RNA–Protein interactions for RNA: ENST00000554785.1

PRPF39-208, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 2

Gene PRPF39, Length 2,121 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-208ENST00000554785 CHD2O14647 1828 aaKnown RBP1.84□□□□□ -2.11
PRPF39-208ENST00000554785 VCANP13611 3396 aa1.84□□□□□ -2.12
PRPF39-208ENST00000554785 A0A087WWL8 130 aa1.84□□□□□ -2.12
PRPF39-208ENST00000554785 CCDC195A0A1B0GUA6 201 aa1.84□□□□□ -2.12
PRPF39-208ENST00000554785 MYADML2A6NDP7 307 aa1.84□□□□□ -2.12
PRPF39-208ENST00000554785 POM121BA6NF01 834 aa1.84□□□□□ -2.12
PRPF39-208ENST00000554785 VWC2LB2RUY7 222 aa1.84□□□□□ -2.12
PRPF39-208ENST00000554785 F8W8V4 182 aa1.84□□□□□ -2.12
PRPF39-208ENST00000554785 PYCARD-AS1I3L0S3 204 aa1.84□□□□□ -2.12
PRPF39-208ENST00000554785 TPD52L2O43399 206 aaKnown RBP1.84□□□□□ -2.12
PRPF39-208ENST00000554785 VPS4BO75351 444 aa1.84□□□□□ -2.12
PRPF39-208ENST00000554785 ERN1O75460 977 aaKnown RBP1.84□□□□□ -2.12
PRPF39-208ENST00000554785 LDHAP00338 332 aaKnown RBP1.84□□□□□ -2.12
PRPF39-208ENST00000554785 PARP1P09874 1014 aaKnown RBP1.84□□□□□ -2.12
PRPF39-208ENST00000554785 TNFSF4P23510 183 aa1.84□□□□□ -2.12
PRPF39-208ENST00000554785 CENPFP49454 3210 aa1.84□□□□□ -2.12
PRPF39-208ENST00000554785 RPS16P62249 146 aaKnown RBP1.84□□□□□ -2.12
PRPF39-208ENST00000554785 BTKQ06187 659 aa1.84□□□□□ -2.12
PRPF39-208ENST00000554785 TCF15Q12870 199 aa1.84□□□□□ -2.12
PRPF39-208ENST00000554785 CHD4Q14839 1912 aa1.84□□□□□ -2.12
PRPF39-208ENST00000554785 NWD1Q149M9 1564 aa1.84□□□□□ -2.12
PRPF39-208ENST00000554785 SF3B3Q15393 1217 aaKnown RBP1.84□□□□□ -2.12
PRPF39-208ENST00000554785 LONRF3Q496Y0 759 aa1.84□□□□□ -2.12
PRPF39-208ENST00000554785 EPHA10Q5JZY3 1008 aa1.84□□□□□ -2.12
PRPF39-208ENST00000554785 NHSL1Q5SYE7 1610 aa1.84□□□□□ -2.12
PRPF39-208ENST00000554785 AHDC1Q5TGY3 1603 aaPredicted RBP1.84□□□□□ -2.12
PRPF39-208ENST00000554785 TAPT1Q6NXT6 567 aa1.84□□□□□ -2.12
PRPF39-208ENST00000554785 BRINP3Q76B58 766 aa1.84□□□□□ -2.12
PRPF39-208ENST00000554785 PPP1R32Q7Z5V6 425 aa1.84□□□□□ -2.12
PRPF39-208ENST00000554785 ARHGEF25Q86VW2 580 aa1.84□□□□□ -2.12
PRPF39-208ENST00000554785 MICU3Q86XE3 530 aa1.84□□□□□ -2.12
PRPF39-208ENST00000554785 NALCNQ8IZF0 1738 aa1.84□□□□□ -2.12
PRPF39-208ENST00000554785 SPICE1Q8N0Z3 855 aa1.84□□□□□ -2.12
PRPF39-208ENST00000554785 MPP5Q8N3R9 675 aa1.84□□□□□ -2.12
PRPF39-208ENST00000554785 SLC30A5Q8TAD4 765 aa1.84□□□□□ -2.12
PRPF39-208ENST00000554785 DEPTORQ8TB45 409 aa1.84□□□□□ -2.12
PRPF39-208ENST00000554785 LPIN2Q92539 896 aa1.84□□□□□ -2.12
PRPF39-208ENST00000554785 MAML1Q92585 1016 aa1.84□□□□□ -2.12
PRPF39-208ENST00000554785 ZC3H10Q96K80 434 aaKnown RBP1.84□□□□□ -2.12
PRPF39-208ENST00000554785 SGCZQ96LD1 299 aa1.84□□□□□ -2.12
PRPF39-208ENST00000554785 MOGAT1Q96PD6 335 aa1.84□□□□□ -2.12
PRPF39-208ENST00000554785 MED15Q96RN5 788 aa1.84□□□□□ -2.12
PRPF39-208ENST00000554785 TRIB1Q96RU8 372 aa1.84□□□□□ -2.12
PRPF39-208ENST00000554785 SPATA5L1Q9BVQ7 753 aa1.84□□□□□ -2.12
PRPF39-208ENST00000554785 KLK15Q9H2R5 256 aa1.84□□□□□ -2.12
PRPF39-208ENST00000554785 A1CFQ9NQ94 594 aaKnown RBP1.84□□□□□ -2.12
PRPF39-208ENST00000554785 ARHGAP35Q9NRY4 1499 aa1.84□□□□□ -2.12
PRPF39-208ENST00000554785 TBCCD1Q9NVR7 557 aa1.84□□□□□ -2.12
PRPF39-208ENST00000554785 ASB6Q9NWX5 421 aa1.84□□□□□ -2.12
PRPF39-208ENST00000554785 ETAA1Q9NY74 926 aa1.84□□□□□ -2.12
PRPF39-208ENST00000554785 CDK12Q9NYV4 1490 aaPredicted RBP1.84□□□□□ -2.12
PRPF39-208ENST00000554785 FNIP2Q9P278 1114 aa1.84□□□□□ -2.12
PRPF39-208ENST00000554785 CTTNBP2NLQ9P2B4 639 aa1.84□□□□□ -2.12
PRPF39-208ENST00000554785 HESX1Q9UBX0 185 aa1.84□□□□□ -2.12
PRPF39-208ENST00000554785 TAGLN3Q9UI15 199 aa1.84□□□□□ -2.12
PRPF39-208ENST00000554785 PADI4Q9UM07 663 aa1.84□□□□□ -2.12
PRPF39-208ENST00000554785 DMTF1Q9Y222 760 aa1.84□□□□□ -2.12
PRPF39-208ENST00000554785 MARF1Q9Y4F3 1742 aaKnown RBP1.83□□□□□ -2.12
PRPF39-208ENST00000554785 MKI67P46013 3256 aaKnown RBP1.83□□□□□ -2.12
PRPF39-208ENST00000554785 GLI3P10071 1580 aa1.83□□□□□ -2.12
PRPF39-208ENST00000554785 ABCC3O15438 1527 aa1.83□□□□□ -2.12
PRPF39-208ENST00000554785 EFCAB6Q5THR3 1501 aa1.83□□□□□ -2.12
PRPF39-208ENST00000554785 GPATCH8Q9UKJ3 1502 aaKnown RBP1.83□□□□□ -2.12
PRPF39-208ENST00000554785 CAMSAP2Q08AD1 1489 aa1.83□□□□□ -2.12
PRPF39-208ENST00000554785 CCDC18Q5T9S5 1454 aa1.83□□□□□ -2.12
PRPF39-208ENST00000554785 BCL9LQ86UU0 1499 aa1.83□□□□□ -2.12
PRPF39-208ENST00000554785 FMN1Q68DA7 1419 aa1.83□□□□□ -2.12
PRPF39-208ENST00000554785 FGD6Q6ZV73 1430 aa1.83□□□□□ -2.12
PRPF39-208ENST00000554785 CCNB3Q8WWL7 1395 aa1.83□□□□□ -2.12
PRPF39-208ENST00000554785 MBD3L4A6NDZ8 208 aaPredicted RBP1.83□□□□□ -2.12
PRPF39-208ENST00000554785 MBD3L3A6NE82 208 aaPredicted RBP1.83□□□□□ -2.12
PRPF39-208ENST00000554785 TMEM233B4DJY2 109 aa1.83□□□□□ -2.12
PRPF39-208ENST00000554785 NCK2O43639 380 aa1.83□□□□□ -2.12
PRPF39-208ENST00000554785 SUN1O94901 812 aa1.83□□□□□ -2.12
PRPF39-208ENST00000554785 SETSIPP0DME0 302 aa1.83□□□□□ -2.12
PRPF39-208ENST00000554785 CYP2C9P11712 490 aa1.83□□□□□ -2.12
PRPF39-208ENST00000554785 XRCC6P12956 609 aaKnown RBP eCLIP1.83□□□□□ -2.12
PRPF39-208ENST00000554785 KCNA2P16389 499 aa1.83□□□□□ -2.12
PRPF39-208ENST00000554785 TSHRP16473 764 aa1.83□□□□□ -2.12
PRPF39-208ENST00000554785 KLRC1P26715 233 aa1.83□□□□□ -2.12
PRPF39-208ENST00000554785 VIPR2P41587 438 aa1.83□□□□□ -2.12
PRPF39-208ENST00000554785 WNT3P56703 355 aa1.83□□□□□ -2.12
PRPF39-208ENST00000554785 PROK1P58294 105 aa1.83□□□□□ -2.12
PRPF39-208ENST00000554785 BLOC1S1P78537 153 aa1.83□□□□□ -2.12
PRPF39-208ENST00000554785 MAPK7Q13164 816 aa1.83□□□□□ -2.12
PRPF39-208ENST00000554785 FAM209BQ5JX69 171 aa1.83□□□□□ -2.12
PRPF39-208ENST00000554785 KLHDC7AQ5VTJ3 777 aa1.83□□□□□ -2.12
PRPF39-208ENST00000554785 DCAF12L1Q5VU92 463 aa1.83□□□□□ -2.12
PRPF39-208ENST00000554785 IZUMO3Q5VZ72 239 aa1.83□□□□□ -2.12
PRPF39-208ENST00000554785 KIAA0895LQ68EN5 471 aa1.83□□□□□ -2.12
PRPF39-208ENST00000554785 ARMC6Q6NXE6 501 aa1.83□□□□□ -2.12
PRPF39-208ENST00000554785 XRRA1Q6P2D8 792 aa1.83□□□□□ -2.12
PRPF39-208ENST00000554785 C1orf228Q6PIY5 440 aa1.83□□□□□ -2.12
PRPF39-208ENST00000554785 SLC30A10Q6XR72 485 aa1.83□□□□□ -2.12
PRPF39-208ENST00000554785 TMPRSS9Q7Z410 1059 aa1.83□□□□□ -2.12
PRPF39-208ENST00000554785 SKAP1Q86WV1 359 aa1.83□□□□□ -2.12
PRPF39-208ENST00000554785 LIX1LQ8IVB5 337 aa1.83□□□□□ -2.12
PRPF39-208ENST00000554785 OR2C3Q8N628 320 aa1.83□□□□□ -2.12
PRPF39-208ENST00000554785 RNF152Q8N8N0 203 aa1.83□□□□□ -2.12
PRPF39-208ENST00000554785 ATP11CQ8NB49 1132 aa1.83□□□□□ -2.12
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms