aa10.74□□□□□ -0.69
EFCAB11-208ENST00000555872 PHF12Q96QT6 1004 aa10.74□□□□□ -0.69
EFCAB11-208ENST00000555872 NEURL2Q9BR09 285 aa10.74□□□□□ -0.69
EFCAB11-208ENST00000555872 FGFBP2Q9BYJ0 223 aa10.74□□□□□ -0.69
EFCAB11-208ENST00000555872 NDE1Q9NXR1 346 aa10.74□□□□□ -0.69
EFCAB11-208ENST00000555872 AJAP1Q9UKB5 411 aaPredicted RBP10.74□□□□□ -0.69
EFCAB11-208ENST00000555872 NENFQ9UMX5 172 aa10.74□□□□□ -0.69
EFCAB11-208ENST00000555872 SEC23IPQ9Y6Y8 1000 aaKnown RBP10.74□□□□□ -0.69
EFCAB11-208ENST00000555872 TNRC6CQ9HCJ0 1690 aaKnown RBP10.74□□□□□ -0.69
EFCAB11-208ENST00000555872 CCDC88AQ3V6T2 1871 aa10.74□□□□□ -0.69
EFCAB11-208ENST00000555872 TBX3O15119 743 aa10.74□□□□□ -0.69
EFCAB11-208ENST00000555872 CHRNB2P17787 502 aa10.74□□□□□ -0.69
EFCAB11-208ENST00000555872 CRABP2P29373 138 aa10.74□□□□□ -0.69
EFCAB11-208ENST00000555872 PGM1P36871 562 aa10.74□□□□□ -0.69
EFCAB11-208ENST00000555872 PRKCIP41743 596 aa10.74□□□□□ -0.69
EFCAB11-208ENST00000555872 IST1P53990 364 aa10.74□□□□□ -0.69
EFCAB11-208ENST00000555872 OVGP1Q12889 678 aa10.74□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms