RNA–Protein interactions for RNA: ENST00000554677.1

MTHFD1-207, Transcript of methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1, humanhuman

TSL 3

Gene MTHFD1, Length 783 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFD1-207ENST00000554677 PGFP49763 221 aa12.99□□□□□ -0.33
MTHFD1-207ENST00000554677 DGKEP52429 567 aa12.99□□□□□ -0.33
MTHFD1-207ENST00000554677 SEC13P55735 322 aa12.99□□□□□ -0.33
MTHFD1-207ENST00000554677 STK4Q13043 487 aa12.99□□□□□ -0.33
MTHFD1-207ENST00000554677 TRPC3Q13507 836 aa12.99□□□□□ -0.33
MTHFD1-207ENST00000554677 PKP1Q13835 747 aa12.99□□□□□ -0.33
MTHFD1-207ENST00000554677 N4BP2L1Q5TBK1 243 aaPredicted RBP12.99□□□□□ -0.33
MTHFD1-207ENST00000554677 EMC10Q5UCC4 262 aa12.99□□□□□ -0.33
MTHFD1-207ENST00000554677 SNX30Q5VWJ9 437 aa12.99□□□□□ -0.33
MTHFD1-207ENST00000554677 TCEAL6Q6IPX3 200 aa12.99□□□□□ -0.33
MTHFD1-207ENST00000554677 PHTF2Q8N3S3 785 aa12.99□□□□□ -0.33
MTHFD1-207ENST00000554677 CCDC33Q8N5R6 958 aa12.99□□□□□ -0.33
MTHFD1-207ENST00000554677 C12orf50Q8NA57 414 aaPredicted RBP12.99□□□□□ -0.33
MTHFD1-207ENST00000554677 KIAA0895Q8NCT3 520 aa12.99□□□□□ -0.33
MTHFD1-207ENST00000554677 ZMIZ2Q8NF64 920 aa12.99□□□□□ -0.33
MTHFD1-207ENST00000554677 TMEM174Q8WUU8 243 aa12.99□□□□□ -0.33
MTHFD1-207ENST00000554677 TCEAL3Q969E4 200 aa12.99□□□□□ -0.33
MTHFD1-207ENST00000554677 WBP2Q969T9 261 aa12.99□□□□□ -0.33
MTHFD1-207ENST00000554677 SYAP1Q96A49 352 aaPredicted RBP12.99□□□□□ -0.33
MTHFD1-207ENST00000554677 ELOVL4Q9GZR5 314 aa12.99□□□□□ -0.33
MTHFD1-207ENST00000554677 KCTD10Q9H3F6 313 aa12.99□□□□□ -0.33
MTHFD1-207ENST00000554677 VPS45Q9NRW7 570 aa12.99□□□□□ -0.33
MTHFD1-207ENST00000554677 EHD2Q9NZN4 543 aa12.99□□□□□ -0.33
MTHFD1-207ENST00000554677 CFAP97Q9P2B7 532 aa12.99□□□□□ -0.33
MTHFD1-207ENST00000554677 SERTAD1Q9UHV2 236 aa12.99□□□□□ -0.33
MTHFD1-207ENST00000554677 RCOR1Q9UKL0 485 aa12.99□□□□□ -0.33
MTHFD1-207ENST00000554677 MMP17Q9ULZ9 603 aa12.99□□□□□ -0.33
MTHFD1-207ENST00000554677 FAM92AA1XBS5 289 aa12.98□□□□□ -0.33
MTHFD1-207ENST00000554677 COCHO43405 550 aa12.98□□□□□ -0.33
MTHFD1-207ENST00000554677 ACTN4O43707 911 aaKnown RBP12.98□□□□□ -0.33
MTHFD1-207ENST00000554677 EXOC3O60645 756 aa12.98□□□□□ -0.33
MTHFD1-207ENST00000554677 KRT37O76014 449 aa12.98□□□□□ -0.33
MTHFD1-207ENST00000554677 RHOBTB1O94844 696 aa12.98□□□□□ -0.33
MTHFD1-207ENST00000554677 ZDHHC11BP0C7U3 371 aa12.98□□□□□ -0.33
MTHFD1-207ENST00000554677 BCKDHBP21953 392 aa12.98□□□□□ -0.33
MTHFD1-207ENST00000554677 KIR2DL1P43626 348 aaPredicted RBP12.98□□□□□ -0.33
MTHFD1-207ENST00000554677 DLG4P78352 724 aa12.98□□□□□ -0.33
MTHFD1-207ENST00000554677 MRPS21P82921 87 aaKnown RBP12.98□□□□□ -0.33
MTHFD1-207ENST00000554677 IFRD2Q12894 506 aaPredicted RBP12.98□□□□□ -0.33
MTHFD1-207ENST00000554677 CRY1Q16526 586 aa12.98□□□□□ -0.33
MTHFD1-207ENST00000554677 SLC9A9Q8IVB4 645 aa12.98□□□□□ -0.33
MTHFD1-207ENST00000554677 FUKQ8N0W3 1084 aa12.98□□□□□ -0.33
MTHFD1-207ENST00000554677 OLIG1Q8TAK6 271 aa12.98□□□□□ -0.33
MTHFD1-207ENST00000554677 DDX1Q92499 740 aaKnown RBP12.98□□□□□ -0.33
MTHFD1-207ENST00000554677 FBXO32Q969P5 355 aa12.98□□□□□ -0.33
MTHFD1-207ENST00000554677 SLITRK1Q96PX8 696 aa12.98□□□□□ -0.33
MTHFD1-207ENST00000554677 LSM14BQ9BX40 385 aaKnown RBP12.98□□□□□ -0.33
MTHFD1-207ENST00000554677 TPSD1Q9BZJ3 242 aa12.98□□□□□ -0.33
MTHFD1-207ENST00000554677 ADAMTS9Q9P2N4 1935 aa12.98□□□□□ -0.33
MTHFD1-207ENST00000554677 CEP295Q9C0D2 2601 aa12.97□□□□□ -0.33
MTHFD1-207ENST00000554677 E2F8A0AVK6 867 aa12.97□□□□□ -0.33
MTHFD1-207ENST00000554677 SGK1O00141 431 aa12.97□□□□□ -0.33
MTHFD1-207ENST00000554677 SLC9A3R1O14745 358 aaPredicted RBP12.97□□□□□ -0.33
MTHFD1-207ENST00000554677 PHACTR2O75167 634 aa12.97□□□□□ -0.33
MTHFD1-207ENST00000554677 BEST1O76090 585 aa12.97□□□□□ -0.33
MTHFD1-207ENST00000554677 RTN3O95197 1032 aaPredicted RBP12.97□□□□□ -0.33
MTHFD1-207ENST00000554677 KAT7O95251 611 aa12.97□□□□□ -0.33
MTHFD1-207ENST00000554677 CAVIN2O95810 425 aa12.97□□□□□ -0.33
MTHFD1-207ENST00000554677 SLFN14P0C7P3 912 aa12.97□□□□□ -0.33
MTHFD1-207ENST00000554677 MBL2P11226 248 aaPredicted RBP12.97□□□□□ -0.33
MTHFD1-207ENST00000554677 PMLP29590 882 aa12.97□□□□□ -0.33
MTHFD1-207ENST00000554677 EIF2DP41214 584 aaKnown RBP12.97□□□□□ -0.33
MTHFD1-207ENST00000554677 ME1P48163 572 aa12.97□□□□□ -0.33
MTHFD1-207ENST00000554677 CREB5Q02930 508 aa12.97□□□□□ -0.33
MTHFD1-207ENST00000554677 DNM1Q05193 864 aaKnown RBP12.97□□□□□ -0.33
MTHFD1-207ENST00000554677 NCOA4Q13772 614 aa12.97□□□□□ -0.33
MTHFD1-207ENST00000554677 LY6G5CQ5SRR4 150 aa12.97□□□□□ -0.33
MTHFD1-207ENST00000554677 C1orf220Q5T0J3 134 aa12.97□□□□□ -0.33
MTHFD1-207ENST00000554677 PMS2CLQ68D20 193 aa12.97□□□□□ -0.33
MTHFD1-207ENST00000554677 IL31Q6EBC2 164 aa12.97□□□□□ -0.33
MTHFD1-207ENST00000554677 FAM35AQ86V20 835 aa12.97□□□□□ -0.33
MTHFD1-207ENST00000554677 ETFBKMTQ8IXQ9 262 aa12.97□□□□□ -0.33
MTHFD1-207ENST00000554677 CRYBG2Q8N1P7 616 aa12.97□□□□□ -0.33
MTHFD1-207ENST00000554677 IL17RCQ8NAC3 791 aa12.97□□□□□ -0.33
MTHFD1-207ENST00000554677 MDGA1Q8NFP4 955 aa12.97□□□□□ -0.33
MTHFD1-207ENST00000554677 TSTD1Q8NFU3 115 aa12.97□□□□□ -0.33
MTHFD1-207ENST00000554677 CCDC26Q8TAB7 109 aa12.97□□□□□ -0.33
MTHFD1-207ENST00000554677 OVCA2Q8WZ82 227 aa12.97□□□□□ -0.33
MTHFD1-207ENST00000554677 PAGE5Q96GU1 130 aa12.97□□□□□ -0.33
MTHFD1-207ENST00000554677 CNOT6LQ96LI5 555 aaKnown RBP12.97□□□□□ -0.33
MTHFD1-207ENST00000554677 PNKPQ96T60 521 aa12.97□□□□□ -0.33
MTHFD1-207ENST00000554677 SMOQ99835 787 aa12.97□□□□□ -0.33
MTHFD1-207ENST00000554677 CCSER2Q9H7U1 834 aa12.97□□□□□ -0.33
MTHFD1-207ENST00000554677 FAM13BQ9NYF5 915 aa12.97□□□□□ -0.33
MTHFD1-207ENST00000554677 HCN2Q9UL51 889 aa12.97□□□□□ -0.33
MTHFD1-207ENST00000554677 KNL1Q8NG31 2342 aa12.96□□□□□ -0.33
MTHFD1-207ENST00000554677 GREM1O60565 184 aa12.96□□□□□ -0.33
MTHFD1-207ENST00000554677 ADAM23O75077 832 aa12.96□□□□□ -0.33
MTHFD1-207ENST00000554677 ADH5P11766 374 aa12.96□□□□□ -0.33
MTHFD1-207ENST00000554677 TIE1P35590 1138 aa12.96□□□□□ -0.33
MTHFD1-207ENST00000554677 AP3M2P53677 418 aa12.96□□□□□ -0.33
MTHFD1-207ENST00000554677 SLC5A3P53794 718 aa12.96□□□□□ -0.33
MTHFD1-207ENST00000554677 BIRC3Q13489 604 aa12.96□□□□□ -0.33
MTHFD1-207ENST00000554677 ELF2Q15723 593 aa12.96□□□□□ -0.33
MTHFD1-207ENST00000554677 ZNF699Q32M78 642 aa12.96□□□□□ -0.33
MTHFD1-207ENST00000554677 ZACNQ401N2 412 aa12.96□□□□□ -0.33
MTHFD1-207ENST00000554677 KMT5BQ4FZB7 885 aa12.96□□□□□ -0.33
MTHFD1-207ENST00000554677 USP39Q53GS9 565 aaKnown RBP12.96□□□□□ -0.33
MTHFD1-207ENST00000554677 ZNF667Q5HYK9 610 aa12.96□□□□□ -0.33
MTHFD1-207ENST00000554677 HECTD3Q5T447 861 aa12.96□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms