RNA–Protein interactions for RNA: ENST00000555746.5

SRP54-209, Transcript of signal recognition particle 54, humanhuman

TSL 4

Gene SRP54, Length 558 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-209ENST00000555746 PROKR1Q8TCW9 393 aa4.02□□□□□ -1.77
SRP54-209ENST00000555746 SSH3Q8TE77 659 aa4.02□□□□□ -1.77
SRP54-209ENST00000555746 SMCR8Q8TEV9 937 aaPredicted RBP4.02□□□□□ -1.77
SRP54-209ENST00000555746 ASB10Q8WXI3 467 aa4.02□□□□□ -1.77
SRP54-209ENST00000555746 LRRC59Q96AG4 307 aaKnown RBP4.02□□□□□ -1.77
SRP54-209ENST00000555746 ZNF747Q9BV97 191 aa4.02□□□□□ -1.77
SRP54-209ENST00000555746 MLST8Q9BVC4 326 aa4.02□□□□□ -1.77
SRP54-209ENST00000555746 STK33Q9BYT3 514 aa4.02□□□□□ -1.77
SRP54-209ENST00000555746 TRIM5Q9C035 493 aa4.02□□□□□ -1.77
SRP54-209ENST00000555746 VPS11Q9H270 941 aa4.02□□□□□ -1.77
SRP54-209ENST00000555746 SERHL2Q9H4I8 314 aa4.02□□□□□ -1.77
SRP54-209ENST00000555746 GJB4Q9NTQ9 266 aa4.02□□□□□ -1.77
SRP54-209ENST00000555746 CARMIL1Q5VZK9 1371 aa4.02□□□□□ -1.77
SRP54-209ENST00000555746 TNRQ92752 1358 aa4.02□□□□□ -1.77
SRP54-209ENST00000555746 PRDM15P57071 1507 aaPredicted RBP4.01□□□□□ -1.77
SRP54-209ENST00000555746 FNDC1Q4ZHG4 1894 aaPredicted RBP4.01□□□□□ -1.77
SRP54-209ENST00000555746 KDM5AP29375 1690 aaKnown RBP4.01□□□□□ -1.77
SRP54-209ENST00000555746 COL4A3Q01955 1670 aa4.01□□□□□ -1.77
SRP54-209ENST00000555746 NLRP1Q9C000 1473 aa4.01□□□□□ -1.77
SRP54-209ENST00000555746 hCG_1984214I3L0E3 225 aa4.01□□□□□ -1.77
SRP54-209ENST00000555746 RAB27BO00194 218 aa4.01□□□□□ -1.77
SRP54-209ENST00000555746 HNRNPDLO14979 420 aaKnown RBP4.01□□□□□ -1.77
SRP54-209ENST00000555746 ADAMTS3O15072 1205 aa4.01□□□□□ -1.77
SRP54-209ENST00000555746 TPD52L2O43399 206 aaKnown RBP4.01□□□□□ -1.77
SRP54-209ENST00000555746 NARSO43776 548 aaKnown RBP4.01□□□□□ -1.77
SRP54-209ENST00000555746 TPH1P17752 444 aa4.01□□□□□ -1.77
SRP54-209ENST00000555746 MAKP20794 623 aa4.01□□□□□ -1.77
SRP54-209ENST00000555746 TGM1P22735 817 aa4.01□□□□□ -1.77
SRP54-209ENST00000555746 ZEB1P37275 1124 aaPredicted RBP4.01□□□□□ -1.77
SRP54-209ENST00000555746 PTDSS1P48651 473 aaKnown RBP4.01□□□□□ -1.77
SRP54-209ENST00000555746 HNRNPMP52272 730 aaKnown RBP eCLIP4.01□□□□□ -1.77
SRP54-209ENST00000555746 COPAP53621 1224 aa4.01□□□□□ -1.77
SRP54-209ENST00000555746 TAP1Q03518 808 aa4.01□□□□□ -1.77
SRP54-209ENST00000555746 ITIH3Q06033 890 aa4.01□□□□□ -1.77
SRP54-209ENST00000555746 SF3B3Q15393 1217 aaKnown RBP4.01□□□□□ -1.77
SRP54-209ENST00000555746 KIAA0895LQ68EN5 471 aa4.01□□□□□ -1.77
SRP54-209ENST00000555746 RGS7BPQ6MZT1 257 aaPredicted RBP4.01□□□□□ -1.77
SRP54-209ENST00000555746 KCNV1Q6PIU1 500 aa4.01□□□□□ -1.77
SRP54-209ENST00000555746 C1orf228Q6PIY5 440 aa4.01□□□□□ -1.77
SRP54-209ENST00000555746 DTX2Q86UW9 622 aa4.01□□□□□ -1.77
SRP54-209ENST00000555746 KRT73Q86Y46 540 aa4.01□□□□□ -1.77
SRP54-209ENST00000555746 ENAHQ8N8S7 591 aaPredicted RBP4.01□□□□□ -1.77
SRP54-209ENST00000555746 SLC30A5Q8TAD4 765 aa4.01□□□□□ -1.77
SRP54-209ENST00000555746 LPIN2Q92539 896 aa4.01□□□□□ -1.77
SRP54-209ENST00000555746 ZNF566Q969W8 418 aa4.01□□□□□ -1.77
SRP54-209ENST00000555746 PTCD3Q96EY7 689 aaKnown RBP4.01□□□□□ -1.77
SRP54-209ENST00000555746 TMEM41AQ96HV5 264 aa4.01□□□□□ -1.77
SRP54-209ENST00000555746 COQ10AQ96MF6 247 aa4.01□□□□□ -1.77
SRP54-209ENST00000555746 ARPC5LQ9BPX5 153 aa4.01□□□□□ -1.77
SRP54-209ENST00000555746 TTLL2Q9BWV7 592 aa4.01□□□□□ -1.77
SRP54-209ENST00000555746 MAGEB5Q9BZ81 275 aa4.01□□□□□ -1.77
SRP54-209ENST00000555746 WDR11Q9BZH6 1224 aa4.01□□□□□ -1.77
SRP54-209ENST00000555746 HEYLQ9NQ87 328 aaPredicted RBP4.01□□□□□ -1.77
SRP54-209ENST00000555746 TM7SF3Q9NS93 570 aa4.01□□□□□ -1.77
SRP54-209ENST00000555746 TBC1D23Q9NUY8 699 aa4.01□□□□□ -1.77
SRP54-209ENST00000555746 KCTD5Q9NXV2 234 aa4.01□□□□□ -1.77
SRP54-209ENST00000555746 ANKFY1Q9P2R3 1169 aa4.01□□□□□ -1.77
SRP54-209ENST00000555746 MAN2B2Q9Y2E5 1009 aa4.01□□□□□ -1.77
SRP54-209ENST00000555746 TBC1D30Q9Y2I9 924 aa4.01□□□□□ -1.77
SRP54-209ENST00000555746 LRCH1Q9Y2L9 728 aa4.01□□□□□ -1.77
SRP54-209ENST00000555746 MRPS17Q9Y2R5 130 aaKnown RBP4.01□□□□□ -1.77
SRP54-209ENST00000555746 PCDHGB2Q9Y5G2 931 aa4.01□□□□□ -1.77
SRP54-209ENST00000555746 GOLGA3Q08378 1498 aa4□□□□□ -1.77
SRP54-209ENST00000555746 WDR27A2RRH5 827 aa4□□□□□ -1.77
SRP54-209ENST00000555746 PLEKHD1A6NEE1 506 aa4□□□□□ -1.77
SRP54-209ENST00000555746 IFRD1O00458 451 aaPredicted RBP4□□□□□ -1.77
SRP54-209ENST00000555746 MATN3O15232 486 aa4□□□□□ -1.77
SRP54-209ENST00000555746 CD3EAPO15446 510 aaKnown RBP4□□□□□ -1.77
SRP54-209ENST00000555746 EIF3JO75822 258 aaKnown RBP4□□□□□ -1.77
SRP54-209ENST00000555746 ITGAMP11215 1152 aa4□□□□□ -1.77
SRP54-209ENST00000555746 GABRB3P28472 473 aa4□□□□□ -1.77
SRP54-209ENST00000555746 TECP42680 631 aa4□□□□□ -1.77
SRP54-209ENST00000555746 PDE6CP51160 858 aa4□□□□□ -1.77
SRP54-209ENST00000555746 BCAT1P54687 386 aa4□□□□□ -1.77
SRP54-209ENST00000555746 TNFAIP2Q03169 654 aa4□□□□□ -1.77
SRP54-209ENST00000555746 PTPRRQ15256 657 aa4□□□□□ -1.77
SRP54-209ENST00000555746 PTPAQ15257 358 aa4□□□□□ -1.77
SRP54-209ENST00000555746 EZH2Q15910 746 aaKnown RBP4□□□□□ -1.77
SRP54-209ENST00000555746 CERCAMQ5T4B2 595 aa4□□□□□ -1.77
SRP54-209ENST00000555746 RRAGBQ5VZM2 374 aa4□□□□□ -1.77
SRP54-209ENST00000555746 MZT2AQ6P582 158 aa4□□□□□ -1.77
SRP54-209ENST00000555746 CRIP3Q6Q6R5 217 aa4□□□□□ -1.77
SRP54-209ENST00000555746 KIAA0408Q6ZU52 694 aa4□□□□□ -1.77
SRP54-209ENST00000555746 KCTD20Q7Z5Y7 419 aa4□□□□□ -1.77
SRP54-209ENST00000555746 SLC15A3Q8IY34 581 aa4□□□□□ -1.77
SRP54-209ENST00000555746 SYTL1Q8IYJ3 562 aa4□□□□□ -1.77
SRP54-209ENST00000555746 TXLNBQ8N3L3 684 aa4□□□□□ -1.77
SRP54-209ENST00000555746 B3GALNT2Q8NCR0 500 aa4□□□□□ -1.77
SRP54-209ENST00000555746 MYCBPAPQ8TBZ2 947 aa4□□□□□ -1.77
SRP54-209ENST00000555746 MORC4Q8TE76 937 aa4□□□□□ -1.77
SRP54-209ENST00000555746 LINC00476Q8WZB0 136 aa4□□□□□ -1.77
SRP54-209ENST00000555746 PPP2R3CQ969Q6 453 aa4□□□□□ -1.77
SRP54-209ENST00000555746 PGBD1Q96JS3 809 aa4□□□□□ -1.77
SRP54-209ENST00000555746 ZNF668Q96K58 619 aaPredicted RBP4□□□□□ -1.77
SRP54-209ENST00000555746 SNX27Q96L92 541 aa4□□□□□ -1.77
SRP54-209ENST00000555746 FAM227BQ96M60 508 aa4□□□□□ -1.77
SRP54-209ENST00000555746 ACTRT3Q9BYD9 372 aa4□□□□□ -1.77
SRP54-209ENST00000555746 TPSD1Q9BZJ3 242 aa4□□□□□ -1.77
SRP54-209ENST00000555746 MMRN2Q9H8L6 949 aa4□□□□□ -1.77
SRP54-209ENST00000555746 NECTIN3Q9NQS3 549 aa4□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 66.4 ms