RNA–Protein interactions for RNA: ENST00000554803.5

SRP54-205, Transcript of signal recognition particle 54, humanhuman

TSL 4

Gene SRP54, Length 572 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-205ENST00000554803 KLC4Q9NSK0 619 aa11.72□□□□□ -0.53
SRP54-205ENST00000554803 EPS15L1Q9UBC2 864 aa11.72□□□□□ -0.53
SRP54-205ENST00000554803 ANGPTL2Q9UKU9 493 aa11.72□□□□□ -0.53
SRP54-205ENST00000554803 ALG6Q9Y672 507 aa11.72□□□□□ -0.53
SRP54-205ENST00000554803 DSPP15924 2871 aaKnown RBP11.71□□□□□ -0.53
SRP54-205ENST00000554803 COL1A2P08123 1366 aa11.71□□□□□ -0.53
SRP54-205ENST00000554803 GREB1Q4ZG55 1949 aa11.71□□□□□ -0.53
SRP54-205ENST00000554803 O00370 1275 aa11.71□□□□□ -0.53
SRP54-205ENST00000554803 LAMTOR5O43504 91 aa11.71□□□□□ -0.53
SRP54-205ENST00000554803 TBC1D4O60343 1298 aa11.71□□□□□ -0.53
SRP54-205ENST00000554803 LILRB5O75023 590 aa11.71□□□□□ -0.53
SRP54-205ENST00000554803 LRRN2O75325 713 aa11.71□□□□□ -0.53
SRP54-205ENST00000554803 CTSAP10619 480 aa11.71□□□□□ -0.53
SRP54-205ENST00000554803 DRD4P21917 467 aa11.71□□□□□ -0.53
SRP54-205ENST00000554803 PTGIRP43119 386 aa11.71□□□□□ -0.53
SRP54-205ENST00000554803 VAMP7P51809 220 aa11.71□□□□□ -0.53
SRP54-205ENST00000554803 POLGP54098 1239 aaPredicted RBP11.71□□□□□ -0.53
SRP54-205ENST00000554803 RWDD2BP57060 319 aa11.71□□□□□ -0.53
SRP54-205ENST00000554803 NR1H3Q13133 447 aa11.71□□□□□ -0.53
SRP54-205ENST00000554803 SNCBQ16143 134 aa11.71□□□□□ -0.53
SRP54-205ENST00000554803 ZNF484Q5JVG2 852 aa11.71□□□□□ -0.53
SRP54-205ENST00000554803 DCLRE1AQ6PJP8 1040 aa11.71□□□□□ -0.53
SRP54-205ENST00000554803 MTHFD1LQ6UB35 978 aa11.71□□□□□ -0.53
SRP54-205ENST00000554803 CRELD2Q6UXH1 353 aaPredicted RBP11.71□□□□□ -0.53
SRP54-205ENST00000554803 PIGWQ7Z7B1 504 aa11.71□□□□□ -0.53
SRP54-205ENST00000554803 FAM228AQ86W67 206 aa11.71□□□□□ -0.53
SRP54-205ENST00000554803 FAM71AQ8IYT1 594 aa11.71□□□□□ -0.53
SRP54-205ENST00000554803 VPS52Q8N1B4 723 aa11.71□□□□□ -0.53
SRP54-205ENST00000554803 RIBC1Q8N443 379 aaPredicted RBP11.71□□□□□ -0.53
SRP54-205ENST00000554803 NETO1Q8TDF5 533 aa11.71□□□□□ -0.53
SRP54-205ENST00000554803 TMC2Q8TDI7 906 aa11.71□□□□□ -0.53
SRP54-205ENST00000554803 AUTS2Q8WXX7 1259 aa11.71□□□□□ -0.53
SRP54-205ENST00000554803 BSNDQ8WZ55 320 aa11.71□□□□□ -0.53
SRP54-205ENST00000554803 ART4Q93070 314 aa11.71□□□□□ -0.53
SRP54-205ENST00000554803 TMEM143Q96AN5 459 aa11.71□□□□□ -0.53
SRP54-205ENST00000554803 GRAMD1AQ96CP6 724 aa11.71□□□□□ -0.53
SRP54-205ENST00000554803 TMEM169Q96HH4 297 aa11.71□□□□□ -0.53
SRP54-205ENST00000554803 FOXQ1Q9C009 403 aa11.71□□□□□ -0.53
SRP54-205ENST00000554803 AVENQ9NQS1 362 aaPredicted RBP11.71□□□□□ -0.53
SRP54-205ENST00000554803 CTTNBP2NLQ9P2B4 639 aa11.71□□□□□ -0.53
SRP54-205ENST00000554803 GINS2Q9Y248 185 aa11.71□□□□□ -0.53
SRP54-205ENST00000554803 COQ4Q9Y3A0 265 aa11.71□□□□□ -0.53
SRP54-205ENST00000554803 SBDSQ9Y3A5 250 aaKnown RBP eCLIP11.71□□□□□ -0.53
SRP54-205ENST00000554803 PCDHA3Q9Y5H8 950 aa11.71□□□□□ -0.53
SRP54-205ENST00000554803 ACTL7BQ9Y614 415 aa11.71□□□□□ -0.53
SRP54-205ENST00000554803 COL4A3Q01955 1670 aa11.71□□□□□ -0.54
SRP54-205ENST00000554803 SPAG17Q6Q759 2223 aa11.7□□□□□ -0.54
SRP54-205ENST00000554803 CCT8L1PA6NM43 557 aa11.7□□□□□ -0.54
SRP54-205ENST00000554803 NT5C1B-RDH14C9J2C7 533 aa11.7□□□□□ -0.54
SRP54-205ENST00000554803 CLIC2O15247 247 aa11.7□□□□□ -0.54
SRP54-205ENST00000554803 DGAT1O75907 488 aa11.7□□□□□ -0.54
SRP54-205ENST00000554803 C22orf31O95567 290 aa11.7□□□□□ -0.54
SRP54-205ENST00000554803 ECEL1O95672 775 aa11.7□□□□□ -0.54
SRP54-205ENST00000554803 ITGA4P13612 1032 aa11.7□□□□□ -0.54
SRP54-205ENST00000554803 PLS3P13797 630 aa11.7□□□□□ -0.54
SRP54-205ENST00000554803 EZRP15311 586 aaKnown RBP11.7□□□□□ -0.54
SRP54-205ENST00000554803 ITIH2P19823 946 aa11.7□□□□□ -0.54
SRP54-205ENST00000554803 NMT1P30419 496 aaKnown RBP11.7□□□□□ -0.54
SRP54-205ENST00000554803 GBP2P32456 591 aaPredicted RBP11.7□□□□□ -0.54
SRP54-205ENST00000554803 RFC5P40937 340 aa11.7□□□□□ -0.54
SRP54-205ENST00000554803 MXI1P50539 228 aa11.7□□□□□ -0.54
SRP54-205ENST00000554803 STARD6P59095 220 aa11.7□□□□□ -0.54
SRP54-205ENST00000554803 BPIFB4P59827 614 aa11.7□□□□□ -0.54
SRP54-205ENST00000554803 RNASE9P60153 205 aaKnown RBP11.7□□□□□ -0.54
SRP54-205ENST00000554803 MRPS25P82663 173 aaKnown RBP11.7□□□□□ -0.54
SRP54-205ENST00000554803 GTF2BQ00403 316 aa11.7□□□□□ -0.54
SRP54-205ENST00000554803 CENPCQ03188 943 aa11.7□□□□□ -0.54
SRP54-205ENST00000554803 CSTF1Q05048 431 aaKnown RBP11.7□□□□□ -0.54
SRP54-205ENST00000554803 PRPF4BQ13523 1007 aaKnown RBP11.7□□□□□ -0.54
SRP54-205ENST00000554803 RELL1Q8IUW5 271 aa11.7□□□□□ -0.54
SRP54-205ENST00000554803 ABI1Q8IZP0 508 aa11.7□□□□□ -0.54
SRP54-205ENST00000554803 LRRC71Q8N4P6 559 aa11.7□□□□□ -0.54
SRP54-205ENST00000554803 LMO3Q8TAP4 145 aa11.7□□□□□ -0.54
SRP54-205ENST00000554803 ASAP3Q8TDY4 903 aa11.7□□□□□ -0.54
SRP54-205ENST00000554803 CCT6BQ92526 530 aa11.7□□□□□ -0.54
SRP54-205ENST00000554803 NELL1Q92832 810 aa11.7□□□□□ -0.54
SRP54-205ENST00000554803 KCNN1Q92952 543 aa11.7□□□□□ -0.54
SRP54-205ENST00000554803 CD101Q93033 1021 aa11.7□□□□□ -0.54
SRP54-205ENST00000554803 ANKRD27Q96NW4 1050 aa11.7□□□□□ -0.54
SRP54-205ENST00000554803 POLR3FQ9H1D9 316 aaPredicted RBP11.7□□□□□ -0.54
SRP54-205ENST00000554803 NEUROG2Q9H2A3 272 aa11.7□□□□□ -0.54
SRP54-205ENST00000554803 SLC2A4RGQ9NR83 387 aa11.7□□□□□ -0.54
SRP54-205ENST00000554803 INTS9Q9NV88 658 aaKnown RBP11.7□□□□□ -0.54
SRP54-205ENST00000554803 ZSCAN32Q9NX65 697 aa11.7□□□□□ -0.54
SRP54-205ENST00000554803 BCCIPQ9P287 314 aaKnown RBP eCLIP11.7□□□□□ -0.54
SRP54-205ENST00000554803 ATP8A1Q9Y2Q0 1164 aa11.7□□□□□ -0.54
SRP54-205ENST00000554803 IGKV6-21A0A0C4DH24 114 aa11.69□□□□□ -0.54
SRP54-205ENST00000554803 RASGRF2O14827 1237 aa11.69□□□□□ -0.54
SRP54-205ENST00000554803 MAGEB2O15479 319 aa11.69□□□□□ -0.54
SRP54-205ENST00000554803 MAFO75444 373 aaPredicted RBP11.69□□□□□ -0.54
SRP54-205ENST00000554803 GAS8O95995 478 aa11.69□□□□□ -0.54
SRP54-205ENST00000554803 FTLP02792 175 aaPredicted RBP11.69□□□□□ -0.54
SRP54-205ENST00000554803 MMEP08473 750 aa11.69□□□□□ -0.54
SRP54-205ENST00000554803 PMLP29590 882 aa11.69□□□□□ -0.54
SRP54-205ENST00000554803 COILP38432 576 aaPredicted RBP11.69□□□□□ -0.54
SRP54-205ENST00000554803 CETN2P41208 172 aa11.69□□□□□ -0.54
SRP54-205ENST00000554803 ALDH7A1P49419 539 aaKnown RBP11.69□□□□□ -0.54
SRP54-205ENST00000554803 PEX5P50542 639 aa11.69□□□□□ -0.54
SRP54-205ENST00000554803 CLCN3P51790 818 aa11.69□□□□□ -0.54
SRP54-205ENST00000554803 SEC24CP53992 1094 aa11.69□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms