RNA–Protein interactions for RNA: ENST00000554584.5

SYNE2-212, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 5 BASIC

Gene SYNE2, Length 20,508 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-212ENST00000554584 ZNF445P59923 1031 aa3.42□□□□□ -1.86
SYNE2-212ENST00000554584 PFKPQ01813 784 aa3.42□□□□□ -1.86
SYNE2-212ENST00000554584 FBXO48Q5FWF7 155 aa3.42□□□□□ -1.86
SYNE2-212ENST00000554584 FAM102AQ5T9C2 384 aaPredicted RBP3.42□□□□□ -1.86
SYNE2-212ENST00000554584 RASSF6Q6ZTQ3 369 aa3.42□□□□□ -1.86
SYNE2-212ENST00000554584 ZNF227Q86WZ6 799 aa3.42□□□□□ -1.86
SYNE2-212ENST00000554584 OR8K1Q8NGG5 319 aa3.42□□□□□ -1.86
SYNE2-212ENST00000554584 THAP11Q96EK4 314 aa3.42□□□□□ -1.86
SYNE2-212ENST00000554584 GPRC5CQ9NQ84 441 aa3.42□□□□□ -1.86
SYNE2-212ENST00000554584 KIF26BQ2KJY2 2108 aa3.42□□□□□ -1.86
SYNE2-212ENST00000554584 LRRC9Q6ZRR7 1453 aa3.42□□□□□ -1.86
SYNE2-212ENST00000554584 CUL4AQ13619 759 aa3.42□□□□□ -1.86
SYNE2-212ENST00000554584 MCTP2Q6DN12 878 aa3.42□□□□□ -1.86
SYNE2-212ENST00000554584 TLK2Q86UE8 772 aa3.42□□□□□ -1.86
SYNE2-212ENST00000554584 LRRC8AQ8IWT6 810 aa3.42□□□□□ -1.86
SYNE2-212ENST00000554584 MARK4Q96L34 752 aa3.42□□□□□ -1.86
SYNE2-212ENST00000554584 FICDQ9BVA6 458 aa3.42□□□□□ -1.86
SYNE2-212ENST00000554584 TRIT1Q9H3H1 467 aaKnown RBP3.42□□□□□ -1.86
SYNE2-212ENST00000554584 ZCCHC17Q9NP64 241 aaKnown RBP3.42□□□□□ -1.86
SYNE2-212ENST00000554584 NSMCE4AQ9NXX6 385 aa3.42□□□□□ -1.86
SYNE2-212ENST00000554584 GMIPQ9P107 970 aa3.42□□□□□ -1.86
SYNE2-212ENST00000554584 PCDHA6Q9UN73 950 aa3.42□□□□□ -1.86
SYNE2-212ENST00000554584 PCDHA8Q9Y5H6 950 aa3.42□□□□□ -1.86
SYNE2-212ENST00000554584 TTC24A2A3L6 582 aaPredicted RBP3.42□□□□□ -1.86
SYNE2-212ENST00000554584 NDUFS3O75489 264 aa3.42□□□□□ -1.86
SYNE2-212ENST00000554584 PCP11498 1178 aaKnown RBP3.42□□□□□ -1.86
SYNE2-212ENST00000554584 PDIA2Q13087 525 aaKnown RBP3.42□□□□□ -1.86
SYNE2-212ENST00000554584 BTG3Q14201 252 aaPredicted RBP3.42□□□□□ -1.86
SYNE2-212ENST00000554584 DGKDQ16760 1214 aa3.42□□□□□ -1.86
SYNE2-212ENST00000554584 SPPL2BQ8TCT7 592 aa3.42□□□□□ -1.86
SYNE2-212ENST00000554584 ATL1Q8WXF7 558 aa3.42□□□□□ -1.86
SYNE2-212ENST00000554584 CDKL2Q92772 493 aa3.42□□□□□ -1.86
SYNE2-212ENST00000554584 KIAA1257Q9ULG3 409 aa3.42□□□□□ -1.86
SYNE2-212ENST00000554584 A0A087WUV0 522 aaPredicted RBP3.42□□□□□ -1.86
SYNE2-212ENST00000554584 ZCCHC18P0CG32 403 aa3.42□□□□□ -1.86
SYNE2-212ENST00000554584 MAGP20916 626 aa3.42□□□□□ -1.86
SYNE2-212ENST00000554584 PSEN1P49768 467 aa3.42□□□□□ -1.86
SYNE2-212ENST00000554584 CLCN3P51790 818 aa3.42□□□□□ -1.86
SYNE2-212ENST00000554584 SP140Q13342 867 aa3.42□□□□□ -1.86
SYNE2-212ENST00000554584 PPA1Q15181 289 aa3.42□□□□□ -1.86
SYNE2-212ENST00000554584 PACS1Q6VY07 963 aa3.42□□□□□ -1.86
SYNE2-212ENST00000554584 OSCP1Q8WVF1 389 aa3.42□□□□□ -1.86
SYNE2-212ENST00000554584 FAR2Q96K12 515 aa3.42□□□□□ -1.86
SYNE2-212ENST00000554584 CAMKK2Q96RR4 588 aa3.42□□□□□ -1.86
SYNE2-212ENST00000554584 MANSC1Q9H8J5 431 aa3.42□□□□□ -1.86
SYNE2-212ENST00000554584 MCCC2Q9HCC0 563 aa3.42□□□□□ -1.86
SYNE2-212ENST00000554584 FGFR1OP2Q9NVK5 253 aa3.42□□□□□ -1.86
SYNE2-212ENST00000554584 HAO2Q9NYQ3 351 aa3.42□□□□□ -1.86
SYNE2-212ENST00000554584 CNOT8Q9UFF9 292 aaKnown RBP3.42□□□□□ -1.86
SYNE2-212ENST00000554584 A6NL46 340 aa3.42□□□□□ -1.86
SYNE2-212ENST00000554584 ASS1P00966 412 aaKnown RBP3.42□□□□□ -1.86
SYNE2-212ENST00000554584 SKP1P63208 163 aa3.42□□□□□ -1.86
SYNE2-212ENST00000554584 KCNB1Q14721 858 aa3.42□□□□□ -1.86
SYNE2-212ENST00000554584 ATL3Q6DD88 541 aa3.42□□□□□ -1.86
SYNE2-212ENST00000554584 LIPHQ8WWY8 451 aa3.42□□□□□ -1.86
SYNE2-212ENST00000554584 SYBUQ9NX95 663 aa3.42□□□□□ -1.86
SYNE2-212ENST00000554584 COPEO14579 308 aa3.42□□□□□ -1.86
SYNE2-212ENST00000554584 ACSL4O60488 711 aa3.42□□□□□ -1.86
SYNE2-212ENST00000554584 KRT16P08779 473 aa3.42□□□□□ -1.86
SYNE2-212ENST00000554584 ZNF865P0CJ78 1059 aaPredicted RBP3.42□□□□□ -1.86
SYNE2-212ENST00000554584 PHKG2P15735 406 aa3.42□□□□□ -1.86
SYNE2-212ENST00000554584 PUDPQ08623 228 aa3.42□□□□□ -1.86
SYNE2-212ENST00000554584 OVGP1Q12889 678 aa3.42□□□□□ -1.86
SYNE2-212ENST00000554584 C6orf118Q5T5N4 469 aa3.42□□□□□ -1.86
SYNE2-212ENST00000554584 ZNF57Q68EA5 555 aaPredicted RBP3.42□□□□□ -1.86
SYNE2-212ENST00000554584 PPP4R3CPQ6ZMV5 832 aa3.42□□□□□ -1.86
SYNE2-212ENST00000554584 P4HA3Q7Z4N8 544 aa3.42□□□□□ -1.86
SYNE2-212ENST00000554584 VANGL1Q8TAA9 524 aaPredicted RBP3.42□□□□□ -1.86
SYNE2-212ENST00000554584 MSANTD3Q96H12 275 aa3.42□□□□□ -1.86
SYNE2-212ENST00000554584 TRNT1Q96Q11 434 aaKnown RBP3.42□□□□□ -1.86
SYNE2-212ENST00000554584 OLFM1Q99784 485 aa3.42□□□□□ -1.86
SYNE2-212ENST00000554584 MRPS26Q9BYN8 205 aaKnown RBP3.42□□□□□ -1.86
SYNE2-212ENST00000554584 PARVGQ9HBI0 331 aa3.42□□□□□ -1.86
SYNE2-212ENST00000554584 MORC2Q9Y6X9 1032 aaPredicted RBP3.42□□□□□ -1.86
SYNE2-212ENST00000554584 NUP214P35658 2090 aaPredicted RBP3.42□□□□□ -1.86
SYNE2-212ENST00000554584 SPTBN1Q01082 2364 aaKnown RBP3.42□□□□□ -1.86
SYNE2-212ENST00000554584 CASKIN1Q8WXD9 1431 aa3.42□□□□□ -1.86
SYNE2-212ENST00000554584 NFKB1P19838 968 aa3.42□□□□□ -1.86
SYNE2-212ENST00000554584 PRIM2P49643 509 aa3.42□□□□□ -1.86
SYNE2-212ENST00000554584 FOXM1Q08050 763 aa3.42□□□□□ -1.86
SYNE2-212ENST00000554584 MILR1Q7Z6M3 343 aa3.42□□□□□ -1.86
SYNE2-212ENST00000554584 STX12Q86Y82 276 aa3.42□□□□□ -1.86
SYNE2-212ENST00000554584 SLC9A9Q8IVB4 645 aa3.42□□□□□ -1.86
SYNE2-212ENST00000554584 CDKL3Q8IVW4 592 aaPredicted RBP3.42□□□□□ -1.86
SYNE2-212ENST00000554584 SPATA16Q9BXB7 569 aa3.42□□□□□ -1.86
SYNE2-212ENST00000554584 TBC1D10AQ9BXI6 508 aa3.42□□□□□ -1.86
SYNE2-212ENST00000554584 PUS7LQ9H0K6 701 aaKnown RBP3.42□□□□□ -1.86
SYNE2-212ENST00000554584 TNFSF13BQ9Y275 285 aa3.42□□□□□ -1.86
SYNE2-212ENST00000554584 KANSL1LA0AUZ9 987 aa3.41□□□□□ -1.86
SYNE2-212ENST00000554584 PRKCBP05771 671 aa3.41□□□□□ -1.86
SYNE2-212ENST00000554584 HIST1H2AGP0C0S8 130 aaPredicted RBP3.41□□□□□ -1.86
SYNE2-212ENST00000554584 HIST1H2ADP20671 130 aa3.41□□□□□ -1.86
SYNE2-212ENST00000554584 EIF3BP55884 814 aaKnown RBP3.41□□□□□ -1.86
SYNE2-212ENST00000554584 OCA2Q04671 838 aa3.41□□□□□ -1.86
SYNE2-212ENST00000554584 COG2Q14746 738 aa3.41□□□□□ -1.86
SYNE2-212ENST00000554584 P3H1Q32P28 736 aa3.41□□□□□ -1.86
SYNE2-212ENST00000554584 NAPRTQ6XQN6 538 aa3.41□□□□□ -1.86
SYNE2-212ENST00000554584 COL23A1Q86Y22 540 aaPredicted RBP3.41□□□□□ -1.86
SYNE2-212ENST00000554584 TMEM130Q8N3G9 435 aa3.41□□□□□ -1.86
SYNE2-212ENST00000554584 FBXO15Q8NCQ5 510 aaPredicted RBP3.41□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms