RNA–Protein interactions for RNA: ENST00000554548.1

AL139317.1-201, humanhuman

TSL 3 BASIC

Gene AL139317.1, Length 196 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AL139317.1-201ENST00000554548 RFPL2O75678 378 aa12.69□□□□□ -0.38
AL139317.1-201ENST00000554548 CST3P01034 146 aaPredicted RBP12.69□□□□□ -0.38
AL139317.1-201ENST00000554548 FGGP02679 453 aa12.69□□□□□ -0.38
AL139317.1-201ENST00000554548 OAS2P29728 719 aaKnown RBP12.69□□□□□ -0.38
AL139317.1-201ENST00000554548 CDH5P33151 784 aaPredicted RBP12.69□□□□□ -0.38
AL139317.1-201ENST00000554548 OR1D2P34982 312 aa12.69□□□□□ -0.38
AL139317.1-201ENST00000554548 SLC1A1P43005 524 aa12.69□□□□□ -0.38
AL139317.1-201ENST00000554548 TNNT3P45378 269 aaPredicted RBP12.69□□□□□ -0.38
AL139317.1-201ENST00000554548 ARPP19P56211 112 aa12.69□□□□□ -0.38
AL139317.1-201ENST00000554548 TFAMQ00059 246 aaKnown RBP12.69□□□□□ -0.38
AL139317.1-201ENST00000554548 SLC7A5Q01650 507 aa12.69□□□□□ -0.38
AL139317.1-201ENST00000554548 CUL1Q13616 776 aa12.69□□□□□ -0.38
AL139317.1-201ENST00000554548 MESDQ14696 234 aa12.69□□□□□ -0.38
AL139317.1-201ENST00000554548 LIN9Q5TKA1 542 aa12.69□□□□□ -0.38
AL139317.1-201ENST00000554548 NAA35Q5VZE5 725 aa12.69□□□□□ -0.38
AL139317.1-201ENST00000554548 LILRA6Q6PI73 481 aa12.69□□□□□ -0.38
AL139317.1-201ENST00000554548 ANKS3Q6ZW76 656 aa12.69□□□□□ -0.38
AL139317.1-201ENST00000554548 NT5DC4Q86YG4 428 aa12.69□□□□□ -0.38
AL139317.1-201ENST00000554548 TMEM130Q8N3G9 435 aa12.69□□□□□ -0.38
AL139317.1-201ENST00000554548 MREGQ8N565 214 aa12.69□□□□□ -0.38
AL139317.1-201ENST00000554548 SEC14L1Q92503 715 aa12.69□□□□□ -0.38
AL139317.1-201ENST00000554548 SMG7Q92540 1137 aaKnown RBP12.69□□□□□ -0.38
AL139317.1-201ENST00000554548 BCO2Q9BYV7 579 aa12.69□□□□□ -0.38
AL139317.1-201ENST00000554548 PLEKHA4Q9H4M7 779 aa12.69□□□□□ -0.38
AL139317.1-201ENST00000554548 MED4Q9NPJ6 270 aa12.69□□□□□ -0.38
AL139317.1-201ENST00000554548 CISHQ9NSE2 258 aa12.69□□□□□ -0.38
AL139317.1-201ENST00000554548 LCMT1Q9UIC8 334 aa12.69□□□□□ -0.38
AL139317.1-201ENST00000554548 PCDHGC3Q9UN70 934 aa12.69□□□□□ -0.38
AL139317.1-201ENST00000554548 PCDHA3Q9Y5H8 950 aa12.69□□□□□ -0.38
AL139317.1-201ENST00000554548 SCINQ9Y6U3 715 aa12.69□□□□□ -0.38
AL139317.1-201ENST00000554548 PLXNA3P51805 1871 aa12.69□□□□□ -0.38
AL139317.1-201ENST00000554548 PDCD11Q14690 1871 aaKnown RBP12.68□□□□□ -0.38
AL139317.1-201ENST00000554548 CITO14578 2027 aa12.68□□□□□ -0.38
AL139317.1-201ENST00000554548 H3BQF6 201 aa12.68□□□□□ -0.38
AL139317.1-201ENST00000554548 SART1O43290 800 aaKnown RBP12.68□□□□□ -0.38
AL139317.1-201ENST00000554548 THAP12O43422 761 aa12.68□□□□□ -0.38
AL139317.1-201ENST00000554548 SPOPO43791 374 aa12.68□□□□□ -0.38
AL139317.1-201ENST00000554548 STAU1O95793 577 aaKnown RBP12.68□□□□□ -0.38
AL139317.1-201ENST00000554548 CALCAP01258 141 aa12.68□□□□□ -0.38
AL139317.1-201ENST00000554548 NFICP08651 508 aa12.68□□□□□ -0.38
AL139317.1-201ENST00000554548 RRM1P23921 792 aa12.68□□□□□ -0.38
AL139317.1-201ENST00000554548 ATICP31939 592 aa12.68□□□□□ -0.38
AL139317.1-201ENST00000554548 MAN1A1P33908 653 aa12.68□□□□□ -0.38
AL139317.1-201ENST00000554548 GUCY2FP51841 1108 aa12.68□□□□□ -0.38
AL139317.1-201ENST00000554548 RNASE9P60153 205 aaKnown RBP12.68□□□□□ -0.38
AL139317.1-201ENST00000554548 GUCY2DQ02846 1103 aa12.68□□□□□ -0.38
AL139317.1-201ENST00000554548 PTP4A2Q12974 167 aa12.68□□□□□ -0.38
AL139317.1-201ENST00000554548 SEL1L2Q5TEA6 688 aa12.68□□□□□ -0.38
AL139317.1-201ENST00000554548 JADE1Q6IE81 842 aa12.68□□□□□ -0.38
AL139317.1-201ENST00000554548 PLEKHA7Q6IQ23 1121 aa12.68□□□□□ -0.38
AL139317.1-201ENST00000554548 CD302Q8IX05 232 aa12.68□□□□□ -0.38
AL139317.1-201ENST00000554548 KLHL7Q8IXQ5 586 aa12.68□□□□□ -0.38
AL139317.1-201ENST00000554548 CMASQ8NFW8 434 aaPredicted RBP12.68□□□□□ -0.38
AL139317.1-201ENST00000554548 CCDC26Q8TAB7 109 aa12.68□□□□□ -0.38
AL139317.1-201ENST00000554548 CXorf38Q8TB03 319 aa12.68□□□□□ -0.38
AL139317.1-201ENST00000554548 FAM71BQ8TC56 605 aa12.68□□□□□ -0.38
AL139317.1-201ENST00000554548 WHAMMQ8TF30 809 aa12.68□□□□□ -0.38
AL139317.1-201ENST00000554548 CASKIN2Q8WXE0 1202 aa12.68□□□□□ -0.38
AL139317.1-201ENST00000554548 KRT35Q92764 455 aa12.68□□□□□ -0.38
AL139317.1-201ENST00000554548 ACSF2Q96CM8 615 aaPredicted RBP12.68□□□□□ -0.38
AL139317.1-201ENST00000554548 CYFIP2Q96F07 1278 aa12.68□□□□□ -0.38
AL139317.1-201ENST00000554548 ZNF518BQ9C0D4 1074 aa12.68□□□□□ -0.38
AL139317.1-201ENST00000554548 MRPL47Q9HD33 250 aaKnown RBP12.68□□□□□ -0.38
AL139317.1-201ENST00000554548 LIMD1Q9UGP4 676 aa12.68□□□□□ -0.38
AL139317.1-201ENST00000554548 SIX4Q9UIU6 781 aa12.68□□□□□ -0.38
AL139317.1-201ENST00000554548 UBQLN1Q9UMX0 589 aaKnown RBP12.68□□□□□ -0.38
AL139317.1-201ENST00000554548 C2CD2Q9Y426 696 aa12.68□□□□□ -0.38
AL139317.1-201ENST00000554548 CDY1Q9Y6F8 540 aa12.68□□□□□ -0.38
AL139317.1-201ENST00000554548 NCOR1O75376 2440 aa12.67□□□□□ -0.38
AL139317.1-201ENST00000554548 TMEM110-MUSTN1A8MSY1 372 aa12.67□□□□□ -0.38
AL139317.1-201ENST00000554548 C2CD4DB7Z1M9 353 aa12.67□□□□□ -0.38
AL139317.1-201ENST00000554548 H7C4K7 107 aa12.67□□□□□ -0.38
AL139317.1-201ENST00000554548 GPR37L1O60883 481 aa12.67□□□□□ -0.38
AL139317.1-201ENST00000554548 C1RP00736 705 aa12.67□□□□□ -0.38
AL139317.1-201ENST00000554548 CALB1P05937 261 aa12.67□□□□□ -0.38
AL139317.1-201ENST00000554548 MARCKSL1P49006 195 aa12.67□□□□□ -0.38
AL139317.1-201ENST00000554548 RWDD2BP57060 319 aa12.67□□□□□ -0.38
AL139317.1-201ENST00000554548 RAB33AQ14088 237 aa12.67□□□□□ -0.38
AL139317.1-201ENST00000554548 DHX34Q14147 1143 aaKnown RBP12.67□□□□□ -0.38
AL139317.1-201ENST00000554548 TMEM132DQ14C87 1099 aa12.67□□□□□ -0.38
AL139317.1-201ENST00000554548 ZBTB6Q15916 424 aa12.67□□□□□ -0.38
AL139317.1-201ENST00000554548 PPM1LQ5SGD2 360 aa12.67□□□□□ -0.38
AL139317.1-201ENST00000554548 VARS2Q5ST30 1063 aaKnown RBP12.67□□□□□ -0.38
AL139317.1-201ENST00000554548 DSTYKQ6XUX3 929 aa12.67□□□□□ -0.38
AL139317.1-201ENST00000554548 CCDC149Q6ZUS6 474 aa12.67□□□□□ -0.38
AL139317.1-201ENST00000554548 SND1Q7KZF4 910 aaKnown RBP eCLIP12.67□□□□□ -0.38
AL139317.1-201ENST00000554548 MAATS1Q7Z4T9 603 aa12.67□□□□□ -0.38
AL139317.1-201ENST00000554548 C1orf127Q8N9H9 656 aa12.67□□□□□ -0.38
AL139317.1-201ENST00000554548 TDRD5Q8NAT2 981 aaKnown RBP12.67□□□□□ -0.38
AL139317.1-201ENST00000554548 BEST2Q8NFU1 509 aa12.67□□□□□ -0.38
AL139317.1-201ENST00000554548 ZNF606Q8WXB4 792 aa12.67□□□□□ -0.38
AL139317.1-201ENST00000554548 CPA5Q8WXQ8 436 aa12.67□□□□□ -0.38
AL139317.1-201ENST00000554548 RUNDC3BQ96NL0 473 aa12.67□□□□□ -0.38
AL139317.1-201ENST00000554548 LRFN3Q9BTN0 628 aa12.67□□□□□ -0.38
AL139317.1-201ENST00000554548 AP1M1Q9BXS5 423 aa12.67□□□□□ -0.38
AL139317.1-201ENST00000554548 DDX47Q9H0S4 455 aaKnown RBP12.67□□□□□ -0.38
AL139317.1-201ENST00000554548 EPB41L5Q9HCM4 733 aa12.67□□□□□ -0.38
AL139317.1-201ENST00000554548 ST7Q9NRC1 585 aa12.67□□□□□ -0.38
AL139317.1-201ENST00000554548 MTRRQ9UBK8 725 aa12.67□□□□□ -0.38
AL139317.1-201ENST00000554548 ANAPC7Q9UJX3 599 aa12.67□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms