RNA–Protein interactions for RNA: ENST00000555213.1

SHMT2-218, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 3

Gene SHMT2, Length 611 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-218ENST00000555213 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP11.51□□□□□ -0.57
SHMT2-218ENST00000555213 DNMT3BQ9UBC3 853 aaKnown RBP11.51□□□□□ -0.57
SHMT2-218ENST00000555213 PRKAG3Q9UGI9 489 aa11.51□□□□□ -0.57
SHMT2-218ENST00000555213 PCDHA13Q9Y5I0 950 aa11.51□□□□□ -0.57
SHMT2-218ENST00000555213 PJA2O43164 708 aa11.5□□□□□ -0.57
SHMT2-218ENST00000555213 NRDCO43847 1150 aa11.5□□□□□ -0.57
SHMT2-218ENST00000555213 MICAL2O94851 1124 aa11.5□□□□□ -0.57
SHMT2-218ENST00000555213 CFHP08603 1231 aa11.5□□□□□ -0.57
SHMT2-218ENST00000555213 CCDC175P0C221 793 aa11.5□□□□□ -0.57
SHMT2-218ENST00000555213 CYP11B1P15538 503 aa11.5□□□□□ -0.57
SHMT2-218ENST00000555213 GBP2P32456 591 aaPredicted RBP11.5□□□□□ -0.57
SHMT2-218ENST00000555213 CYLC1P35663 651 aaPredicted RBP11.5□□□□□ -0.57
SHMT2-218ENST00000555213 SLC5A3P53794 718 aa11.5□□□□□ -0.57
SHMT2-218ENST00000555213 CACNA2D1P54289 1103 aa11.5□□□□□ -0.57
SHMT2-218ENST00000555213 EPHA5P54756 1037 aa11.5□□□□□ -0.57
SHMT2-218ENST00000555213 IFRD2Q12894 506 aaPredicted RBP11.5□□□□□ -0.57
SHMT2-218ENST00000555213 SLC18A3Q16572 532 aa11.5□□□□□ -0.57
SHMT2-218ENST00000555213 TJAP1Q5JTD0 557 aa11.5□□□□□ -0.57
SHMT2-218ENST00000555213 DNAAF5Q86Y56 855 aa11.5□□□□□ -0.57
SHMT2-218ENST00000555213 NUP93Q8N1F7 819 aa11.5□□□□□ -0.57
SHMT2-218ENST00000555213 PDZD8Q8NEN9 1154 aa11.5□□□□□ -0.57
SHMT2-218ENST00000555213 TFAP2BQ92481 460 aa11.5□□□□□ -0.57
SHMT2-218ENST00000555213 MYRFLQ96LU7 910 aa11.5□□□□□ -0.57
SHMT2-218ENST00000555213 NOX5Q96PH1 765 aa11.5□□□□□ -0.57
SHMT2-218ENST00000555213 KCNK16Q96T55 309 aa11.5□□□□□ -0.57
SHMT2-218ENST00000555213 SMOQ99835 787 aa11.5□□□□□ -0.57
SHMT2-218ENST00000555213 IRX2Q9BZI1 471 aaPredicted RBP11.5□□□□□ -0.57
SHMT2-218ENST00000555213 SLITRK6Q9H5Y7 841 aa11.5□□□□□ -0.57
SHMT2-218ENST00000555213 COMMD8Q9NX08 183 aa11.5□□□□□ -0.57
SHMT2-218ENST00000555213 TRIM10Q9UDY6 481 aa11.5□□□□□ -0.57
SHMT2-218ENST00000555213 ZMYM5Q9UJ78 669 aa11.5□□□□□ -0.57
SHMT2-218ENST00000555213 CDH22Q9UJ99 828 aa11.5□□□□□ -0.57
SHMT2-218ENST00000555213 SALL4Q9UJQ4 1053 aa11.5□□□□□ -0.57
SHMT2-218ENST00000555213 NAGPAQ9UK23 515 aa11.5□□□□□ -0.57
SHMT2-218ENST00000555213 USTQ9Y2C2 406 aa11.5□□□□□ -0.57
SHMT2-218ENST00000555213 ZFP37Q9Y6Q3 630 aaPredicted RBP11.5□□□□□ -0.57
SHMT2-218ENST00000555213 DUSP10Q9Y6W6 482 aa11.5□□□□□ -0.57
SHMT2-218ENST00000555213 MTCL1Q9Y4B5 1905 aaKnown RBP11.5□□□□□ -0.57
SHMT2-218ENST00000555213 XPO1O14980 1071 aaKnown RBP11.49□□□□□ -0.57
SHMT2-218ENST00000555213 ZSCAN12O43309 604 aa11.49□□□□□ -0.57
SHMT2-218ENST00000555213 AKR1B10O60218 316 aa11.49□□□□□ -0.57
SHMT2-218ENST00000555213 IL9P15248 144 aa11.49□□□□□ -0.57
SHMT2-218ENST00000555213 YWHAQP27348 245 aa11.49□□□□□ -0.57
SHMT2-218ENST00000555213 GABRR2P28476 465 aa11.49□□□□□ -0.57
SHMT2-218ENST00000555213 MAGEA1P43355 309 aa11.49□□□□□ -0.57
SHMT2-218ENST00000555213 PPP3CCP48454 512 aa11.49□□□□□ -0.57
SHMT2-218ENST00000555213 SNX16P57768 344 aa11.49□□□□□ -0.57
SHMT2-218ENST00000555213 NTHL1P78549 312 aa11.49□□□□□ -0.57
SHMT2-218ENST00000555213 FMO1Q01740 532 aa11.49□□□□□ -0.57
SHMT2-218ENST00000555213 TTC30AQ86WT1 665 aa11.49□□□□□ -0.57
SHMT2-218ENST00000555213 ZNF677Q86XU0 584 aa11.49□□□□□ -0.57
SHMT2-218ENST00000555213 TMC8Q8IU68 726 aa11.49□□□□□ -0.57
SHMT2-218ENST00000555213 ADHFE1Q8IWW8 467 aa11.49□□□□□ -0.57
SHMT2-218ENST00000555213 HS6ST3Q8IZP7 471 aa11.49□□□□□ -0.57
SHMT2-218ENST00000555213 SIX6OS1Q8N1H7 587 aa11.49□□□□□ -0.57
SHMT2-218ENST00000555213 EPS8L1Q8TE68 723 aa11.49□□□□□ -0.57
SHMT2-218ENST00000555213 ZNF606Q8WXB4 792 aa11.49□□□□□ -0.57
SHMT2-218ENST00000555213 MRPS31Q92665 395 aaKnown RBP11.49□□□□□ -0.57
SHMT2-218ENST00000555213 SECISBP2LQ93073 1101 aaKnown RBP11.49□□□□□ -0.57
SHMT2-218ENST00000555213 FBXO32Q969P5 355 aa11.49□□□□□ -0.57
SHMT2-218ENST00000555213 TTLL2Q9BWV7 592 aa11.49□□□□□ -0.57
SHMT2-218ENST00000555213 UBXN6Q9BZV1 441 aa11.49□□□□□ -0.57
SHMT2-218ENST00000555213 ATXN3LQ9H3M9 355 aa11.49□□□□□ -0.57
SHMT2-218ENST00000555213 LRRC4Q9HBW1 653 aa11.49□□□□□ -0.57
SHMT2-218ENST00000555213 TMEM30AQ9NV96 361 aa11.49□□□□□ -0.57
SHMT2-218ENST00000555213 TAS2R14Q9NYV8 317 aa11.49□□□□□ -0.57
SHMT2-218ENST00000555213 GDE1Q9NZC3 331 aa11.49□□□□□ -0.57
SHMT2-218ENST00000555213 TRPM5Q9NZQ8 1165 aa11.49□□□□□ -0.57
SHMT2-218ENST00000555213 CDH7Q9ULB5 785 aa11.49□□□□□ -0.57
SHMT2-218ENST00000555213 A0A1W2PRU2 124 aa11.48□□□□□ -0.57
SHMT2-218ENST00000555213 BEST1O76090 585 aa11.48□□□□□ -0.57
SHMT2-218ENST00000555213 LSM8O95777 96 aaKnown RBP11.48□□□□□ -0.57
SHMT2-218ENST00000555213 MMEP08473 750 aa11.48□□□□□ -0.57
SHMT2-218ENST00000555213 HMGA1P17096 107 aaKnown RBP11.48□□□□□ -0.57
SHMT2-218ENST00000555213 DDX6P26196 483 aaKnown RBP eCLIP11.48□□□□□ -0.57
SHMT2-218ENST00000555213 PLA2G4AP47712 749 aa11.48□□□□□ -0.57
SHMT2-218ENST00000555213 VAV2P52735 878 aa11.48□□□□□ -0.57
SHMT2-218ENST00000555213 KRT83P78385 493 aa11.48□□□□□ -0.57
SHMT2-218ENST00000555213 PDE4CQ08493 712 aa11.48□□□□□ -0.57
SHMT2-218ENST00000555213 MTMR3Q13615 1198 aa11.48□□□□□ -0.57
SHMT2-218ENST00000555213 SLC5A9Q2M3M2 681 aa11.48□□□□□ -0.57
SHMT2-218ENST00000555213 TDRD12Q587J7 1177 aaKnown RBP11.48□□□□□ -0.57
SHMT2-218ENST00000555213 PRSS36Q5K4E3 855 aa11.48□□□□□ -0.57
SHMT2-218ENST00000555213 PIGZQ86VD9 579 aa11.48□□□□□ -0.57
SHMT2-218ENST00000555213 ARHGAP18Q8N392 663 aa11.48□□□□□ -0.57
SHMT2-218ENST00000555213 PLCD3Q8N3E9 789 aa11.48□□□□□ -0.57
SHMT2-218ENST00000555213 MSANTD4Q8NCY6 345 aa11.48□□□□□ -0.57
SHMT2-218ENST00000555213 STKLD1Q8NE28 680 aa11.48□□□□□ -0.57
SHMT2-218ENST00000555213 ZMIZ2Q8NF64 920 aa11.48□□□□□ -0.57
SHMT2-218ENST00000555213 SHKBP1Q8TBC3 707 aa11.48□□□□□ -0.57
SHMT2-218ENST00000555213 UBA3Q8TBC4 463 aa11.48□□□□□ -0.57
SHMT2-218ENST00000555213 IPO4Q8TEX9 1081 aaKnown RBP11.48□□□□□ -0.57
SHMT2-218ENST00000555213 ING5Q8WYH8 240 aa11.48□□□□□ -0.57
SHMT2-218ENST00000555213 OVCA2Q8WZ82 227 aa11.48□□□□□ -0.57
SHMT2-218ENST00000555213 RPGRIP1Q96KN7 1286 aa11.48□□□□□ -0.57
SHMT2-218ENST00000555213 PACSIN1Q9BY11 444 aa11.48□□□□□ -0.57
SHMT2-218ENST00000555213 ZNF334Q9HCZ1 680 aaPredicted RBP11.48□□□□□ -0.57
SHMT2-218ENST00000555213 PCDHGC3Q9UN70 934 aa11.48□□□□□ -0.57
SHMT2-218ENST00000555213 NCANO14594 1321 aa11.48□□□□□ -0.57
SHMT2-218ENST00000555213 PTPRDP23468 1912 aa11.48□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms