RNA–Protein interactions for RNA: ENST00000554491.5

ATXN3-227, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 1,064 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-227ENST00000554491 ENO4A6NNW6 628 aa4.79□□□□□ -1.64
ATXN3-227ENST00000554491 M0R2C6 588 aa4.79□□□□□ -1.64
ATXN3-227ENST00000554491 SPTLC2O15270 562 aa4.79□□□□□ -1.64
ATXN3-227ENST00000554491 MGEA5O60502 916 aa4.79□□□□□ -1.64
ATXN3-227ENST00000554491 GLRX3O76003 335 aaKnown RBP4.79□□□□□ -1.64
ATXN3-227ENST00000554491 ERLIN2O94905 339 aa4.79□□□□□ -1.64
ATXN3-227ENST00000554491 NPTXRO95502 500 aa4.79□□□□□ -1.64
ATXN3-227ENST00000554491 TROVE2P10155 538 aaKnown RBP eCLIP4.79□□□□□ -1.64
ATXN3-227ENST00000554491 HNRNPLP14866 589 aaKnown RBP eCLIP4.79□□□□□ -1.64
ATXN3-227ENST00000554491 EN2P19622 333 aaPredicted RBP4.79□□□□□ -1.64
ATXN3-227ENST00000554491 NR4A1P22736 598 aa4.79□□□□□ -1.64
ATXN3-227ENST00000554491 PROZP22891 400 aa4.79□□□□□ -1.64
ATXN3-227ENST00000554491 PPP2R1AP30153 589 aa4.79□□□□□ -1.64
ATXN3-227ENST00000554491 PLA2G5P39877 138 aa4.79□□□□□ -1.64
ATXN3-227ENST00000554491 FNTAP49354 379 aa4.79□□□□□ -1.64
ATXN3-227ENST00000554491 FNTBP49356 437 aa4.79□□□□□ -1.64
ATXN3-227ENST00000554491 CLNS1AP54105 237 aaKnown RBP4.79□□□□□ -1.64
ATXN3-227ENST00000554491 PHEXP78562 749 aa4.79□□□□□ -1.64
ATXN3-227ENST00000554491 SMAD3P84022 425 aaKnown RBP4.79□□□□□ -1.64
ATXN3-227ENST00000554491 ITIH3Q06033 890 aa4.79□□□□□ -1.64
ATXN3-227ENST00000554491 PPIDQ08752 370 aaKnown RBP4.79□□□□□ -1.64
ATXN3-227ENST00000554491 UBE4AQ14139 1066 aa4.79□□□□□ -1.64
ATXN3-227ENST00000554491 BTG3Q14201 252 aaPredicted RBP4.79□□□□□ -1.64
ATXN3-227ENST00000554491 INAQ16352 499 aa4.79□□□□□ -1.64
ATXN3-227ENST00000554491 USH1GQ495M9 461 aa4.79□□□□□ -1.64
ATXN3-227ENST00000554491 GAGE13Q4V321 117 aa4.79□□□□□ -1.64
ATXN3-227ENST00000554491 RABL3Q5HYI8 236 aa4.79□□□□□ -1.64
ATXN3-227ENST00000554491 MBNL2Q5VZF2 373 aaKnown RBP4.79□□□□□ -1.64
ATXN3-227ENST00000554491 CREB3L3Q68CJ9 461 aa4.79□□□□□ -1.64
ATXN3-227ENST00000554491 NXNQ6DKJ4 435 aa4.79□□□□□ -1.64
ATXN3-227ENST00000554491 ISM2Q6H9L7 571 aa4.79□□□□□ -1.64
ATXN3-227ENST00000554491 THOC7Q6I9Y2 204 aaKnown RBP4.79□□□□□ -1.64
ATXN3-227ENST00000554491 ZNF530Q6P9A1 599 aaPredicted RBP4.79□□□□□ -1.64
ATXN3-227ENST00000554491 IQCA1Q86XH1 822 aa4.79□□□□□ -1.64
ATXN3-227ENST00000554491 NIM1KQ8IY84 436 aa4.79□□□□□ -1.64
ATXN3-227ENST00000554491 PLA2G15Q8NCC3 412 aa4.79□□□□□ -1.64
ATXN3-227ENST00000554491 EXOC6Q8TAG9 804 aa4.79□□□□□ -1.64
ATXN3-227ENST00000554491 NUP133Q8WUM0 1156 aa4.79□□□□□ -1.64
ATXN3-227ENST00000554491 SLC25A43Q8WUT9 341 aaPredicted RBP4.79□□□□□ -1.64
ATXN3-227ENST00000554491 ATXN2LQ8WWM7 1075 aaKnown RBP4.79□□□□□ -1.64
ATXN3-227ENST00000554491 ZNF75CPQ92670 426 aaPredicted RBP4.79□□□□□ -1.64
ATXN3-227ENST00000554491 HAS1Q92839 578 aa4.79□□□□□ -1.64
ATXN3-227ENST00000554491 TBC1D31Q96DN5 1066 aa4.79□□□□□ -1.64
ATXN3-227ENST00000554491 DYDC2Q96IM9 177 aa4.79□□□□□ -1.64
ATXN3-227ENST00000554491 ZNF496Q96IT1 587 aaPredicted RBP4.79□□□□□ -1.64
ATXN3-227ENST00000554491 C8orf76Q96K31 380 aa4.79□□□□□ -1.64
ATXN3-227ENST00000554491 WDR92Q96MX6 357 aa4.79□□□□□ -1.64
ATXN3-227ENST00000554491 MNTQ99583 582 aa4.79□□□□□ -1.64
ATXN3-227ENST00000554491 MLST8Q9BVC4 326 aa4.79□□□□□ -1.64
ATXN3-227ENST00000554491 MRPL4Q9BYD3 311 aaKnown RBP4.79□□□□□ -1.64
ATXN3-227ENST00000554491 UBXN6Q9BZV1 441 aa4.79□□□□□ -1.64
ATXN3-227ENST00000554491 ABCG4Q9H172 646 aa4.79□□□□□ -1.64
ATXN3-227ENST00000554491 BHMT2Q9H2M3 363 aa4.79□□□□□ -1.64
ATXN3-227ENST00000554491 PRO3102Q9H379 93 aa4.79□□□□□ -1.64
ATXN3-227ENST00000554491 KCMF1Q9P0J7 381 aa4.79□□□□□ -1.64
ATXN3-227ENST00000554491 FRMD4AQ9P2Q2 1039 aaPredicted RBP4.79□□□□□ -1.64
ATXN3-227ENST00000554491 TUBGCP4Q9UGJ1 667 aa4.79□□□□□ -1.64
ATXN3-227ENST00000554491 TBK1Q9UHD2 729 aa4.79□□□□□ -1.64
ATXN3-227ENST00000554491 TRPS1Q9UHF7 1281 aa4.79□□□□□ -1.64
ATXN3-227ENST00000554491 GTF3C4Q9UKN8 822 aa4.79□□□□□ -1.64
ATXN3-227ENST00000554491 PAIP2BQ9ULR5 123 aaKnown RBP4.79□□□□□ -1.64
ATXN3-227ENST00000554491 ALPK3Q96L96 1907 aa4.79□□□□□ -1.64
ATXN3-227ENST00000554491 SPTBN5Q9NRC6 3674 aaKnown RBP4.79□□□□□ -1.64
ATXN3-227ENST00000554491 RIC1Q4ADV7 1423 aa4.79□□□□□ -1.64
ATXN3-227ENST00000554491 TTC28Q96AY4 2481 aa4.79□□□□□ -1.64
ATXN3-227ENST00000554491 RPAP1Q9BWH6 1393 aaPredicted RBP4.78□□□□□ -1.64
ATXN3-227ENST00000554491 LRRC37AA6NMS7 1700 aa4.78□□□□□ -1.64
ATXN3-227ENST00000554491 TAF1P21675 1872 aa4.78□□□□□ -1.64
ATXN3-227ENST00000554491 PCSK5Q92824 1860 aa4.78□□□□□ -1.64
ATXN3-227ENST00000554491 A0A0B4J203 849 aa4.78□□□□□ -1.64
ATXN3-227ENST00000554491 TMEM191CA6NGB0 347 aa4.78□□□□□ -1.64
ATXN3-227ENST00000554491 GRXCR1A8MXD5 290 aa4.78□□□□□ -1.64
ATXN3-227ENST00000554491 C19orf81C9J6K1 198 aa4.78□□□□□ -1.64
ATXN3-227ENST00000554491 M0QX08 132 aa4.78□□□□□ -1.64
ATXN3-227ENST00000554491 FOXN3O00409 490 aaPredicted RBP4.78□□□□□ -1.64
ATXN3-227ENST00000554491 CPLX1O14810 134 aa4.78□□□□□ -1.64
ATXN3-227ENST00000554491 NEMFO60524 1076 aa4.78□□□□□ -1.64
ATXN3-227ENST00000554491 STC2O76061 302 aa4.78□□□□□ -1.64
ATXN3-227ENST00000554491 MBD4O95243 580 aa4.78□□□□□ -1.64
ATXN3-227ENST00000554491 PENKP01210 267 aaPredicted RBP4.78□□□□□ -1.64
ATXN3-227ENST00000554491 VSIG10L2P0DP72 767 aa4.78□□□□□ -1.64
ATXN3-227ENST00000554491 BTF3P20290 206 aaKnown RBP4.78□□□□□ -1.64
ATXN3-227ENST00000554491 PTX3P26022 381 aaPredicted RBP4.78□□□□□ -1.64
ATXN3-227ENST00000554491 PTGS2P35354 604 aa4.78□□□□□ -1.64
ATXN3-227ENST00000554491 GMPSP49915 693 aaPredicted RBP4.78□□□□□ -1.64
ATXN3-227ENST00000554491 PEX5P50542 639 aa4.78□□□□□ -1.64
ATXN3-227ENST00000554491 UBXN2AP68543 259 aa4.78□□□□□ -1.64
ATXN3-227ENST00000554491 SLFN5Q08AF3 891 aa4.78□□□□□ -1.64
ATXN3-227ENST00000554491 DMPKQ09013 629 aa4.78□□□□□ -1.64
ATXN3-227ENST00000554491 IKQ13123 557 aaPredicted RBP4.78□□□□□ -1.64
ATXN3-227ENST00000554491 DYNC1I2Q13409 638 aaKnown RBP4.78□□□□□ -1.64
ATXN3-227ENST00000554491 CCDC14Q49A88 953 aa4.78□□□□□ -1.64
ATXN3-227ENST00000554491 PRAMEF9Q5VWM5 478 aa4.78□□□□□ -1.64
ATXN3-227ENST00000554491 KAZNQ674X7 775 aa4.78□□□□□ -1.64
ATXN3-227ENST00000554491 KRT40Q6A162 431 aa4.78□□□□□ -1.64
ATXN3-227ENST00000554491 DPY19L2P1Q6NXN4 242 aa4.78□□□□□ -1.64
ATXN3-227ENST00000554491 IRGCQ6NXR0 463 aa4.78□□□□□ -1.64
ATXN3-227ENST00000554491 FIP1L1Q6UN15 594 aaKnown RBP4.78□□□□□ -1.64
ATXN3-227ENST00000554491 DLK2Q6UY11 383 aa4.78□□□□□ -1.64
ATXN3-227ENST00000554491 RHOUQ7L0Q8 258 aa4.78□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms