RNA–Protein interactions for RNA: ENST00000555752.1

SUPT16H-203, Transcript of SPT16 homolog, facilitates chromatin remodeling subunit, humanhuman

TSL 2

Gene SUPT16H, Length 888 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT16H-203ENST00000555752 HVCN1Q96D96 273 aa20.24■□□□□ 0.83
SUPT16H-203ENST00000555752 PCED1BQ96HM7 432 aa20.24■□□□□ 0.83
SUPT16H-203ENST00000555752 KIF2CQ99661 725 aa20.24■□□□□ 0.83
SUPT16H-203ENST00000555752 CBWD1Q9BRT8 395 aa20.24■□□□□ 0.83
SUPT16H-203ENST00000555752 PCIF1Q9H4Z3 704 aa20.24■□□□□ 0.83
SUPT16H-203ENST00000555752 MRPL44Q9H9J2 332 aaKnown RBP20.24■□□□□ 0.83
SUPT16H-203ENST00000555752 CD93Q9NPY3 652 aa20.24■□□□□ 0.83
SUPT16H-203ENST00000555752 NME7Q9Y5B8 376 aa20.24■□□□□ 0.83
SUPT16H-203ENST00000555752 SMG1Q96Q15 3661 aaKnown RBP20.23■□□□□ 0.83
SUPT16H-203ENST00000555752 IGHV1OR15-9A0A0B4J2B8 117 aa20.23■□□□□ 0.83
SUPT16H-203ENST00000555752 TBC1D3BA6NDS4 549 aa20.23■□□□□ 0.83
SUPT16H-203ENST00000555752 MBL2P11226 248 aaPredicted RBP20.23■□□□□ 0.83
SUPT16H-203ENST00000555752 ANXA13P27216 316 aa20.23■□□□□ 0.83
SUPT16H-203ENST00000555752 IFRD2Q12894 506 aaPredicted RBP20.23■□□□□ 0.83
SUPT16H-203ENST00000555752 TRIP6Q15654 476 aaKnown RBP20.23■□□□□ 0.83
SUPT16H-203ENST00000555752 L1TD1Q5T7N2 865 aaKnown RBP20.23■□□□□ 0.83
SUPT16H-203ENST00000555752 USP49Q70CQ1 688 aa20.23■□□□□ 0.83
SUPT16H-203ENST00000555752 ZNF513Q8N8E2 541 aaPredicted RBP20.23■□□□□ 0.83
SUPT16H-203ENST00000555752 HPDLQ96IR7 371 aa20.23■□□□□ 0.83
SUPT16H-203ENST00000555752 FGFBP2Q9BYJ0 223 aa20.23■□□□□ 0.83
SUPT16H-203ENST00000555752 TMEM191BP0C7N4 346 aa20.22■□□□□ 0.83
SUPT16H-203ENST00000555752 MDH1BQ5I0G3 518 aa20.22■□□□□ 0.83
SUPT16H-203ENST00000555752 SLC36A4Q6YBV0 504 aa20.22■□□□□ 0.83
SUPT16H-203ENST00000555752 ETFBKMTQ8IXQ9 262 aa20.22■□□□□ 0.83
SUPT16H-203ENST00000555752 TRIML1Q8N9V2 468 aa20.22■□□□□ 0.83
SUPT16H-203ENST00000555752 HSPA12BQ96MM6 686 aa20.22■□□□□ 0.83
SUPT16H-203ENST00000555752 ACCSQ96QU6 501 aa20.22■□□□□ 0.83
SUPT16H-203ENST00000555752 DNAAF2Q9NVR5 837 aaKnown RBP20.22■□□□□ 0.83
SUPT16H-203ENST00000555752 A0A1W2PQF6 199 aa20.21■□□□□ 0.83
SUPT16H-203ENST00000555752 PALM2-AKAP2B1ALY0 433 aaPredicted RBP20.21■□□□□ 0.83
SUPT16H-203ENST00000555752 TRIM66O15016 1216 aa20.21■□□□□ 0.83
SUPT16H-203ENST00000555752 TULP3O75386 442 aa20.21■□□□□ 0.83
SUPT16H-203ENST00000555752 GJB3O75712 270 aa20.21■□□□□ 0.83
SUPT16H-203ENST00000555752 FTH1P19P0C7X4 201 aa20.21■□□□□ 0.83
SUPT16H-203ENST00000555752 HOXB2P14652 356 aa20.21■□□□□ 0.83
SUPT16H-203ENST00000555752 NOP14P78316 857 aaKnown RBP20.21■□□□□ 0.83
SUPT16H-203ENST00000555752 C10orf76Q5T2E6 689 aa20.21■□□□□ 0.83
SUPT16H-203ENST00000555752 HS2ST1Q7LGA3 356 aa20.21■□□□□ 0.83
SUPT16H-203ENST00000555752 KIAA1958Q8N8K9 716 aa20.21■□□□□ 0.83
SUPT16H-203ENST00000555752 MDM1Q8TC05 714 aa20.21■□□□□ 0.83
SUPT16H-203ENST00000555752 ADAMTS14Q8WXS8 1223 aa20.21■□□□□ 0.83
SUPT16H-203ENST00000555752 WBP2Q969T9 261 aa20.21■□□□□ 0.83
SUPT16H-203ENST00000555752 EPSTI1Q96J88 318 aa20.21■□□□□ 0.83
SUPT16H-203ENST00000555752 ZFRQ96KR1 1074 aaKnown RBP20.21■□□□□ 0.83
SUPT16H-203ENST00000555752 ACOX2Q99424 681 aa20.21■□□□□ 0.83
SUPT16H-203ENST00000555752 MRPL45Q9BRJ2 306 aaKnown RBP20.21■□□□□ 0.83
SUPT16H-203ENST00000555752 SLC6A17Q9H1V8 727 aa20.21■□□□□ 0.83
SUPT16H-203ENST00000555752 CYP8B1Q9UNU6 501 aa20.21■□□□□ 0.83
SUPT16H-203ENST00000555752 EXOC7Q9UPT5 735 aa20.21■□□□□ 0.83
SUPT16H-203ENST00000555752 GCNT3O95395 438 aa20.2■□□□□ 0.82
SUPT16H-203ENST00000555752 ZIC2O95409 532 aaPredicted RBP20.2■□□□□ 0.82
SUPT16H-203ENST00000555752 WARSP23381 471 aaKnown RBP20.2■□□□□ 0.82
SUPT16H-203ENST00000555752 LONP1P36776 959 aaKnown RBP20.2■□□□□ 0.82
SUPT16H-203ENST00000555752 PPP3CCP48454 512 aa20.2■□□□□ 0.82
SUPT16H-203ENST00000555752 GAD2Q05329 585 aa20.2■□□□□ 0.82
SUPT16H-203ENST00000555752 MAPRE1Q15691 268 aaKnown RBP20.2■□□□□ 0.82
SUPT16H-203ENST00000555752 PLEKHG6Q3KR16 790 aa20.2■□□□□ 0.82
SUPT16H-203ENST00000555752 EGFLAMQ63HQ2 1017 aa20.2■□□□□ 0.82
SUPT16H-203ENST00000555752 DPH6Q7L8W6 267 aa20.2■□□□□ 0.82
SUPT16H-203ENST00000555752 TMEM25Q86YD3 366 aa20.2■□□□□ 0.82
SUPT16H-203ENST00000555752 BBS7Q8IWZ6 715 aa20.2■□□□□ 0.82
SUPT16H-203ENST00000555752 MYCBPAPQ8TBZ2 947 aa20.2■□□□□ 0.82
SUPT16H-203ENST00000555752 HNRNPLLQ8WVV9 542 aaKnown RBP20.2■□□□□ 0.82
SUPT16H-203ENST00000555752 C8orf48Q96LL4 319 aa20.2■□□□□ 0.82
SUPT16H-203ENST00000555752 CEP295NLQ96MC4 621 aa20.2■□□□□ 0.82
SUPT16H-203ENST00000555752 BBC3Q96PG8 261 aaPredicted RBP20.2■□□□□ 0.82
SUPT16H-203ENST00000555752 INTS13Q9NVM9 706 aa20.2■□□□□ 0.82
SUPT16H-203ENST00000555752 IGSF10Q6WRI0 2623 aa20.19■□□□□ 0.82
SUPT16H-203ENST00000555752 E2F8A0AVK6 867 aa20.19■□□□□ 0.82
SUPT16H-203ENST00000555752 H3BQV1 296 aa20.19■□□□□ 0.82
SUPT16H-203ENST00000555752 CLDN5O00501 218 aa20.19■□□□□ 0.82
SUPT16H-203ENST00000555752 COCHO43405 550 aa20.19■□□□□ 0.82
SUPT16H-203ENST00000555752 LDHAP00338 332 aaKnown RBP20.19■□□□□ 0.82
SUPT16H-203ENST00000555752 NDUFV2P19404 249 aa20.19■□□□□ 0.82
SUPT16H-203ENST00000555752 GARTP22102 1010 aa20.19■□□□□ 0.82
SUPT16H-203ENST00000555752 MAOBP27338 520 aa20.19■□□□□ 0.82
SUPT16H-203ENST00000555752 MYO1EQ12965 1108 aa20.19■□□□□ 0.82
SUPT16H-203ENST00000555752 TDRD10Q5VZ19 366 aaKnown RBP20.19■□□□□ 0.82
SUPT16H-203ENST00000555752 CCNI2Q6ZMN8 369 aaPredicted RBP20.19■□□□□ 0.82
SUPT16H-203ENST00000555752 NAXDQ8IW45 347 aa20.19■□□□□ 0.82
SUPT16H-203ENST00000555752 SYCP3Q8IZU3 236 aa20.19■□□□□ 0.82
SUPT16H-203ENST00000555752 TERB1Q8NA31 727 aa20.19■□□□□ 0.82
SUPT16H-203ENST00000555752 DNAJC19Q96DA6 116 aa20.19■□□□□ 0.82
SUPT16H-203ENST00000555752 MMS19Q96T76 1030 aa20.19■□□□□ 0.82
SUPT16H-203ENST00000555752 ZNF518BQ9C0D4 1074 aa20.19■□□□□ 0.82
SUPT16H-203ENST00000555752 DPEP3Q9H4B8 488 aa20.19■□□□□ 0.82
SUPT16H-203ENST00000555752 CCDC86Q9H6F5 360 aaKnown RBP20.19■□□□□ 0.82
SUPT16H-203ENST00000555752 CD248Q9HCU0 757 aa20.19■□□□□ 0.82
SUPT16H-203ENST00000555752 TBC1D14Q9P2M4 693 aa20.19■□□□□ 0.82
SUPT16H-203ENST00000555752 DEC1Q9P2X7 70 aa20.19■□□□□ 0.82
SUPT16H-203ENST00000555752 GCN1Q92616 2671 aaKnown RBP20.18■□□□□ 0.82
SUPT16H-203ENST00000555752 HOXC11O43248 304 aaPredicted RBP20.18■□□□□ 0.82
SUPT16H-203ENST00000555752 SYPP08247 313 aa20.18■□□□□ 0.82
SUPT16H-203ENST00000555752 NTSR1P30989 418 aa20.18■□□□□ 0.82
SUPT16H-203ENST00000555752 HNRNPDQ14103 355 aaKnown RBP20.18■□□□□ 0.82
SUPT16H-203ENST00000555752 ANO4Q32M45 955 aa20.18■□□□□ 0.82
SUPT16H-203ENST00000555752 BTBD8Q5XKL5 378 aa20.18■□□□□ 0.82
SUPT16H-203ENST00000555752 RABEPKQ7Z6M1 372 aa20.18■□□□□ 0.82
SUPT16H-203ENST00000555752 SLCO6A1Q86UG4 719 aa20.18■□□□□ 0.82
SUPT16H-203ENST00000555752 DDX42Q86XP3 938 aaKnown RBP eCLIP20.18■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms