RNA–Protein interactions for RNA: ENST00000555543.1

VTI1B-205, Transcript of vesicle transport through interaction with t-SNAREs 1B, humanhuman

TSL 2

Gene VTI1B, Length 718 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1B-205ENST00000555543 AFPP02771 609 aaKnown RBP21.67■■□□□ 1.06
VTI1B-205ENST00000555543 RPS9P46781 194 aaKnown RBP21.67■■□□□ 1.06
VTI1B-205ENST00000555543 RUNX3Q13761 415 aa21.67■■□□□ 1.06
VTI1B-205ENST00000555543 SNX30Q5VWJ9 437 aa21.67■■□□□ 1.06
VTI1B-205ENST00000555543 IRF2BP1Q8IU81 584 aa21.67■■□□□ 1.06
VTI1B-205ENST00000555543 C1orf210Q8IVY1 113 aa21.67■■□□□ 1.06
VTI1B-205ENST00000555543 MAML2Q8IZL2 1156 aaPredicted RBP21.67■■□□□ 1.06
VTI1B-205ENST00000555543 OSCP1Q8WVF1 389 aa21.67■■□□□ 1.06
VTI1B-205ENST00000555543 CNOT6LQ96LI5 555 aaKnown RBP21.67■■□□□ 1.06
VTI1B-205ENST00000555543 NT5C1BQ96P26 610 aa21.67■■□□□ 1.06
VTI1B-205ENST00000555543 GBP4Q96PP9 640 aa21.67■■□□□ 1.06
VTI1B-205ENST00000555543 DUSP16Q9BY84 665 aa21.67■■□□□ 1.06
VTI1B-205ENST00000555543 IRF2BPLQ9H1B7 796 aa21.67■■□□□ 1.06
VTI1B-205ENST00000555543 CCSER2Q9H7U1 834 aa21.67■■□□□ 1.06
VTI1B-205ENST00000555543 COMMD8Q9NX08 183 aa21.67■■□□□ 1.06
VTI1B-205ENST00000555543 CYP26A1O43174 497 aa21.66■■□□□ 1.06
VTI1B-205ENST00000555543 COCHO43405 550 aa21.66■■□□□ 1.06
VTI1B-205ENST00000555543 CCDC192P0DO97 292 aa21.66■■□□□ 1.06
VTI1B-205ENST00000555543 CHRNB1P11230 501 aa21.66■■□□□ 1.06
VTI1B-205ENST00000555543 ACO1P21399 889 aaKnown RBP21.66■■□□□ 1.06
VTI1B-205ENST00000555543 TBXAS1P24557 533 aaPredicted RBP21.66■■□□□ 1.06
VTI1B-205ENST00000555543 PON2Q15165 354 aa21.66■■□□□ 1.06
VTI1B-205ENST00000555543 PDGFRLQ15198 375 aa21.66■■□□□ 1.06
VTI1B-205ENST00000555543 ARHGAP17Q68EM7 881 aa21.66■■□□□ 1.06
VTI1B-205ENST00000555543 ARHGEF19Q8IW93 802 aa21.66■■□□□ 1.06
VTI1B-205ENST00000555543 PPM1KQ8N3J5 372 aa21.66■■□□□ 1.06
VTI1B-205ENST00000555543 ZFRQ96KR1 1074 aaKnown RBP21.66■■□□□ 1.06
VTI1B-205ENST00000555543 DNAI2Q9GZS0 605 aa21.66■■□□□ 1.06
VTI1B-205ENST00000555543 FBXO44Q9H4M3 255 aa21.66■■□□□ 1.06
VTI1B-205ENST00000555543 PNPLA8Q9NP80 782 aa21.66■■□□□ 1.06
VTI1B-205ENST00000555543 SPATA6Q9NWH7 488 aaPredicted RBP21.66■■□□□ 1.06
VTI1B-205ENST00000555543 DUS2Q9NX74 493 aaKnown RBP21.66■■□□□ 1.06
VTI1B-205ENST00000555543 SCAMP3O14828 347 aaKnown RBP21.65■■□□□ 1.06
VTI1B-205ENST00000555543 NCAM2O15394 837 aa21.65■■□□□ 1.06
VTI1B-205ENST00000555543 FGFR1OPO95684 399 aaKnown RBP21.65■■□□□ 1.06
VTI1B-205ENST00000555543 MBL2P11226 248 aaPredicted RBP21.65■■□□□ 1.06
VTI1B-205ENST00000555543 HOXD11P31277 338 aaPredicted RBP21.65■■□□□ 1.06
VTI1B-205ENST00000555543 MAGEA9P43362 315 aa21.65■■□□□ 1.06
VTI1B-205ENST00000555543 KIF11P52732 1056 aa21.65■■□□□ 1.06
VTI1B-205ENST00000555543 YWHAEP62258 255 aaKnown RBP21.65■■□□□ 1.06
VTI1B-205ENST00000555543 EML3Q32P44 896 aa21.65■■□□□ 1.06
VTI1B-205ENST00000555543 NAIF1Q69YI7 327 aaPredicted RBP21.65■■□□□ 1.06
VTI1B-205ENST00000555543 TTC30AQ86WT1 665 aa21.65■■□□□ 1.06
VTI1B-205ENST00000555543 INTS2Q9H0H0 1204 aaKnown RBP21.65■■□□□ 1.06
VTI1B-205ENST00000555543 LINC00597Q9H2U6 94 aa21.65■■□□□ 1.06
VTI1B-205ENST00000555543 CHRDQ9H2X0 955 aa21.65■■□□□ 1.06
VTI1B-205ENST00000555543 LMAN1LQ9HAT1 526 aa21.65■■□□□ 1.06
VTI1B-205ENST00000555543 RBM12Q9NTZ6 932 aaKnown RBP21.65■■□□□ 1.06
VTI1B-205ENST00000555543 OSER1Q9NX31 292 aa21.65■■□□□ 1.06
VTI1B-205ENST00000555543 SCML2Q9UQR0 700 aa21.65■■□□□ 1.06
VTI1B-205ENST00000555543 IFNAR2P48551 515 aa21.64■■□□□ 1.05
VTI1B-205ENST00000555543 TUBP50607 506 aa21.64■■□□□ 1.05
VTI1B-205ENST00000555543 CETN1Q12798 172 aa21.64■■□□□ 1.05
VTI1B-205ENST00000555543 MTAPQ13126 283 aa21.64■■□□□ 1.05
VTI1B-205ENST00000555543 GOLGA7BQ2TAP0 167 aa21.64■■□□□ 1.05
VTI1B-205ENST00000555543 HECTD3Q5T447 861 aa21.64■■□□□ 1.05
VTI1B-205ENST00000555543 C1orf228Q6PIY5 440 aa21.64■■□□□ 1.05
VTI1B-205ENST00000555543 RRAGAQ7L523 313 aa21.64■■□□□ 1.05
VTI1B-205ENST00000555543 EHBP1Q8NDI1 1231 aa21.64■■□□□ 1.05
VTI1B-205ENST00000555543 ECT2Q9H8V3 914 aa21.64■■□□□ 1.05
VTI1B-205ENST00000555543 CFAP97Q9P2B7 532 aa21.64■■□□□ 1.05
VTI1B-205ENST00000555543 ZFHX2Q9C0A1 2572 aaPredicted RBP21.63■■□□□ 1.05
VTI1B-205ENST00000555543 MRE11P49959 708 aa21.63■■□□□ 1.05
VTI1B-205ENST00000555543 GAS6Q14393 721 aa21.63■■□□□ 1.05
VTI1B-205ENST00000555543 TMEM270Q6UE05 265 aa21.63■■□□□ 1.05
VTI1B-205ENST00000555543 ALYREFQ86V81 257 aaKnown RBP21.63■■□□□ 1.05
VTI1B-205ENST00000555543 ANKRD52Q8NB46 1076 aa21.63■■□□□ 1.05
VTI1B-205ENST00000555543 ATP2A3Q93084 1043 aa21.63■■□□□ 1.05
VTI1B-205ENST00000555543 KREMEN1Q96MU8 473 aa21.63■■□□□ 1.05
VTI1B-205ENST00000555543 NMUR1Q9HB89 426 aa21.63■■□□□ 1.05
VTI1B-205ENST00000555543 TLR8Q9NR97 1041 aaKnown RBP21.63■■□□□ 1.05
VTI1B-205ENST00000555543 TSPAN16Q9UKR8 245 aa21.63■■□□□ 1.05
VTI1B-205ENST00000555543 WDR87Q6ZQQ6 2873 aa21.62■■□□□ 1.05
VTI1B-205ENST00000555543 RNF225M0QZC1 329 aaPredicted RBP21.62■■□□□ 1.05
VTI1B-205ENST00000555543 TULP2O00295 520 aa21.62■■□□□ 1.05
VTI1B-205ENST00000555543 LAMTOR5O43504 91 aa21.62■■□□□ 1.05
VTI1B-205ENST00000555543 TLR5O60602 858 aa21.62■■□□□ 1.05
VTI1B-205ENST00000555543 CALCAP01258 141 aa21.62■■□□□ 1.05
VTI1B-205ENST00000555543 SP9P0CG40 484 aa21.62■■□□□ 1.05
VTI1B-205ENST00000555543 CD19P15391 556 aa21.62■■□□□ 1.05
VTI1B-205ENST00000555543 GJA4P35212 333 aa21.62■■□□□ 1.05
VTI1B-205ENST00000555543 NBL1P41271 181 aa21.62■■□□□ 1.05
VTI1B-205ENST00000555543 CCINQ13939 588 aa21.62■■□□□ 1.05
VTI1B-205ENST00000555543 SGO2Q562F6 1265 aa21.62■■□□□ 1.05
VTI1B-205ENST00000555543 Q6ZS52 159 aa21.62■■□□□ 1.05
VTI1B-205ENST00000555543 PIGZQ86VD9 579 aa21.62■■□□□ 1.05
VTI1B-205ENST00000555543 CREBRFQ8IUR6 639 aa21.62■■□□□ 1.05
VTI1B-205ENST00000555543 CPA6Q8N4T0 437 aa21.62■■□□□ 1.05
VTI1B-205ENST00000555543 TFAP2BQ92481 460 aa21.62■■□□□ 1.05
VTI1B-205ENST00000555543 WBP2Q969T9 261 aa21.62■■□□□ 1.05
VTI1B-205ENST00000555543 ZSWIM1Q9BR11 485 aa21.62■■□□□ 1.05
VTI1B-205ENST00000555543 PCDHB4Q9Y5E5 795 aa21.62■■□□□ 1.05
VTI1B-205ENST00000555543 USP3Q9Y6I4 520 aa21.62■■□□□ 1.05
VTI1B-205ENST00000555543 A0A1W2PQH9 124 aa21.61■■□□□ 1.05
VTI1B-205ENST00000555543 O00370 1275 aa21.61■■□□□ 1.05
VTI1B-205ENST00000555543 TBX18O95935 607 aa21.61■■□□□ 1.05
VTI1B-205ENST00000555543 GCNT1Q02742 428 aa21.61■■□□□ 1.05
VTI1B-205ENST00000555543 CCDC186Q7Z3E2 898 aa21.61■■□□□ 1.05
VTI1B-205ENST00000555543 SCD5Q86SK9 330 aa21.61■■□□□ 1.05
VTI1B-205ENST00000555543 CRACR2AQ9BSW2 395 aa21.61■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms