RNA–Protein interactions for RNA: ENST00000555254.5

PSEN1-212, Transcript of presenilin 1, humanhuman

TSL 3

Gene PSEN1, Length 754 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-212ENST00000555254 CDC23Q9UJX2 597 aa18.54■□□□□ 0.56
PSEN1-212ENST00000555254 IRAK3Q9Y616 596 aa18.54■□□□□ 0.56
PSEN1-212ENST00000555254 SIGLEC16A6NMB1 481 aa18.53■□□□□ 0.56
PSEN1-212ENST00000555254 CLDN5O00501 218 aa18.53■□□□□ 0.56
PSEN1-212ENST00000555254 SPOPO43791 374 aa18.53■□□□□ 0.56
PSEN1-212ENST00000555254 LILRB3O75022 631 aa18.53■□□□□ 0.56
PSEN1-212ENST00000555254 TBX10O75333 385 aa18.53■□□□□ 0.56
PSEN1-212ENST00000555254 ERBB2P04626 1255 aa18.53■□□□□ 0.56
PSEN1-212ENST00000555254 SRGAP2BP0DMP2 458 aa18.53■□□□□ 0.56
PSEN1-212ENST00000555254 KRT3P12035 628 aa18.53■□□□□ 0.56
PSEN1-212ENST00000555254 RPL17P18621 184 aaKnown RBP18.53■□□□□ 0.56
PSEN1-212ENST00000555254 FGFR3P22607 806 aa18.53■□□□□ 0.56
PSEN1-212ENST00000555254 SLC1A1P43005 524 aa18.53■□□□□ 0.56
PSEN1-212ENST00000555254 COL19A1Q14993 1142 aa18.53■□□□□ 0.56
PSEN1-212ENST00000555254 NFE2Q16621 373 aaPredicted RBP18.53■□□□□ 0.56
PSEN1-212ENST00000555254 RTP2Q5QGT7 225 aa18.53■□□□□ 0.56
PSEN1-212ENST00000555254 VARS2Q5ST30 1063 aaKnown RBP18.53■□□□□ 0.56
PSEN1-212ENST00000555254 FAM171BQ6P995 826 aa18.53■□□□□ 0.56
PSEN1-212ENST00000555254 ANKS3Q6ZW76 656 aa18.53■□□□□ 0.56
PSEN1-212ENST00000555254 TMEM110Q86TL2 294 aa18.53■□□□□ 0.56
PSEN1-212ENST00000555254 FAM35AQ86V20 835 aa18.53■□□□□ 0.56
PSEN1-212ENST00000555254 SPATA2LQ8IUW3 424 aaPredicted RBP18.53■□□□□ 0.56
PSEN1-212ENST00000555254 UBL4BQ8N7F7 174 aa18.53■□□□□ 0.56
PSEN1-212ENST00000555254 SMARCD1Q96GM5 515 aa18.53■□□□□ 0.56
PSEN1-212ENST00000555254 RTP3Q9BQQ7 232 aa18.53■□□□□ 0.56
PSEN1-212ENST00000555254 APOL5Q9BWW9 433 aa18.53■□□□□ 0.56
PSEN1-212ENST00000555254 LRRC4Q9HBW1 653 aa18.53■□□□□ 0.56
PSEN1-212ENST00000555254 SNX12Q9UMY4 172 aa18.53■□□□□ 0.56
PSEN1-212ENST00000555254 ALG6Q9Y672 507 aa18.53■□□□□ 0.56
PSEN1-212ENST00000555254 MIF4GDA9UHW6 222 aaKnown RBP18.52■□□□□ 0.56
PSEN1-212ENST00000555254 TEX28O15482 410 aa18.52■□□□□ 0.56
PSEN1-212ENST00000555254 GLP2RO95838 553 aa18.52■□□□□ 0.56
PSEN1-212ENST00000555254 PLA2G4AP47712 749 aa18.52■□□□□ 0.56
PSEN1-212ENST00000555254 GSCP56915 257 aaPredicted RBP18.52■□□□□ 0.56
PSEN1-212ENST00000555254 WHAMMP3Q1A5X7 153 aa18.52■□□□□ 0.56
PSEN1-212ENST00000555254 LEXMQ3ZCV2 418 aa18.52■□□□□ 0.56
PSEN1-212ENST00000555254 PMF1Q6P1K2 205 aa18.52■□□□□ 0.56
PSEN1-212ENST00000555254 ALYREFQ86V81 257 aaKnown RBP18.52■□□□□ 0.56
PSEN1-212ENST00000555254 XYLT1Q86Y38 959 aa18.52■□□□□ 0.56
PSEN1-212ENST00000555254 GADD45GIP1Q8TAE8 222 aaPredicted RBP18.52■□□□□ 0.56
PSEN1-212ENST00000555254 MYLPFQ96A32 169 aa18.52■□□□□ 0.56
PSEN1-212ENST00000555254 MCRS1Q96EZ8 462 aa18.52■□□□□ 0.56
PSEN1-212ENST00000555254 PCED1BQ96HM7 432 aa18.52■□□□□ 0.56
PSEN1-212ENST00000555254 UHRF1Q96T88 793 aaPredicted RBP18.52■□□□□ 0.56
PSEN1-212ENST00000555254 UBXN6Q9BZV1 441 aa18.52■□□□□ 0.56
PSEN1-212ENST00000555254 ZCWPW1Q9H0M4 648 aa18.52■□□□□ 0.56
PSEN1-212ENST00000555254 KRT82Q9NSB4 513 aa18.52■□□□□ 0.56
PSEN1-212ENST00000555254 CLEC1BQ9P126 229 aa18.52■□□□□ 0.56
PSEN1-212ENST00000555254 HCFC2Q9Y5Z7 792 aa18.52■□□□□ 0.56
PSEN1-212ENST00000555254 TMEM191CA6NGB0 347 aa18.51■□□□□ 0.55
PSEN1-212ENST00000555254 E5RJQ4 531 aa18.51■□□□□ 0.55
PSEN1-212ENST00000555254 PROSCO94903 275 aa18.51■□□□□ 0.55
PSEN1-212ENST00000555254 EPCAMP16422 314 aa18.51■□□□□ 0.55
PSEN1-212ENST00000555254 MAP3K7CLP57077 242 aa18.51■□□□□ 0.55
PSEN1-212ENST00000555254 CKAP4Q07065 602 aaKnown RBP18.51■□□□□ 0.55
PSEN1-212ENST00000555254 FAM102AQ5T9C2 384 aaPredicted RBP18.51■□□□□ 0.55
PSEN1-212ENST00000555254 NT5DC3Q86UY8 548 aa18.51■□□□□ 0.55
PSEN1-212ENST00000555254 SIX6OS1Q8N1H7 587 aa18.51■□□□□ 0.55
PSEN1-212ENST00000555254 MNS1Q8NEH6 495 aa18.51■□□□□ 0.55
PSEN1-212ENST00000555254 OR10T2Q8NGX3 314 aa18.51■□□□□ 0.55
PSEN1-212ENST00000555254 KCTD13Q8WZ19 329 aa18.51■□□□□ 0.55
PSEN1-212ENST00000555254 PBKQ96KB5 322 aa18.51■□□□□ 0.55
PSEN1-212ENST00000555254 MCEEQ96PE7 176 aa18.51■□□□□ 0.55
PSEN1-212ENST00000555254 C1QTNF1Q9BXJ1 281 aa18.51■□□□□ 0.55
PSEN1-212ENST00000555254 TLR10Q9BXR5 811 aa18.51■□□□□ 0.55
PSEN1-212ENST00000555254 ABCB6Q9NP58 842 aa18.51■□□□□ 0.55
PSEN1-212ENST00000555254 CD207Q9UJ71 328 aa18.51■□□□□ 0.55
PSEN1-212ENST00000555254 MYO7AQ13402 2215 aa18.5■□□□□ 0.55
PSEN1-212ENST00000555254 SPDYE4A6NLX3 237 aa18.5■□□□□ 0.55
PSEN1-212ENST00000555254 FANCGO15287 622 aa18.5■□□□□ 0.55
PSEN1-212ENST00000555254 FBXO21O94952 628 aa18.5■□□□□ 0.55
PSEN1-212ENST00000555254 ADH1AP07327 375 aa18.5■□□□□ 0.55
PSEN1-212ENST00000555254 SPATA31D3P0C874 917 aa18.5■□□□□ 0.55
PSEN1-212ENST00000555254 LCP1P13796 627 aa18.5■□□□□ 0.55
PSEN1-212ENST00000555254 COMTP21964 271 aa18.5■□□□□ 0.55
PSEN1-212ENST00000555254 MAN1A1P33908 653 aa18.5■□□□□ 0.55
PSEN1-212ENST00000555254 PAFAH1B1P43034 410 aa18.5■□□□□ 0.55
PSEN1-212ENST00000555254 SSR1P43307 286 aaKnown RBP18.5■□□□□ 0.55
PSEN1-212ENST00000555254 DNA2P51530 1060 aa18.5■□□□□ 0.55
PSEN1-212ENST00000555254 SLC6A3Q01959 620 aa18.5■□□□□ 0.55
PSEN1-212ENST00000555254 SMARCB1Q12824 385 aa18.5■□□□□ 0.55
PSEN1-212ENST00000555254 MRPL58Q14197 206 aaKnown RBP18.5■□□□□ 0.55
PSEN1-212ENST00000555254 PIGHQ14442 188 aaPredicted RBP18.5■□□□□ 0.55
PSEN1-212ENST00000555254 PSMD5Q16401 504 aa18.5■□□□□ 0.55
PSEN1-212ENST00000555254 CCDC181Q5TID7 509 aa18.5■□□□□ 0.55
PSEN1-212ENST00000555254 PTCRAQ6ISU1 281 aaPredicted RBP18.5■□□□□ 0.55
PSEN1-212ENST00000555254 SPATA31D4Q6ZUB0 917 aa18.5■□□□□ 0.55
PSEN1-212ENST00000555254 PAQR9Q6ZVX9 377 aa18.5■□□□□ 0.55
PSEN1-212ENST00000555254 PIGZQ86VD9 579 aa18.5■□□□□ 0.55
PSEN1-212ENST00000555254 CEP112Q8N8E3 955 aa18.5■□□□□ 0.55
PSEN1-212ENST00000555254 SLC22A17Q8WUG5 538 aa18.5■□□□□ 0.55
PSEN1-212ENST00000555254 CASP10Q92851 521 aa18.5■□□□□ 0.55
PSEN1-212ENST00000555254 BTBD6Q96KE9 485 aa18.5■□□□□ 0.55
PSEN1-212ENST00000555254 OSBPL9Q96SU4 736 aa18.5■□□□□ 0.55
PSEN1-212ENST00000555254 L2HGDHQ9H9P8 463 aa18.5■□□□□ 0.55
PSEN1-212ENST00000555254 RXFP1Q9HBX9 757 aa18.5■□□□□ 0.55
PSEN1-212ENST00000555254 DMAP1Q9NPF5 467 aaPredicted RBP18.5■□□□□ 0.55
PSEN1-212ENST00000555254 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP18.5■□□□□ 0.55
PSEN1-212ENST00000555254 RNF14Q9UBS8 474 aa18.5■□□□□ 0.55
PSEN1-212ENST00000555254 SBDSQ9Y3A5 250 aaKnown RBP eCLIP18.5■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms