RNA–Protein interactions for RNA: ENST00000555709.6

MTHFD1-211, Transcript of methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1, humanhuman

TSL 2

Gene MTHFD1, Length 803 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFD1-211ENST00000555709 C12orf29Q8N999 325 aa12.41□□□□□ -0.42
MTHFD1-211ENST00000555709 KDF1Q8NAX2 398 aaPredicted RBP12.41□□□□□ -0.42
MTHFD1-211ENST00000555709 SLC30A5Q8TAD4 765 aa12.41□□□□□ -0.42
MTHFD1-211ENST00000555709 LNX1Q8TBB1 728 aaPredicted RBP12.41□□□□□ -0.42
MTHFD1-211ENST00000555709 ZNF606Q8WXB4 792 aa12.41□□□□□ -0.42
MTHFD1-211ENST00000555709 TMEM209Q96SK2 561 aa12.41□□□□□ -0.42
MTHFD1-211ENST00000555709 AGPAT1Q99943 283 aa12.41□□□□□ -0.42
MTHFD1-211ENST00000555709 LPIN3Q9BQK8 851 aa12.41□□□□□ -0.42
MTHFD1-211ENST00000555709 OXCT2Q9BYC2 517 aaPredicted RBP12.41□□□□□ -0.42
MTHFD1-211ENST00000555709 ZCWPW1Q9H0M4 648 aa12.41□□□□□ -0.42
MTHFD1-211ENST00000555709 NHEJ1Q9H9Q4 299 aaPredicted RBP12.41□□□□□ -0.42
MTHFD1-211ENST00000555709 WDR6Q9NNW5 1121 aaKnown RBP12.41□□□□□ -0.42
MTHFD1-211ENST00000555709 FAM49BQ9NUQ9 324 aa12.41□□□□□ -0.42
MTHFD1-211ENST00000555709 KIAA1257Q9ULG3 409 aa12.41□□□□□ -0.42
MTHFD1-211ENST00000555709 PCDHGC3Q9UN70 934 aa12.41□□□□□ -0.42
MTHFD1-211ENST00000555709 WDR3Q9UNX4 943 aaKnown RBP eCLIP12.41□□□□□ -0.42
MTHFD1-211ENST00000555709 MTF2Q9Y483 593 aaPredicted RBP12.41□□□□□ -0.42
MTHFD1-211ENST00000555709 BACE2Q9Y5Z0 518 aa12.41□□□□□ -0.42
MTHFD1-211ENST00000555709 KANSL1LA0AUZ9 987 aa12.4□□□□□ -0.42
MTHFD1-211ENST00000555709 MYBPHLA2RUH7 354 aa12.4□□□□□ -0.42
MTHFD1-211ENST00000555709 OR6C75A6NL08 312 aa12.4□□□□□ -0.42
MTHFD1-211ENST00000555709 ANHXE9PGG2 379 aa12.4□□□□□ -0.42
MTHFD1-211ENST00000555709 H7C4K7 107 aa12.4□□□□□ -0.42
MTHFD1-211ENST00000555709 DDX3XO00571 662 aaKnown RBP eCLIP12.4□□□□□ -0.421e-15■■■■□ 20.8
MTHFD1-211ENST00000555709 ARHGAP6O43182 974 aa12.4□□□□□ -0.42
MTHFD1-211ENST00000555709 GDF9O60383 454 aa12.4□□□□□ -0.42
MTHFD1-211ENST00000555709 LRP3O75074 770 aa12.4□□□□□ -0.42
MTHFD1-211ENST00000555709 URODP06132 367 aa12.4□□□□□ -0.42
MTHFD1-211ENST00000555709 CCDC130P13994 396 aa12.4□□□□□ -0.42
MTHFD1-211ENST00000555709 GBP2P32456 591 aaPredicted RBP12.4□□□□□ -0.42
MTHFD1-211ENST00000555709 DEKP35659 375 aaKnown RBP12.4□□□□□ -0.42
MTHFD1-211ENST00000555709 KIF11P52732 1056 aa12.4□□□□□ -0.42
MTHFD1-211ENST00000555709 BMS1Q14692 1282 aaKnown RBP12.4□□□□□ -0.42
MTHFD1-211ENST00000555709 STILQ15468 1287 aa12.4□□□□□ -0.42
MTHFD1-211ENST00000555709 PSMD5Q16401 504 aa12.4□□□□□ -0.42
MTHFD1-211ENST00000555709 CTXN3Q4LDR2 81 aa12.4□□□□□ -0.42
MTHFD1-211ENST00000555709 MDH1BQ5I0G3 518 aa12.4□□□□□ -0.42
MTHFD1-211ENST00000555709 TSSK4Q6SA08 328 aa12.4□□□□□ -0.42
MTHFD1-211ENST00000555709 PRSS55Q6UWB4 352 aaPredicted RBP12.4□□□□□ -0.42
MTHFD1-211ENST00000555709 LRRTM3Q86VH5 581 aa12.4□□□□□ -0.42
MTHFD1-211ENST00000555709 GLYCTKQ8IVS8 523 aa12.4□□□□□ -0.42
MTHFD1-211ENST00000555709 CCDC170Q8IYT3 715 aa12.4□□□□□ -0.42
MTHFD1-211ENST00000555709 FUKQ8N0W3 1084 aa12.4□□□□□ -0.42
MTHFD1-211ENST00000555709 CMASQ8NFW8 434 aaPredicted RBP12.4□□□□□ -0.42
MTHFD1-211ENST00000555709 MYCBPAPQ8TBZ2 947 aa12.4□□□□□ -0.42
MTHFD1-211ENST00000555709 CCDC42Q96M95 316 aa12.4□□□□□ -0.42
MTHFD1-211ENST00000555709 HEXIM2Q96MH2 286 aaKnown RBP12.4□□□□□ -0.42
MTHFD1-211ENST00000555709 ZNF830Q96NB3 372 aaPredicted RBP12.4□□□□□ -0.42
MTHFD1-211ENST00000555709 PCDHB18PQ96TA0 734 aa12.4□□□□□ -0.42
MTHFD1-211ENST00000555709 RHOBTB2Q9BYZ6 727 aa12.4□□□□□ -0.42
MTHFD1-211ENST00000555709 DNAI2Q9GZS0 605 aa12.4□□□□□ -0.42
MTHFD1-211ENST00000555709 TMLHEQ9NVH6 421 aa12.4□□□□□ -0.42
MTHFD1-211ENST00000555709 A0A087X0T9 212 aa12.39□□□□□ -0.43
MTHFD1-211ENST00000555709 TM4SF5O14894 197 aa12.39□□□□□ -0.43
MTHFD1-211ENST00000555709 ZNF263O14978 683 aa12.39□□□□□ -0.43
MTHFD1-211ENST00000555709 MED7O43513 233 aa12.39□□□□□ -0.43
MTHFD1-211ENST00000555709 LILRB3O75022 631 aa12.39□□□□□ -0.43
MTHFD1-211ENST00000555709 MICAL2O94851 1124 aa12.39□□□□□ -0.43
MTHFD1-211ENST00000555709 LCA5LO95447 670 aa12.39□□□□□ -0.43
MTHFD1-211ENST00000555709 CYP1A1P04798 512 aaPredicted RBP12.39□□□□□ -0.43
MTHFD1-211ENST00000555709 OR4Q2P0C623 313 aa12.39□□□□□ -0.43
MTHFD1-211ENST00000555709 FAM228BP0C875 321 aa12.39□□□□□ -0.43
MTHFD1-211ENST00000555709 CDH5P33151 784 aaPredicted RBP12.39□□□□□ -0.43
MTHFD1-211ENST00000555709 CLCN4P51793 760 aa12.39□□□□□ -0.43
MTHFD1-211ENST00000555709 TSPY1Q01534 308 aa12.39□□□□□ -0.43
MTHFD1-211ENST00000555709 HTR4Q13639 388 aa12.39□□□□□ -0.43
MTHFD1-211ENST00000555709 CNGA2Q16280 664 aa12.39□□□□□ -0.43
MTHFD1-211ENST00000555709 SLC18A3Q16572 532 aa12.39□□□□□ -0.43
MTHFD1-211ENST00000555709 GOLGA7BQ2TAP0 167 aa12.39□□□□□ -0.43
MTHFD1-211ENST00000555709 PKDCCQ504Y2 493 aa12.39□□□□□ -0.43
MTHFD1-211ENST00000555709 PPP1R26Q5T8A7 1209 aaPredicted RBP12.39□□□□□ -0.43
MTHFD1-211ENST00000555709 SLC8B1Q6J4K2 584 aa12.39□□□□□ -0.43
MTHFD1-211ENST00000555709 LCLAT1Q6UWP7 414 aa12.39□□□□□ -0.43
MTHFD1-211ENST00000555709 UNQ6494/PRO21346Q6UXR6 183 aa12.39□□□□□ -0.43
MTHFD1-211ENST00000555709 TRIM72Q6ZMU5 477 aa12.39□□□□□ -0.43
MTHFD1-211ENST00000555709 PRR23CQ6ZRP0 262 aa12.39□□□□□ -0.43
MTHFD1-211ENST00000555709 PAQR9Q6ZVX9 377 aa12.39□□□□□ -0.43
MTHFD1-211ENST00000555709 FAM35AQ86V20 835 aa12.39□□□□□ -0.43
MTHFD1-211ENST00000555709 SLC2A14Q8TDB8 520 aa12.39□□□□□ -0.43
MTHFD1-211ENST00000555709 MYLPFQ96A32 169 aa12.39□□□□□ -0.43
MTHFD1-211ENST00000555709 PCED1BQ96HM7 432 aa12.39□□□□□ -0.43
MTHFD1-211ENST00000555709 SHDQ96IW2 340 aa12.39□□□□□ -0.43
MTHFD1-211ENST00000555709 HNRNPABQ99729 332 aaKnown RBP12.39□□□□□ -0.43
MTHFD1-211ENST00000555709 B3GNT5Q9BYG0 378 aa12.39□□□□□ -0.43
MTHFD1-211ENST00000555709 OSBPL6Q9BZF3 934 aa12.39□□□□□ -0.43
MTHFD1-211ENST00000555709 PRMT8Q9NR22 394 aaPredicted RBP12.39□□□□□ -0.43
MTHFD1-211ENST00000555709 SEMA4GQ9NTN9 838 aa12.39□□□□□ -0.43
MTHFD1-211ENST00000555709 SPTLC3Q9NUV7 552 aa12.39□□□□□ -0.43
MTHFD1-211ENST00000555709 ADAMTS1Q9UHI8 967 aa12.39□□□□□ -0.43
MTHFD1-211ENST00000555709 GTF3C4Q9UKN8 822 aa12.39□□□□□ -0.43
MTHFD1-211ENST00000555709 TSPAN16Q9UKR8 245 aa12.39□□□□□ -0.43
MTHFD1-211ENST00000555709 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP12.39□□□□□ -0.43
MTHFD1-211ENST00000555709 MYH10P35580 1976 aa12.39□□□□□ -0.43
MTHFD1-211ENST00000555709 CLUHO75153 1309 aa12.38□□□□□ -0.43
MTHFD1-211ENST00000555709 HELZ2Q9BYK8 2649 aaKnown RBP12.38□□□□□ -0.43
MTHFD1-211ENST00000555709 EIF3CLB5ME19 914 aaKnown RBP12.38□□□□□ -0.43
MTHFD1-211ENST00000555709 M0QYV0 167 aa12.38□□□□□ -0.43
MTHFD1-211ENST00000555709 ADAM12O43184 909 aa12.38□□□□□ -0.43
MTHFD1-211ENST00000555709 NRDCO43847 1150 aa12.38□□□□□ -0.43
MTHFD1-211ENST00000555709 AKR1B10O60218 316 aa12.38□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms