RNA–Protein interactions for RNA: ENST00000554731.1

RDH11-207, Transcript of retinol dehydrogenase 11, humanhuman

TSL 3

Gene RDH11, Length 888 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RDH11-207ENST00000554731 P2RY2P41231 377 aa13.26□□□□□ -0.29
RDH11-207ENST00000554731 TNFRSF4P43489 277 aa13.26□□□□□ -0.29
RDH11-207ENST00000554731 MYL6P60660 151 aa13.26□□□□□ -0.29
RDH11-207ENST00000554731 IRX4P78413 519 aa13.26□□□□□ -0.29
RDH11-207ENST00000554731 KDSRQ06136 332 aa13.26□□□□□ -0.29
RDH11-207ENST00000554731 ZNF252P-AS1Q0IIN9 211 aa13.26□□□□□ -0.29
RDH11-207ENST00000554731 MESP2Q0VG99 397 aa13.26□□□□□ -0.29
RDH11-207ENST00000554731 BYSLQ13895 437 aaKnown RBP13.26□□□□□ -0.29
RDH11-207ENST00000554731 SH3PXD2AQ5TCZ1 1133 aa13.26□□□□□ -0.29
RDH11-207ENST00000554731 CNNM4Q6P4Q7 775 aa13.26□□□□□ -0.29
RDH11-207ENST00000554731 LPCAT2Q7L5N7 544 aa13.26□□□□□ -0.29
RDH11-207ENST00000554731 C12orf40Q86WS4 652 aa13.26□□□□□ -0.29
RDH11-207ENST00000554731 SFTPA1Q8IWL2 248 aa13.26□□□□□ -0.29
RDH11-207ENST00000554731 NELFCDQ8IXH7 590 aa13.26□□□□□ -0.29
RDH11-207ENST00000554731 IQUBQ8NA54 791 aa13.26□□□□□ -0.29
RDH11-207ENST00000554731 RLN3Q8WXF3 142 aa13.26□□□□□ -0.29
RDH11-207ENST00000554731 OVCA2Q8WZ82 227 aa13.26□□□□□ -0.29
RDH11-207ENST00000554731 FBXO32Q969P5 355 aa13.26□□□□□ -0.29
RDH11-207ENST00000554731 SYAP1Q96A49 352 aaPredicted RBP13.26□□□□□ -0.29
RDH11-207ENST00000554731 OTUB2Q96DC9 234 aa13.26□□□□□ -0.29
RDH11-207ENST00000554731 BCCIPQ9P287 314 aaKnown RBP eCLIP13.26□□□□□ -0.29
RDH11-207ENST00000554731 EVLQ9UI08 416 aaPredicted RBP13.26□□□□□ -0.29
RDH11-207ENST00000554731 CHD6Q8TD26 2715 aa13.26□□□□□ -0.29
RDH11-207ENST00000554731 CACNA1GO43497 2377 aa13.25□□□□□ -0.29
RDH11-207ENST00000554731 CDX4O14627 284 aaPredicted RBP13.25□□□□□ -0.29
RDH11-207ENST00000554731 TNFRSF10BO14763 440 aa13.25□□□□□ -0.29
RDH11-207ENST00000554731 COCHO43405 550 aa13.25□□□□□ -0.29
RDH11-207ENST00000554731 PHACTR2O75167 634 aa13.25□□□□□ -0.29
RDH11-207ENST00000554731 PPP6R2O75170 966 aa13.25□□□□□ -0.29
RDH11-207ENST00000554731 CLSTN1O94985 981 aa13.25□□□□□ -0.29
RDH11-207ENST00000554731 CENPBP07199 599 aaPredicted RBP13.25□□□□□ -0.29
RDH11-207ENST00000554731 PROS1P07225 676 aa13.25□□□□□ -0.29
RDH11-207ENST00000554731 CHRM1P11229 460 aaPredicted RBP13.25□□□□□ -0.29
RDH11-207ENST00000554731 CEACAM1P13688 526 aa13.25□□□□□ -0.29
RDH11-207ENST00000554731 CSRP1P21291 193 aaKnown RBP13.25□□□□□ -0.29
RDH11-207ENST00000554731 KIR2DL1P43626 348 aaPredicted RBP13.25□□□□□ -0.29
RDH11-207ENST00000554731 GAD2Q05329 585 aa13.25□□□□□ -0.29
RDH11-207ENST00000554731 LMAN2Q12907 356 aa13.25□□□□□ -0.29
RDH11-207ENST00000554731 LY6G5CQ5SRR4 150 aa13.25□□□□□ -0.29
RDH11-207ENST00000554731 HECTD3Q5T447 861 aa13.25□□□□□ -0.29
RDH11-207ENST00000554731 EMC10Q5UCC4 262 aa13.25□□□□□ -0.29
RDH11-207ENST00000554731 BTBD8Q5XKL5 378 aa13.25□□□□□ -0.29
RDH11-207ENST00000554731 SCFD1Q8WVM8 642 aa13.25□□□□□ -0.29
RDH11-207ENST00000554731 HMGB4Q8WW32 186 aa13.25□□□□□ -0.29
RDH11-207ENST00000554731 ZNF396Q96N95 335 aaPredicted RBP13.25□□□□□ -0.29
RDH11-207ENST00000554731 C7orf25Q9BPX7 421 aa13.25□□□□□ -0.29
RDH11-207ENST00000554731 MED10Q9BTT4 135 aa13.25□□□□□ -0.29
RDH11-207ENST00000554731 XYLT2Q9H1B5 865 aa13.25□□□□□ -0.29
RDH11-207ENST00000554731 CGNQ9P2M7 1197 aaKnown RBP13.25□□□□□ -0.29
RDH11-207ENST00000554731 SH3BP1Q9Y3L3 701 aa13.25□□□□□ -0.29
RDH11-207ENST00000554731 MYO18AQ92614 2054 aaKnown RBP13.24□□□□□ -0.29
RDH11-207ENST00000554731 MYOFQ9NZM1 2061 aa13.24□□□□□ -0.29
RDH11-207ENST00000554731 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa13.24□□□□□ -0.29
RDH11-207ENST00000554731 TCRBV21S2A2A0A5A6 115 aa13.24□□□□□ -0.29
RDH11-207ENST00000554731 TBC1D3BA6NDS4 549 aa13.24□□□□□ -0.29
RDH11-207ENST00000554731 CUTAO60888 179 aa13.24□□□□□ -0.29
RDH11-207ENST00000554731 DPP6P42658 865 aa13.24□□□□□ -0.29
RDH11-207ENST00000554731 EHHADHQ08426 723 aa13.24□□□□□ -0.29
RDH11-207ENST00000554731 FOXC1Q12948 553 aa13.24□□□□□ -0.29
RDH11-207ENST00000554731 BIRC3Q13489 604 aa13.24□□□□□ -0.29
RDH11-207ENST00000554731 ZNF699Q32M78 642 aa13.24□□□□□ -0.29
RDH11-207ENST00000554731 UAP1L1Q3KQV9 507 aa13.24□□□□□ -0.29
RDH11-207ENST00000554731 PREPLQ4J6C6 727 aaPredicted RBP13.24□□□□□ -0.29
RDH11-207ENST00000554731 TRIM61Q5EBN2 209 aa13.24□□□□□ -0.29
RDH11-207ENST00000554731 SPDYCQ5MJ68 293 aa13.24□□□□□ -0.29
RDH11-207ENST00000554731 UNC13DQ70J99 1090 aa13.24□□□□□ -0.29
RDH11-207ENST00000554731 FAM35AQ86V20 835 aa13.24□□□□□ -0.29
RDH11-207ENST00000554731 SYT12Q8IV01 421 aa13.24□□□□□ -0.29
RDH11-207ENST00000554731 C12orf56Q8IXR9 622 aa13.24□□□□□ -0.29
RDH11-207ENST00000554731 TMEFF1Q8IYR6 380 aa13.24□□□□□ -0.29
RDH11-207ENST00000554731 PGBD3Q8N328 593 aa13.24□□□□□ -0.29
RDH11-207ENST00000554731 SCAMP5Q8TAC9 235 aa13.24□□□□□ -0.29
RDH11-207ENST00000554731 ZNF516Q92618 1163 aa13.24□□□□□ -0.29
RDH11-207ENST00000554731 TNIP3Q96KP6 325 aa13.24□□□□□ -0.29
RDH11-207ENST00000554731 ZFRQ96KR1 1074 aaKnown RBP13.24□□□□□ -0.29
RDH11-207ENST00000554731 KCNK16Q96T55 309 aa13.24□□□□□ -0.29
RDH11-207ENST00000554731 NUSAP1Q9BXS6 441 aaKnown RBP13.24□□□□□ -0.29
RDH11-207ENST00000554731 GZF1Q9H116 711 aaPredicted RBP13.24□□□□□ -0.29
RDH11-207ENST00000554731 SMYD3Q9H7B4 428 aa13.24□□□□□ -0.29
RDH11-207ENST00000554731 MAGEF1Q9HAY2 307 aa13.24□□□□□ -0.29
RDH11-207ENST00000554731 DMAP1Q9NPF5 467 aaPredicted RBP13.24□□□□□ -0.29
RDH11-207ENST00000554731 FOXD4L1Q9NU39 408 aa13.24□□□□□ -0.29
RDH11-207ENST00000554731 TFIP11Q9UBB9 837 aaKnown RBP13.24□□□□□ -0.29
RDH11-207ENST00000554731 CHORDC1Q9UHD1 332 aaPredicted RBP13.24□□□□□ -0.29
RDH11-207ENST00000554731 ASCC3Q8N3C0 2202 aaKnown RBP13.24□□□□□ -0.29
RDH11-207ENST00000554731 HOXC11O43248 304 aaPredicted RBP13.23□□□□□ -0.29
RDH11-207ENST00000554731 EXOC3O60645 756 aa13.23□□□□□ -0.29
RDH11-207ENST00000554731 ADAM23O75077 832 aa13.23□□□□□ -0.29
RDH11-207ENST00000554731 YEATS4O95619 227 aa13.23□□□□□ -0.29
RDH11-207ENST00000554731 TUBP50607 506 aa13.23□□□□□ -0.29
RDH11-207ENST00000554731 SLC5A3P53794 718 aa13.23□□□□□ -0.29
RDH11-207ENST00000554731 CDH8P55286 799 aa13.23□□□□□ -0.29
RDH11-207ENST00000554731 BMT2Q1RMZ1 405 aa13.23□□□□□ -0.29
RDH11-207ENST00000554731 MAP7D1Q3KQU3 841 aa13.23□□□□□ -0.29
RDH11-207ENST00000554731 ZNF667Q5HYK9 610 aa13.23□□□□□ -0.29
RDH11-207ENST00000554731 SNX30Q5VWJ9 437 aa13.23□□□□□ -0.29
RDH11-207ENST00000554731 LYSMD4Q5XG99 296 aa13.23□□□□□ -0.29
RDH11-207ENST00000554731 SHC4Q6S5L8 630 aa13.23□□□□□ -0.29
RDH11-207ENST00000554731 UNQ6494/PRO21346Q6UXR6 183 aa13.23□□□□□ -0.29
RDH11-207ENST00000554731 NUDT18Q6ZVK8 323 aa13.23□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms