RNA–Protein interactions for RNA: ENST00000554976.5

TDP1-210, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 2

Gene TDP1, Length 3,040 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-210ENST00000554976 NPR3P17342 541 aa9.33□□□□□ -0.92
TDP1-210ENST00000554976 ACADSBP45954 432 aa9.33□□□□□ -0.92
TDP1-210ENST00000554976 DPYSL3Q14195 570 aa9.33□□□□□ -0.92
TDP1-210ENST00000554976 MDH1BQ5I0G3 518 aa9.33□□□□□ -0.92
TDP1-210ENST00000554976 OR6B2Q6IFH4 312 aa9.33□□□□□ -0.92
TDP1-210ENST00000554976 BBS12Q6ZW61 710 aa9.33□□□□□ -0.92
TDP1-210ENST00000554976 SLC24A5Q71RS6 500 aa9.33□□□□□ -0.92
TDP1-210ENST00000554976 GPRIN1Q7Z2K8 1008 aa9.33□□□□□ -0.92
TDP1-210ENST00000554976 SCML4Q8N228 414 aa9.33□□□□□ -0.92
TDP1-210ENST00000554976 PCED1BQ96HM7 432 aa9.33□□□□□ -0.92
TDP1-210ENST00000554976 MYCBPQ99417 103 aaPredicted RBP9.33□□□□□ -0.92
TDP1-210ENST00000554976 DDX23Q9BUQ8 820 aaKnown RBP9.33□□□□□ -0.92
TDP1-210ENST00000554976 HEMGNQ9BXL5 484 aa9.33□□□□□ -0.92
TDP1-210ENST00000554976 MTMR10Q9NXD2 777 aa9.33□□□□□ -0.92
TDP1-210ENST00000554976 DRG1Q9Y295 367 aaKnown RBP9.33□□□□□ -0.92
TDP1-210ENST00000554976 TTC3P53804 2025 aa9.33□□□□□ -0.92
TDP1-210ENST00000554976 MYBPHLA2RUH7 354 aa9.33□□□□□ -0.92
TDP1-210ENST00000554976 PITPNM1O00562 1244 aa9.33□□□□□ -0.92
TDP1-210ENST00000554976 MDM4O15151 490 aa9.33□□□□□ -0.92
TDP1-210ENST00000554976 POMCP01189 267 aa9.33□□□□□ -0.92
TDP1-210ENST00000554976 CXCL10P02778 98 aa9.33□□□□□ -0.92
TDP1-210ENST00000554976 GGCXP38435 758 aa9.33□□□□□ -0.92
TDP1-210ENST00000554976 KRT17Q04695 432 aa9.33□□□□□ -0.92
TDP1-210ENST00000554976 ARTNQ5T4W7 220 aa9.33□□□□□ -0.92
TDP1-210ENST00000554976 UBAP2Q5T6F2 1119 aaKnown RBP9.33□□□□□ -0.92
TDP1-210ENST00000554976 ALS2CLQ60I27 953 aa9.33□□□□□ -0.92
TDP1-210ENST00000554976 FAM35AQ86V20 835 aa9.33□□□□□ -0.92
TDP1-210ENST00000554976 PIGZQ86VD9 579 aa9.33□□□□□ -0.92
TDP1-210ENST00000554976 ALLCQ8N6M5 410 aa9.33□□□□□ -0.92
TDP1-210ENST00000554976 OR10T2Q8NGX3 314 aa9.33□□□□□ -0.92
TDP1-210ENST00000554976 MYCBPAPQ8TBZ2 947 aa9.33□□□□□ -0.92
TDP1-210ENST00000554976 ZIM3Q96PE6 472 aa9.33□□□□□ -0.92
TDP1-210ENST00000554976 SYT15Q9BQS2 421 aa9.33□□□□□ -0.92
TDP1-210ENST00000554976 DPH5Q9H2P9 285 aa9.33□□□□□ -0.92
TDP1-210ENST00000554976 LRRC4CQ9HCJ2 640 aa9.33□□□□□ -0.92
TDP1-210ENST00000554976 HOMER3Q9NSC5 361 aa9.33□□□□□ -0.92
TDP1-210ENST00000554976 TMLHEQ9NVH6 421 aa9.33□□□□□ -0.92
TDP1-210ENST00000554976 WHRNQ9P202 907 aa9.33□□□□□ -0.92
TDP1-210ENST00000554976 TET1Q8NFU7 2136 aa9.33□□□□□ -0.92
TDP1-210ENST00000554976 DAB1O75553 588 aa9.32□□□□□ -0.92
TDP1-210ENST00000554976 ECEL1O95672 775 aa9.32□□□□□ -0.92
TDP1-210ENST00000554976 COL6A1P12109 1028 aa9.32□□□□□ -0.92
TDP1-210ENST00000554976 HSD17B3P37058 310 aa9.32□□□□□ -0.92
TDP1-210ENST00000554976 EIF4EBP2Q13542 120 aaPredicted RBP9.32□□□□□ -0.92
TDP1-210ENST00000554976 MTFR1Q15390 333 aa9.32□□□□□ -0.92
TDP1-210ENST00000554976 SMTNL2Q2TAL5 461 aa9.32□□□□□ -0.92
TDP1-210ENST00000554976 KCNT1Q5JUK3 1230 aa9.32□□□□□ -0.92
TDP1-210ENST00000554976 ANKRD33Q7Z3H0 272 aa9.32□□□□□ -0.92
TDP1-210ENST00000554976 ZNF280BQ86YH2 543 aa9.32□□□□□ -0.92
TDP1-210ENST00000554976 GLIS1Q8NBF1 620 aa9.32□□□□□ -0.92
TDP1-210ENST00000554976 NCAPGQ9BPX3 1015 aa9.32□□□□□ -0.92
TDP1-210ENST00000554976 ACBD6Q9BR61 282 aa9.32□□□□□ -0.92
TDP1-210ENST00000554976 ADAM7Q9H2U9 754 aa9.32□□□□□ -0.92
TDP1-210ENST00000554976 HESX1Q9UBX0 185 aa9.32□□□□□ -0.92
TDP1-210ENST00000554976 DNPEPQ9ULA0 475 aa9.32□□□□□ -0.92
TDP1-210ENST00000554976 TRIM17Q9Y577 477 aa9.32□□□□□ -0.92
TDP1-210ENST00000554976 ITGAVP06756 1048 aa9.32□□□□□ -0.92
TDP1-210ENST00000554976 PDGFRAP16234 1089 aa9.32□□□□□ -0.92
TDP1-210ENST00000554976 TYMPP19971 482 aa9.32□□□□□ -0.92
TDP1-210ENST00000554976 BRCC3P46736 316 aa9.32□□□□□ -0.92
TDP1-210ENST00000554976 MRPS5P82675 430 aaKnown RBP9.32□□□□□ -0.92
TDP1-210ENST00000554976 LLGL1Q15334 1064 aa9.32□□□□□ -0.92
TDP1-210ENST00000554976 TTMPQ5BVD1 217 aa9.32□□□□□ -0.92
TDP1-210ENST00000554976 INTS6LQ5JSJ4 861 aaKnown RBP9.32□□□□□ -0.92
TDP1-210ENST00000554976 C1orf53Q5VUE5 145 aa9.32□□□□□ -0.92
TDP1-210ENST00000554976 SLC9A4Q6AI14 798 aa9.32□□□□□ -0.92
TDP1-210ENST00000554976 DCLRE1AQ6PJP8 1040 aa9.32□□□□□ -0.92
TDP1-210ENST00000554976 LRRTM3Q86VH5 581 aa9.32□□□□□ -0.92
TDP1-210ENST00000554976 PQLC3Q8N755 202 aa9.32□□□□□ -0.92
TDP1-210ENST00000554976 ATL2Q8NHH9 583 aa9.32□□□□□ -0.92
TDP1-210ENST00000554976 CASD1Q96PB1 797 aa9.32□□□□□ -0.92
TDP1-210ENST00000554976 TMEM209Q96SK2 561 aa9.32□□□□□ -0.92
TDP1-210ENST00000554976 FTHL17Q9BXU8 183 aa9.32□□□□□ -0.92
TDP1-210ENST00000554976 FRMD8P1Q9BZ68 369 aaPredicted RBP9.32□□□□□ -0.92
TDP1-210ENST00000554976 SYNCQ9H7C4 482 aa9.32□□□□□ -0.92
TDP1-210ENST00000554976 ZWILCHQ9H900 591 aa9.32□□□□□ -0.92
TDP1-210ENST00000554976 MED4Q9NPJ6 270 aa9.32□□□□□ -0.92
TDP1-210ENST00000554976 SNX24Q9Y343 169 aa9.32□□□□□ -0.92
TDP1-210ENST00000554976 KBTBD13C9JR72 458 aa9.31□□□□□ -0.92
TDP1-210ENST00000554976 GRAP2O75791 330 aa9.31□□□□□ -0.92
TDP1-210ENST00000554976 TJP3O95049 919 aa9.31□□□□□ -0.92
TDP1-210ENST00000554976 ODC1P11926 461 aa9.31□□□□□ -0.92
TDP1-210ENST00000554976 GBP1P32455 592 aa9.31□□□□□ -0.92
TDP1-210ENST00000554976 TNNT3P45378 269 aaPredicted RBP9.31□□□□□ -0.92
TDP1-210ENST00000554976 CBLBQ13191 982 aa9.31□□□□□ -0.92
TDP1-210ENST00000554976 ARHGEF6Q15052 776 aa9.31□□□□□ -0.92
TDP1-210ENST00000554976 CA9Q16790 459 aa9.31□□□□□ -0.92
TDP1-210ENST00000554976 LRIG3Q6UXM1 1119 aa9.31□□□□□ -0.92
TDP1-210ENST00000554976 CCDC50Q8IVM0 306 aa9.31□□□□□ -0.92
TDP1-210ENST00000554976 RNF169Q8NCN4 708 aa9.31□□□□□ -0.92
TDP1-210ENST00000554976 FBXO25Q8TCJ0 367 aa9.31□□□□□ -0.92
TDP1-210ENST00000554976 ZBTB9Q96C00 473 aa9.31□□□□□ -0.92
TDP1-210ENST00000554976 NPY6RQ99463 290 aa9.31□□□□□ -0.92
TDP1-210ENST00000554976 FAM118BQ9BPY3 351 aa9.31□□□□□ -0.92
TDP1-210ENST00000554976 RASAL2Q9UJF2 1139 aa9.31□□□□□ -0.92
TDP1-210ENST00000554976 PCDHB8Q9UN66 801 aa9.31□□□□□ -0.92
TDP1-210ENST00000554976 TIMM13Q9Y5L4 95 aaPredicted RBP9.31□□□□□ -0.92
TDP1-210ENST00000554976 OBSL1O75147 1896 aa9.31□□□□□ -0.92
TDP1-210ENST00000554976 I3L4J1 428 aa9.31□□□□□ -0.92
TDP1-210ENST00000554976 ENPP3O14638 875 aa9.31□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms