RNA–Protein interactions for RNA: ENST00000554514.1

ARHGEF40-203, Transcript of Rho guanine nucleotide exchange factor 40, humanhuman

TSL 1 (best)

Gene ARHGEF40, Length 2,928 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF40-203ENST00000554514 UTP4Q969X6 686 aaKnown RBP16.36■□□□□ 0.21
ARHGEF40-203ENST00000554514 SERAC1Q96JX3 654 aa16.36■□□□□ 0.21
ARHGEF40-203ENST00000554514 EFR3BQ9Y2G0 817 aa16.36■□□□□ 0.21
ARHGEF40-203ENST00000554514 ANK1P16157 1881 aa16.36■□□□□ 0.21
ARHGEF40-203ENST00000554514 NDC80O14777 642 aa16.36■□□□□ 0.21
ARHGEF40-203ENST00000554514 CLGNO14967 610 aa16.36■□□□□ 0.21
ARHGEF40-203ENST00000554514 DIAPH2O60879 1101 aa16.36■□□□□ 0.21
ARHGEF40-203ENST00000554514 HMGCRP04035 888 aa16.36■□□□□ 0.21
ARHGEF40-203ENST00000554514 CCNB1P14635 433 aa16.36■□□□□ 0.21
ARHGEF40-203ENST00000554514 ZNF143P52747 638 aaPredicted RBP16.36■□□□□ 0.21
ARHGEF40-203ENST00000554514 TMEM62Q0P6H9 643 aa16.36■□□□□ 0.21
ARHGEF40-203ENST00000554514 RIPK1Q13546 671 aa16.36■□□□□ 0.21
ARHGEF40-203ENST00000554514 AMHR2Q16671 573 aa16.36■□□□□ 0.21
ARHGEF40-203ENST00000554514 ILDR2Q71H61 639 aa16.36■□□□□ 0.21
ARHGEF40-203ENST00000554514 CCDC125Q86Z20 511 aa16.36■□□□□ 0.21
ARHGEF40-203ENST00000554514 EXOC8Q8IYI6 725 aa16.36■□□□□ 0.21
ARHGEF40-203ENST00000554514 KIF12Q96FN5 646 aa16.36■□□□□ 0.21
ARHGEF40-203ENST00000554514 TRIM56Q9BRZ2 755 aaKnown RBP16.36■□□□□ 0.21
ARHGEF40-203ENST00000554514 ZMYND8Q9ULU4 1186 aaPredicted RBP16.36■□□□□ 0.21
ARHGEF40-203ENST00000554514 LOC102724159A0A0B4J2E5 919 aa16.35■□□□□ 0.21
ARHGEF40-203ENST00000554514 C2orf71A6NGG8 1288 aa16.35■□□□□ 0.21
ARHGEF40-203ENST00000554514 PYGBP11216 843 aa16.35■□□□□ 0.21
ARHGEF40-203ENST00000554514 VDRP11473 427 aa16.35■□□□□ 0.21
ARHGEF40-203ENST00000554514 P4HA1P13674 534 aa16.35■□□□□ 0.21
ARHGEF40-203ENST00000554514 YARSP54577 528 aaKnown RBP16.35■□□□□ 0.21
ARHGEF40-203ENST00000554514 PWP2Q15269 919 aaKnown RBP16.35■□□□□ 0.21
ARHGEF40-203ENST00000554514 PLEKHG4Q58EX7 1191 aa16.35■□□□□ 0.21
ARHGEF40-203ENST00000554514 CCDC62Q6P9F0 684 aa16.35■□□□□ 0.21
ARHGEF40-203ENST00000554514 ACOT1Q86TX2 421 aa16.35■□□□□ 0.21
ARHGEF40-203ENST00000554514 PRPF39Q86UA1 669 aaKnown RBP16.35■□□□□ 0.21
ARHGEF40-203ENST00000554514 SCUBE3Q8IX30 993 aa16.35■□□□□ 0.21
ARHGEF40-203ENST00000554514 PPM1NQ8N819 430 aa16.35■□□□□ 0.21
ARHGEF40-203ENST00000554514 DCPSQ96C86 337 aaKnown RBP16.35■□□□□ 0.21
ARHGEF40-203ENST00000554514 CYTH2Q99418 400 aa16.35■□□□□ 0.21
ARHGEF40-203ENST00000554514 DPP3Q9NY33 737 aa16.35■□□□□ 0.21
ARHGEF40-203ENST00000554514 ERAP1Q9NZ08 941 aa16.35■□□□□ 0.21
ARHGEF40-203ENST00000554514 ZFP69BQ9UJL9 534 aa16.35■□□□□ 0.21
ARHGEF40-203ENST00000554514 DCTN3O75935 186 aa16.35■□□□□ 0.21
ARHGEF40-203ENST00000554514 RBL1P28749 1068 aa16.35■□□□□ 0.21
ARHGEF40-203ENST00000554514 TTLL4Q14679 1199 aa16.35■□□□□ 0.21
ARHGEF40-203ENST00000554514 CA9Q16790 459 aa16.35■□□□□ 0.21
ARHGEF40-203ENST00000554514 CNPY3Q9BT09 278 aa16.35■□□□□ 0.21
ARHGEF40-203ENST00000554514 B3GNT5Q9BYG0 378 aa16.35■□□□□ 0.21
ARHGEF40-203ENST00000554514 MAGEB5Q9BZ81 275 aa16.35■□□□□ 0.21
ARHGEF40-203ENST00000554514 MANSC1Q9H8J5 431 aa16.35■□□□□ 0.21
ARHGEF40-203ENST00000554514 A0A0G2JLL6 359 aaPredicted RBP16.35■□□□□ 0.21
ARHGEF40-203ENST00000554514 C2CD4BA6NLJ0 364 aa16.35■□□□□ 0.21
ARHGEF40-203ENST00000554514 APRTP07741 180 aa16.35■□□□□ 0.21
ARHGEF40-203ENST00000554514 EPHB2P29323 1055 aa16.35■□□□□ 0.21
ARHGEF40-203ENST00000554514 ELF1P32519 619 aa16.35■□□□□ 0.21
ARHGEF40-203ENST00000554514 ZNF200P98182 395 aaPredicted RBP16.35■□□□□ 0.21
ARHGEF40-203ENST00000554514 CCDC15Q0P6D6 951 aa16.35■□□□□ 0.21
ARHGEF40-203ENST00000554514 NOMO1Q15155 1222 aa16.35■□□□□ 0.21
ARHGEF40-203ENST00000554514 SMAD1Q15797 465 aaKnown RBP16.35■□□□□ 0.21
ARHGEF40-203ENST00000554514 TAZQ16635 292 aa16.35■□□□□ 0.21
ARHGEF40-203ENST00000554514 PRRT2Q7Z6L0 340 aaPredicted RBP16.35■□□□□ 0.21
ARHGEF40-203ENST00000554514 GPC2Q8N158 579 aa16.35■□□□□ 0.21
ARHGEF40-203ENST00000554514 BANPQ8N9N5 519 aa16.35■□□□□ 0.21
ARHGEF40-203ENST00000554514 MZB1Q8WU39 189 aa16.35■□□□□ 0.21
ARHGEF40-203ENST00000554514 LBHD1Q9BQE6 289 aaPredicted RBP16.35■□□□□ 0.21
ARHGEF40-203ENST00000554514 CXorf56Q9H5V9 222 aa16.35■□□□□ 0.21
ARHGEF40-203ENST00000554514 BARX2Q9UMQ3 279 aaPredicted RBP16.35■□□□□ 0.21
ARHGEF40-203ENST00000554514 NUMBLQ9Y6R0 609 aa16.35■□□□□ 0.21
ARHGEF40-203ENST00000554514 E7ESA3 106 aa16.34■□□□□ 0.21
ARHGEF40-203ENST00000554514 PPEF2O14830 753 aa16.34■□□□□ 0.21
ARHGEF40-203ENST00000554514 HCRTO43612 131 aa16.34■□□□□ 0.21
ARHGEF40-203ENST00000554514 CDC25CP30307 473 aa16.34■□□□□ 0.21
ARHGEF40-203ENST00000554514 R3HDM1Q15032 1099 aaKnown RBP16.34■□□□□ 0.21
ARHGEF40-203ENST00000554514 PPP1R26Q5T8A7 1209 aaPredicted RBP16.34■□□□□ 0.21
ARHGEF40-203ENST00000554514 CYP4V2Q6ZWL3 525 aaPredicted RBP16.34■□□□□ 0.21
ARHGEF40-203ENST00000554514 LONP2Q86WA8 852 aa16.34■□□□□ 0.21
ARHGEF40-203ENST00000554514 AGGF1Q8N302 714 aaeCLIP16.34■□□□□ 0.21
ARHGEF40-203ENST00000554514 C7orf31Q8N865 590 aa16.34■□□□□ 0.21
ARHGEF40-203ENST00000554514 CXorf38Q8TB03 319 aa16.34■□□□□ 0.21
ARHGEF40-203ENST00000554514 CCDC110Q8TBZ0 833 aa16.34■□□□□ 0.21
ARHGEF40-203ENST00000554514 FAM172AQ8WUF8 416 aa16.34■□□□□ 0.21
ARHGEF40-203ENST00000554514 RAB3IPQ96QF0 476 aaPredicted RBP16.34■□□□□ 0.21
ARHGEF40-203ENST00000554514 PPME1Q9Y570 386 aa16.34■□□□□ 0.21
ARHGEF40-203ENST00000554514 SNX9Q9Y5X1 595 aa16.34■□□□□ 0.21
ARHGEF40-203ENST00000554514 NR2E3Q9Y5X4 410 aa16.34■□□□□ 0.21
ARHGEF40-203ENST00000554514 LTBP3Q9NS15 1303 aa16.34■□□□□ 0.21
ARHGEF40-203ENST00000554514 PAPPA2Q9BXP8 1791 aa16.34■□□□□ 0.21
ARHGEF40-203ENST00000554514 PTPRFP10586 1907 aa16.34■□□□□ 0.21
ARHGEF40-203ENST00000554514 ZBED1O96006 694 aa16.34■□□□□ 0.21
ARHGEF40-203ENST00000554514 LGALS2P05162 132 aa16.34■□□□□ 0.21
ARHGEF40-203ENST00000554514 TROVE2P10155 538 aaKnown RBP eCLIP16.34■□□□□ 0.21
ARHGEF40-203ENST00000554514 TFE3P19532 575 aaPredicted RBP16.34■□□□□ 0.21
ARHGEF40-203ENST00000554514 BGNP21810 368 aa16.34■□□□□ 0.21
ARHGEF40-203ENST00000554514 ATXN1P54253 815 aaKnown RBP16.34■□□□□ 0.21
ARHGEF40-203ENST00000554514 BCAR1P56945 870 aa16.34■□□□□ 0.21
ARHGEF40-203ENST00000554514 CCDC14Q49A88 953 aa16.34■□□□□ 0.21
ARHGEF40-203ENST00000554514 GLRA4Q5JXX5 417 aa16.34■□□□□ 0.21
ARHGEF40-203ENST00000554514 PMF1Q6P1K2 205 aa16.34■□□□□ 0.21
ARHGEF40-203ENST00000554514 L3MBTL3Q96JM7 780 aaPredicted RBP16.34■□□□□ 0.21
ARHGEF40-203ENST00000554514 NT5C1AQ9BXI3 368 aa16.34■□□□□ 0.21
ARHGEF40-203ENST00000554514 FRMD8P1Q9BZ68 369 aaPredicted RBP16.34■□□□□ 0.21
ARHGEF40-203ENST00000554514 SLC25A27O95847 323 aa16.33■□□□□ 0.21
ARHGEF40-203ENST00000554514 MCF2P10911 925 aa16.33■□□□□ 0.21
ARHGEF40-203ENST00000554514 GABRB2P47870 512 aa16.33■□□□□ 0.21
ARHGEF40-203ENST00000554514 IREB2P48200 963 aaKnown RBP16.33■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms