RNA–Protein interactions for RNA: ENST00000554819.5

SCFD1-214, Transcript of sec1 family domain containing 1, humanhuman

TSL 5

Gene SCFD1, Length 608 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-214ENST00000554819 A1BGP04217 495 aa4.81□□□□□ -1.64
SCFD1-214ENST00000554819 MYCLP12524 364 aaPredicted RBP4.81□□□□□ -1.64
SCFD1-214ENST00000554819 CD19P15391 556 aa4.81□□□□□ -1.64
SCFD1-214ENST00000554819 PRIM2P49643 509 aa4.81□□□□□ -1.64
SCFD1-214ENST00000554819 PGDP52209 483 aa4.81□□□□□ -1.64
SCFD1-214ENST00000554819 TIRAPP58753 221 aa4.81□□□□□ -1.64
SCFD1-214ENST00000554819 STK3Q13188 491 aa4.81□□□□□ -1.64
SCFD1-214ENST00000554819 DENND2CQ68D51 928 aa4.81□□□□□ -1.64
SCFD1-214ENST00000554819 DPY19L2P1Q6NXN4 242 aa4.81□□□□□ -1.64
SCFD1-214ENST00000554819 SYCE2Q6PIF2 218 aa4.81□□□□□ -1.64
SCFD1-214ENST00000554819 BEND5Q7L4P6 421 aa4.81□□□□□ -1.64
SCFD1-214ENST00000554819 AMIGO2Q86SJ2 522 aa4.81□□□□□ -1.64
SCFD1-214ENST00000554819 CCDC33Q8N5R6 958 aa4.81□□□□□ -1.64
SCFD1-214ENST00000554819 NAA15Q9BXJ9 866 aaKnown RBP4.81□□□□□ -1.64
SCFD1-214ENST00000554819 HEYLQ9NQ87 328 aaPredicted RBP4.81□□□□□ -1.64
SCFD1-214ENST00000554819 STARD7Q9NQZ5 370 aa4.81□□□□□ -1.64
SCFD1-214ENST00000554819 FER1L4A9Z1Z3 1794 aa4.81□□□□□ -1.64
SCFD1-214ENST00000554819 CLCA1A8K7I4 914 aa4.8□□□□□ -1.64
SCFD1-214ENST00000554819 TARM1B6A8C7 271 aa4.8□□□□□ -1.64
SCFD1-214ENST00000554819 SNX2O60749 519 aa4.8□□□□□ -1.64
SCFD1-214ENST00000554819 PMPCBO75439 489 aa4.8□□□□□ -1.64
SCFD1-214ENST00000554819 HGFP14210 728 aa4.8□□□□□ -1.64
SCFD1-214ENST00000554819 CTGFP29279 349 aa4.8□□□□□ -1.64
SCFD1-214ENST00000554819 GKP32189 559 aa4.8□□□□□ -1.64
SCFD1-214ENST00000554819 STT3AP46977 705 aa4.8□□□□□ -1.64
SCFD1-214ENST00000554819 TIAL1Q01085 375 aaKnown RBP eCLIP4.8□□□□□ -1.644e-6■■■■□ 24.4
SCFD1-214ENST00000554819 L1TD1Q5T7N2 865 aaKnown RBP4.8□□□□□ -1.64
SCFD1-214ENST00000554819 FCRLBQ6BAA4 426 aa4.8□□□□□ -1.64
SCFD1-214ENST00000554819 CATSPERGQ6ZRH7 1159 aa4.8□□□□□ -1.64
SCFD1-214ENST00000554819 PTF1AQ7RTS3 328 aa4.8□□□□□ -1.64
SCFD1-214ENST00000554819 KRT28Q7Z3Y7 464 aa4.8□□□□□ -1.64
SCFD1-214ENST00000554819 VGLL2Q8N8G2 317 aa4.8□□□□□ -1.64
SCFD1-214ENST00000554819 CCDC150Q8NCX0 1101 aa4.8□□□□□ -1.64
SCFD1-214ENST00000554819 NGDNQ8NEJ9 315 aaKnown RBP4.8□□□□□ -1.64
SCFD1-214ENST00000554819 ZNF764Q96H86 408 aaPredicted RBP4.8□□□□□ -1.64
SCFD1-214ENST00000554819 ZBTB45Q96K62 511 aaPredicted RBP4.8□□□□□ -1.64
SCFD1-214ENST00000554819 EIF2AQ9BY44 585 aaKnown RBP4.8□□□□□ -1.64
SCFD1-214ENST00000554819 TFCP2L1Q9NZI6 479 aa4.8□□□□□ -1.64
SCFD1-214ENST00000554819 DNAJB11Q9UBS4 358 aa4.8□□□□□ -1.64
SCFD1-214ENST00000554819 NKX1-2Q9UD57 310 aaPredicted RBP4.8□□□□□ -1.64
SCFD1-214ENST00000554819 ADAM21Q9UKJ8 722 aa4.8□□□□□ -1.64
SCFD1-214ENST00000554819 AMFRQ9UKV5 643 aa4.8□□□□□ -1.64
SCFD1-214ENST00000554819 AP4M1O00189 453 aa4.79□□□□□ -1.64
SCFD1-214ENST00000554819 CES2O00748 559 aa4.79□□□□□ -1.64
SCFD1-214ENST00000554819 APOL1O14791 398 aa4.79□□□□□ -1.64
SCFD1-214ENST00000554819 PLIN1O60240 522 aa4.79□□□□□ -1.64
SCFD1-214ENST00000554819 VNN1O95497 513 aa4.79□□□□□ -1.64
SCFD1-214ENST00000554819 MYL4P12829 197 aa4.79□□□□□ -1.64
SCFD1-214ENST00000554819 TSHRP16473 764 aa4.79□□□□□ -1.64
SCFD1-214ENST00000554819 FGFR2P21802 821 aa4.79□□□□□ -1.64
SCFD1-214ENST00000554819 AK2P54819 239 aa4.79□□□□□ -1.64
SCFD1-214ENST00000554819 HOXA4Q00056 320 aaPredicted RBP4.79□□□□□ -1.64
SCFD1-214ENST00000554819 E2F1Q01094 437 aa4.79□□□□□ -1.64
SCFD1-214ENST00000554819 TMEM63BQ5T3F8 832 aa4.79□□□□□ -1.64
SCFD1-214ENST00000554819 LIX1LQ8IVB5 337 aa4.79□□□□□ -1.64
SCFD1-214ENST00000554819 RNF152Q8N8N0 203 aa4.79□□□□□ -1.64
SCFD1-214ENST00000554819 BRI3BPQ8WY22 251 aa4.79□□□□□ -1.64
SCFD1-214ENST00000554819 ZDHHC12Q96GR4 267 aa4.79□□□□□ -1.64
SCFD1-214ENST00000554819 TNIP3Q96KP6 325 aa4.79□□□□□ -1.64
SCFD1-214ENST00000554819 FAM227BQ96M60 508 aa4.79□□□□□ -1.64
SCFD1-214ENST00000554819 HIST1H2AAQ96QV6 131 aa4.79□□□□□ -1.64
SCFD1-214ENST00000554819 PRR25Q96S07 402 aa4.79□□□□□ -1.64
SCFD1-214ENST00000554819 MAGEB5Q9BZ81 275 aa4.79□□□□□ -1.64
SCFD1-214ENST00000554819 SH3BP4Q9P0V3 963 aa4.79□□□□□ -1.64
SCFD1-214ENST00000554819 MYO1AQ9UBC5 1043 aa4.79□□□□□ -1.64
SCFD1-214ENST00000554819 HPSEQ9Y251 543 aa4.79□□□□□ -1.64
SCFD1-214ENST00000554819 OVOL3O00110 214 aa4.78□□□□□ -1.64
SCFD1-214ENST00000554819 EXOC5O00471 708 aa4.78□□□□□ -1.64
SCFD1-214ENST00000554819 ZNF213O14771 459 aa4.78□□□□□ -1.64
SCFD1-214ENST00000554819 MYL3P08590 195 aa4.78□□□□□ -1.64
SCFD1-214ENST00000554819 IDEP14735 1019 aa4.78□□□□□ -1.64
SCFD1-214ENST00000554819 FBLP22087 321 aaKnown RBP4.78□□□□□ -1.64
SCFD1-214ENST00000554819 KCNAB1Q14722 419 aa4.78□□□□□ -1.64
SCFD1-214ENST00000554819 CYP1B1Q16678 543 aa4.78□□□□□ -1.64
SCFD1-214ENST00000554819 ARL13BQ3SXY8 428 aa4.78□□□□□ -1.64
SCFD1-214ENST00000554819 MANEALQ5VSG8 457 aa4.78□□□□□ -1.64
SCFD1-214ENST00000554819 KLHDC7AQ5VTJ3 777 aa4.78□□□□□ -1.64
SCFD1-214ENST00000554819 RRAGBQ5VZM2 374 aa4.78□□□□□ -1.64
SCFD1-214ENST00000554819 USP17L6PQ6QN14 398 aa4.78□□□□□ -1.64
SCFD1-214ENST00000554819 NAPRTQ6XQN6 538 aa4.78□□□□□ -1.64
SCFD1-214ENST00000554819 TRIM72Q6ZMU5 477 aa4.78□□□□□ -1.64
SCFD1-214ENST00000554819 ZNF788Q6ZQV5 615 aa4.78□□□□□ -1.64
SCFD1-214ENST00000554819 PTCHD4Q6ZW05 846 aa4.78□□□□□ -1.64
SCFD1-214ENST00000554819 SFTPA1Q8IWL2 248 aa4.78□□□□□ -1.64
SCFD1-214ENST00000554819 HASPINQ8TF76 798 aa4.78□□□□□ -1.64
SCFD1-214ENST00000554819 DAZAP1Q96EP5 407 aaKnown RBP4.78□□□□□ -1.64
SCFD1-214ENST00000554819 LRRC46Q96FV0 321 aa4.78□□□□□ -1.64
SCFD1-214ENST00000554819 LENG8Q96PV6 779 aaPredicted RBP4.78□□□□□ -1.64
SCFD1-214ENST00000554819 THAP7Q9BT49 309 aaPredicted RBP4.78□□□□□ -1.64
SCFD1-214ENST00000554819 ZBTB26Q9HCK0 441 aa4.78□□□□□ -1.64
SCFD1-214ENST00000554819 SNX15Q9NRS6 342 aa4.78□□□□□ -1.64
SCFD1-214ENST00000554819 STEAP1Q9UHE8 339 aa4.78□□□□□ -1.64
SCFD1-214ENST00000554819 POLR2AP24928 1970 aaKnown RBP4.78□□□□□ -1.64
SCFD1-214ENST00000554819 AOX1Q06278 1338 aa4.77□□□□□ -1.65
SCFD1-214ENST00000554819 A0A1W2PPC4 97 aa4.77□□□□□ -1.65
SCFD1-214ENST00000554819 H7C1Q1 480 aa4.77□□□□□ -1.65
SCFD1-214ENST00000554819 COQ9O75208 318 aa4.77□□□□□ -1.65
SCFD1-214ENST00000554819 FGAP02671 866 aa4.77□□□□□ -1.65
SCFD1-214ENST00000554819 PRKCGP05129 697 aa4.77□□□□□ -1.65
SCFD1-214ENST00000554819 CREB1P16220 341 aa4.77□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms